RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PTGER2P43116 358 aa21.7■■□□□ 1.06
HMGN1-214ENST00000482733 FAM9BQ8IZU0 186 aa21.7■■□□□ 1.06
HMGN1-214ENST00000482733 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
HMGN1-214ENST00000482733 TUBGCP6Q96RT7 1819 aa21.7■■□□□ 1.06
HMGN1-214ENST00000482733 EIF4A1P60842 406 aaKnown RBP21.69■■□□□ 1.06
HMGN1-214ENST00000482733 ARHGEF1Q92888 912 aaKnown RBP21.69■■□□□ 1.06
HMGN1-214ENST00000482733 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
HMGN1-214ENST00000482733 RFC4P35249 363 aa21.68■■□□□ 1.06
HMGN1-214ENST00000482733 CCDC27Q2M243 656 aa21.68■■□□□ 1.06
HMGN1-214ENST00000482733 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
HMGN1-214ENST00000482733 SGIP1Q9BQI5 828 aa21.68■■□□□ 1.06
HMGN1-214ENST00000482733 ZBTB1Q9Y2K1 713 aa21.68■■□□□ 1.06
HMGN1-214ENST00000482733 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
HMGN1-214ENST00000482733 CHL1O00533 1208 aa21.67■■□□□ 1.06
HMGN1-214ENST00000482733 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
HMGN1-214ENST00000482733 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-214ENST00000482733 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
HMGN1-214ENST00000482733 USP16Q9Y5T5 823 aa21.65■■□□□ 1.06
HMGN1-214ENST00000482733 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.06
HMGN1-214ENST00000482733 A0A087WZG4 1122 aa21.64■■□□□ 1.05
HMGN1-214ENST00000482733 IL6STP40189 918 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-214ENST00000482733 NPM2Q86SE8 214 aaKnown RBP21.64■■□□□ 1.05
HMGN1-214ENST00000482733 NGEFQ8N5V2 710 aa21.64■■□□□ 1.05
HMGN1-214ENST00000482733 ARXQ96QS3 562 aa21.64■■□□□ 1.05
HMGN1-214ENST00000482733 IFT57Q9NWB7 429 aa21.64■■□□□ 1.05
HMGN1-214ENST00000482733 LAS1LQ9Y4W2 734 aaKnown RBP21.64■■□□□ 1.05
HMGN1-214ENST00000482733 MYH14Q7Z406 1995 aaKnown RBP21.63■■□□□ 1.05
HMGN1-214ENST00000482733 PRAMEF22A3QJZ6 481 aa21.63■■□□□ 1.05
HMGN1-214ENST00000482733 EIF5P55010 431 aaKnown RBP21.63■■□□□ 1.05
HMGN1-214ENST00000482733 GNAI1P63096 354 aa21.63■■□□□ 1.05
HMGN1-214ENST00000482733 MSL1Q68DK7 614 aa21.63■■□□□ 1.05
HMGN1-214ENST00000482733 NLGN1Q8N2Q7 840 aa21.63■■□□□ 1.05
HMGN1-214ENST00000482733 COL15A1P39059 1388 aa21.62■■□□□ 1.05
HMGN1-214ENST00000482733 ZPR1O75312 459 aa21.62■■□□□ 1.05
HMGN1-214ENST00000482733 A1BGP04217 495 aa21.62■■□□□ 1.05
HMGN1-214ENST00000482733 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
HMGN1-214ENST00000482733 ZNF853P0CG23 659 aa21.61■■□□□ 1.05
HMGN1-214ENST00000482733 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
HMGN1-214ENST00000482733 GYS1P13807 737 aa21.6■■□□□ 1.05
HMGN1-214ENST00000482733 NARFQ9UHQ1 456 aa21.6■■□□□ 1.05
HMGN1-214ENST00000482733 COL24A1Q17RW2 1714 aa21.59■■□□□ 1.05
HMGN1-214ENST00000482733 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
HMGN1-214ENST00000482733 IL16Q14005 1332 aa21.57■■□□□ 1.04
HMGN1-214ENST00000482733 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
HMGN1-214ENST00000482733 SRP68Q9UHB9 627 aaKnown RBP21.57■■□□□ 1.04
HMGN1-214ENST00000482733 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
HMGN1-214ENST00000482733 HOXB7P09629 217 aa21.56■■□□□ 1.04
HMGN1-214ENST00000482733 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
HMGN1-214ENST00000482733 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
HMGN1-214ENST00000482733 MIER1Q8N108 512 aa21.56■■□□□ 1.04
HMGN1-214ENST00000482733 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
HMGN1-214ENST00000482733 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
HMGN1-214ENST00000482733 MMP10P09238 476 aa21.55■■□□□ 1.04
HMGN1-214ENST00000482733 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
HMGN1-214ENST00000482733 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
HMGN1-214ENST00000482733 FHDC1Q9C0D6 1143 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-214ENST00000482733 FKBP8Q14318 412 aa21.54■■□□□ 1.04
HMGN1-214ENST00000482733 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
HMGN1-214ENST00000482733 C4AP0C0L4 1744 aa21.53■■□□□ 1.04
HMGN1-214ENST00000482733 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
HMGN1-214ENST00000482733 PIP4K2AP48426 406 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-214ENST00000482733 DZIP3Q86Y13 1208 aaKnown RBP21.53■■□□□ 1.04
HMGN1-214ENST00000482733 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
HMGN1-214ENST00000482733 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
HMGN1-214ENST00000482733 SYT17Q9BSW7 474 aa21.52■■□□□ 1.04
HMGN1-214ENST00000482733 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
HMGN1-214ENST00000482733 PARP3Q9Y6F1 533 aa21.52■■□□□ 1.04
HMGN1-214ENST00000482733 RGL2O15211 777 aa21.51■■□□□ 1.03
HMGN1-214ENST00000482733 KRT24Q2M2I5 525 aa21.51■■□□□ 1.03
HMGN1-214ENST00000482733 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
HMGN1-214ENST00000482733 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
HMGN1-214ENST00000482733 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
HMGN1-214ENST00000482733 TM4SF1P30408 202 aa21.5■■□□□ 1.03
HMGN1-214ENST00000482733 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
HMGN1-214ENST00000482733 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
HMGN1-214ENST00000482733 HDGFL1Q5TGJ6 251 aa21.49■■□□□ 1.03
HMGN1-214ENST00000482733 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
HMGN1-214ENST00000482733 MYL6BP14649 208 aa21.48■■□□□ 1.03
HMGN1-214ENST00000482733 CLEC4GQ6UXB4 293 aa21.48■■□□□ 1.03
HMGN1-214ENST00000482733 NFIXQ14938 502 aa21.47■■□□□ 1.03
HMGN1-214ENST00000482733 KIF6Q6ZMV9 814 aa21.47■■□□□ 1.03
HMGN1-214ENST00000482733 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
HMGN1-214ENST00000482733 POLRMTO00411 1230 aaKnown RBP21.46■■□□□ 1.03
HMGN1-214ENST00000482733 DDR1Q08345 913 aa21.46■■□□□ 1.03
HMGN1-214ENST00000482733 PDIA6Q15084 440 aa21.46■■□□□ 1.03
HMGN1-214ENST00000482733 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
HMGN1-214ENST00000482733 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
HMGN1-214ENST00000482733 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
HMGN1-214ENST00000482733 C8orf58Q8NAV2 365 aa21.45■■□□□ 1.02
HMGN1-214ENST00000482733 NECTIN2Q92692 538 aa21.45■■□□□ 1.02
HMGN1-214ENST00000482733 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-214ENST00000482733 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
HMGN1-214ENST00000482733 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
HMGN1-214ENST00000482733 GOLGA2Q08379 1002 aa21.44■■□□□ 1.02
HMGN1-214ENST00000482733 TBC1D9BQ66K14 1250 aa21.44■■□□□ 1.02
HMGN1-214ENST00000482733 LRP10Q7Z4F1 713 aa21.44■■□□□ 1.02
HMGN1-214ENST00000482733 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
HMGN1-214ENST00000482733 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-214ENST00000482733 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
HMGN1-214ENST00000482733 SETDB2Q96T68 719 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms