RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PPARGC1BQ86YN6 1023 aaKnown RBP6.58□□□□□ -1.36
LRCH3-217ENST00000483442 OXCT2Q9BYC2 517 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-217ENST00000483442 NDFIP2Q9NV92 336 aa6.58□□□□□ -1.36
LRCH3-217ENST00000483442 PIK3CDO00329 1044 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 BNIP3LO60238 219 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 CTBSQ01459 385 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 TLR1Q15399 786 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 PLA2G4EQ3MJ16 856 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 GNASQ5JWF2 1037 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 RHBDD1Q8TEB9 315 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
LRCH3-217ENST00000483442 USP3Q9Y6I4 520 aa6.57□□□□□ -1.36
LRCH3-217ENST00000483442 INHAP05111 366 aa6.56□□□□□ -1.36
LRCH3-217ENST00000483442 HOXB4P17483 251 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-217ENST00000483442 GDF10P55107 478 aa6.56□□□□□ -1.36
LRCH3-217ENST00000483442 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
LRCH3-217ENST00000483442 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
LRCH3-217ENST00000483442 SYNJ2O15056 1496 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 TMEM229AB2RXF0 380 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 ATP4AP20648 1035 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 PLA2G4AP47712 749 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 BEND7Q8N7W2 519 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-217ENST00000483442 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 GALNT6Q8NCL4 622 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 SERTAD1Q9UHV2 236 aa6.55□□□□□ -1.36
LRCH3-217ENST00000483442 MAGI1Q96QZ7 1491 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-217ENST00000483442 PRKCSHP14314 528 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-217ENST00000483442 MAP2K3P46734 347 aa6.54□□□□□ -1.36
LRCH3-217ENST00000483442 MCM6Q14566 821 aa6.54□□□□□ -1.36
LRCH3-217ENST00000483442 CRISPLD1Q9H336 500 aa6.54□□□□□ -1.36
LRCH3-217ENST00000483442 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
LRCH3-217ENST00000483442 NSFL1CQ9UNZ2 370 aaKnown RBP6.54□□□□□ -1.36
LRCH3-217ENST00000483442 PRDM2Q13029 1718 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 ERCC6L2Q5T890 1561 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 PHF20L1A8MW92 1017 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 IGHA1P01876 353 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 CSB-PGBD3P0DP91 1061 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 SMTNP53814 917 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 PGBD3Q8N328 593 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
LRCH3-217ENST00000483442 PRM3Q9NNZ6 103 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-217ENST00000483442 PCDHGA11Q9Y5H2 935 aa6.53□□□□□ -1.36
LRCH3-217ENST00000483442 KRBA1A5PL33 1030 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 PROCP04070 461 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 FGFR3P22607 806 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 COL8A1P27658 744 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-217ENST00000483442 FOXK2Q01167 660 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 EDARADDQ8WWZ3 215 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 ATXN7L1Q9ULK2 861 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-217ENST00000483442 COG6Q9Y2V7 657 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 FGD5Q6ZNL6 1462 aa6.52□□□□□ -1.37
LRCH3-217ENST00000483442 BMP4P12644 408 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 LBRQ14739 615 aaKnown RBP6.51□□□□□ -1.37
LRCH3-217ENST00000483442 WASHC4Q2M389 1173 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 MAP7D1Q3KQU3 841 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 EFHC2Q5JST6 749 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 LINC00114Q6XXX2 140 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 PODNQ7Z5L7 613 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 AIDAQ96BJ3 306 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 KLF15Q9UIH9 416 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 GGA1Q9UJY5 639 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
LRCH3-217ENST00000483442 MTFR1Q15390 333 aa6.5□□□□□ -1.37
LRCH3-217ENST00000483442 SIRT1Q96EB6 747 aa6.5□□□□□ -1.37
LRCH3-217ENST00000483442 SLC4A9Q96Q91 983 aa6.5□□□□□ -1.37
LRCH3-217ENST00000483442 ALG2Q9H553 416 aa6.5□□□□□ -1.37
LRCH3-217ENST00000483442 PARP3Q9Y6F1 533 aa6.5□□□□□ -1.37
LRCH3-217ENST00000483442 A6NJY4 79 aa6.49□□□□□ -1.37
LRCH3-217ENST00000483442 MSTNO14793 375 aa6.49□□□□□ -1.37
LRCH3-217ENST00000483442 FBXO41Q8TF61 875 aa6.49□□□□□ -1.37
LRCH3-217ENST00000483442 NIFKQ9BYG3 293 aaKnown RBP6.49□□□□□ -1.37
LRCH3-217ENST00000483442 RRAGCQ9HB90 399 aa6.49□□□□□ -1.37
LRCH3-217ENST00000483442 GDF2Q9UK05 429 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-217ENST00000483442 A0A1W2PNR3 127 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 DCDC2BA2VCK2 349 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 TNP2Q05952 138 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 ZDHHC1Q8WTX9 485 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 BTBD6Q96KE9 485 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 PCDHGC4Q9Y5F7 938 aa6.48□□□□□ -1.37
LRCH3-217ENST00000483442 ABCC10Q5T3U5 1492 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 NEURL1BA8MQ27 555 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 ATXN7O15265 892 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-217ENST00000483442 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
LRCH3-217ENST00000483442 EPXP11678 715 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 SKIP12755 728 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 CD33P20138 364 aa6.47□□□□□ -1.37
LRCH3-217ENST00000483442 TXLNAP40222 546 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms