RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 NLGN2Q8NFZ4 835 aa27.22■■□□□ 1.95
PTPN18-211ENST00000481492 PRAMEF22A3QJZ6 481 aa27.21■■□□□ 1.95
PTPN18-211ENST00000481492 TMPOP42166 694 aaKnown RBP27.21■■□□□ 1.95
PTPN18-211ENST00000481492 RIPK4P57078 832 aa27.19■■□□□ 1.94
PTPN18-211ENST00000481492 WDR43Q15061 677 aaKnown RBP eCLIP27.19■■□□□ 1.94
PTPN18-211ENST00000481492 RRP7AQ9Y3A4 280 aaKnown RBP27.19■■□□□ 1.94
PTPN18-211ENST00000481492 STARD3NLO95772 234 aa27.18■■□□□ 1.94
PTPN18-211ENST00000481492 MMP10P09238 476 aa27.18■■□□□ 1.94
PTPN18-211ENST00000481492 NLGN1Q8N2Q7 840 aa27.18■■□□□ 1.94
PTPN18-211ENST00000481492 ZNF784Q8NCA9 323 aaPredicted RBP27.18■■□□□ 1.94
PTPN18-211ENST00000481492 USP16Q9Y5T5 823 aa27.18■■□□□ 1.94
PTPN18-211ENST00000481492 USP42Q9H9J4 1324 aaKnown RBP27.17■■□□□ 1.94
PTPN18-211ENST00000481492 A1BGP04217 495 aa27.17■■□□□ 1.94
PTPN18-211ENST00000481492 CANXP27824 592 aaKnown RBP27.17■■□□□ 1.94
PTPN18-211ENST00000481492 RUNDC1Q96C34 613 aa27.17■■□□□ 1.94
PTPN18-211ENST00000481492 TEX13AQ9BXU3 409 aaPredicted RBP27.17■■□□□ 1.94
PTPN18-211ENST00000481492 C4AP0C0L4 1744 aa27.17■■□□□ 1.94
PTPN18-211ENST00000481492 FKBP8Q14318 412 aa27.16■■□□□ 1.94
PTPN18-211ENST00000481492 EIF5P55010 431 aaKnown RBP27.15■■□□□ 1.94
PTPN18-211ENST00000481492 CD2APQ9Y5K6 639 aa27.14■■□□□ 1.94
PTPN18-211ENST00000481492 SNRPA1P09661 255 aaKnown RBP27.12■■□□□ 1.93
PTPN18-211ENST00000481492 NEUROD2Q15784 382 aa27.12■■□□□ 1.93
PTPN18-211ENST00000481492 USPL1Q5W0Q7 1092 aa27.12■■□□□ 1.93
PTPN18-211ENST00000481492 BCL2L12Q9HB09 334 aa27.12■■□□□ 1.93
PTPN18-211ENST00000481492 TRIM35Q9UPQ4 493 aa27.12■■□□□ 1.93
PTPN18-211ENST00000481492 COL15A1P39059 1388 aa27.12■■□□□ 1.93
PTPN18-211ENST00000481492 NARFQ9UHQ1 456 aa27.11■■□□□ 1.93
PTPN18-211ENST00000481492 DCAF8L1A6NGE4 600 aa27.1■■□□□ 1.93
PTPN18-211ENST00000481492 EIF4A1P60842 406 aaKnown RBP27.1■■□□□ 1.93
PTPN18-211ENST00000481492 PNISRQ8TF01 805 aaKnown RBP27.1■■□□□ 1.93
PTPN18-211ENST00000481492 TM4SF1P30408 202 aa27.09■■□□□ 1.93
PTPN18-211ENST00000481492 PIP4K2AP48426 406 aaPredicted RBP27.09■■□□□ 1.93
PTPN18-211ENST00000481492 DDR1Q08345 913 aa27.09■■□□□ 1.93
PTPN18-211ENST00000481492 CHD4Q14839 1912 aa27.08■■□□□ 1.93
PTPN18-211ENST00000481492 ZPR1O75312 459 aa27.08■■□□□ 1.93
PTPN18-211ENST00000481492 IL6STP40189 918 aaPredicted RBP27.08■■□□□ 1.93
PTPN18-211ENST00000481492 KDM3BQ7LBC6 1761 aa27.07■■□□□ 1.92
PTPN18-211ENST00000481492 NBPF26B4DH59 902 aa27.07■■□□□ 1.92
PTPN18-211ENST00000481492 NBPF10Q6P3W6 841 aaKnown RBP27.07■■□□□ 1.92
PTPN18-211ENST00000481492 NBPF15Q8N660 670 aa27.07■■□□□ 1.92
PTPN18-211ENST00000481492 ANP32CO43423 234 aa27.06■■□□□ 1.92
PTPN18-211ENST00000481492 GIGYF1O75420 1035 aaPredicted RBP27.06■■□□□ 1.92
PTPN18-211ENST00000481492 GOLGB1Q14789 3259 aaKnown RBP27.06■■□□□ 1.92
PTPN18-211ENST00000481492 APAF1O14727 1248 aa27.05■■□□□ 1.92
PTPN18-211ENST00000481492 TBC1D2BQ9UPU7 963 aa27.05■■□□□ 1.92
PTPN18-211ENST00000481492 LMOD3Q0VAK6 560 aa27.04■■□□□ 1.92
PTPN18-211ENST00000481492 NFIXQ14938 502 aa27.04■■□□□ 1.92
PTPN18-211ENST00000481492 PARP3Q9Y6F1 533 aa27.04■■□□□ 1.92
PTPN18-211ENST00000481492 POLRMTO00411 1230 aaKnown RBP27.03■■□□□ 1.92
PTPN18-211ENST00000481492 YBX3P16989 372 aaKnown RBP eCLIP27.03■■□□□ 1.92
PTPN18-211ENST00000481492 ZNF330Q9Y3S2 320 aaPredicted RBP27.03■■□□□ 1.92
PTPN18-211ENST00000481492 A0A087WZG4 1122 aa27.02■■□□□ 1.92
PTPN18-211ENST00000481492 GPR162Q16538 588 aa27.02■■□□□ 1.92
PTPN18-211ENST00000481492 TSPYL4Q9UJ04 414 aa27.02■■□□□ 1.92
PTPN18-211ENST00000481492 C10orf71Q711Q0 1435 aa27.01■■□□□ 1.91
PTPN18-211ENST00000481492 CHL1O00533 1208 aa27■■□□□ 1.91
PTPN18-211ENST00000481492 CAMTA2O94983 1202 aa27■■□□□ 1.91
PTPN18-211ENST00000481492 BABAM1Q9NWV8 329 aa27■■□□□ 1.91
PTPN18-211ENST00000481492 PELP1Q8IZL8 1130 aaKnown RBP26.99■■□□□ 1.91
PTPN18-211ENST00000481492 MRS2Q9HD23 443 aa26.99■■□□□ 1.91
PTPN18-211ENST00000481492 TBC1D9BQ66K14 1250 aa26.97■■□□□ 1.91
PTPN18-211ENST00000481492 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
PTPN18-211ENST00000481492 A0A0G2JLW4 131 aa26.97■■□□□ 1.91
PTPN18-211ENST00000481492 DZIP3Q86Y13 1208 aaKnown RBP26.97■■□□□ 1.91
PTPN18-211ENST00000481492 WWC3Q9ULE0 1092 aa26.97■■□□□ 1.91
PTPN18-211ENST00000481492 PXDNLA1KZ92 1463 aa26.96■■□□□ 1.91
PTPN18-211ENST00000481492 KIF13BQ9NQT8 1826 aa26.96■■□□□ 1.91
PTPN18-211ENST00000481492 KRT24Q2M2I5 525 aa26.96■■□□□ 1.91
PTPN18-211ENST00000481492 KIAA1551Q9HCM1 1747 aa26.96■■□□□ 1.91
PTPN18-211ENST00000481492 KCNA3P22001 575 aa26.95■■□□□ 1.9
PTPN18-211ENST00000481492 C1QTNF8P60827 252 aa26.95■■□□□ 1.9
PTPN18-211ENST00000481492 TGFB2P61812 414 aa26.95■■□□□ 1.9
PTPN18-211ENST00000481492 BICDL1Q6ZP65 573 aa26.95■■□□□ 1.9
PTPN18-211ENST00000481492 CEP350Q5VT06 3117 aa26.94■■□□□ 1.9
PTPN18-211ENST00000481492 SERPINB2P05120 415 aa26.94■■□□□ 1.9
PTPN18-211ENST00000481492 DPEP1P16444 411 aa26.94■■□□□ 1.9
PTPN18-211ENST00000481492 LAS1LQ9Y4W2 734 aaKnown RBP26.94■■□□□ 1.9
PTPN18-211ENST00000481492 ZNF853P0CG23 659 aa26.92■■□□□ 1.9
PTPN18-211ENST00000481492 PDIA6Q15084 440 aa26.91■■□□□ 1.9
PTPN18-211ENST00000481492 LAMB4A4D0S4 1761 aa26.91■■□□□ 1.9
PTPN18-211ENST00000481492 SCN7AQ01118 1682 aa26.91■■□□□ 1.9
PTPN18-211ENST00000481492 LRP10Q7Z4F1 713 aa26.9■■□□□ 1.9
PTPN18-211ENST00000481492 NPM2Q86SE8 214 aaKnown RBP26.9■■□□□ 1.9
PTPN18-211ENST00000481492 CFAP44Q96MT7 982 aa26.9■■□□□ 1.9
PTPN18-211ENST00000481492 NGEFQ8N5V2 710 aa26.89■■□□□ 1.9
PTPN18-211ENST00000481492 N4BP2Q86UW6 1770 aaPredicted RBP26.89■■□□□ 1.9
PTPN18-211ENST00000481492 NRXN2Q9P2S2 1712 aa26.89■■□□□ 1.89
PTPN18-211ENST00000481492 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
PTPN18-211ENST00000481492 EIF2S2P20042 333 aaKnown RBP26.88■■□□□ 1.89
PTPN18-211ENST00000481492 HLFQ16534 295 aa26.88■■□□□ 1.89
PTPN18-211ENST00000481492 TTLL7Q6ZT98 887 aa26.88■■□□□ 1.89
PTPN18-211ENST00000481492 MBIPQ9NS73 344 aa26.88■■□□□ 1.89
PTPN18-211ENST00000481492 GRIN3BO60391 1043 aa26.87■■□□□ 1.89
PTPN18-211ENST00000481492 MYL6BP14649 208 aa26.87■■□□□ 1.89
PTPN18-211ENST00000481492 CHRNA5P30532 468 aa26.87■■□□□ 1.89
PTPN18-211ENST00000481492 CARMIL3Q8ND23 1372 aa26.87■■□□□ 1.89
PTPN18-211ENST00000481492 PROSER3Q2NL68 480 aa26.86■■□□□ 1.89
PTPN18-211ENST00000481492 CLEC4GQ6UXB4 293 aa26.86■■□□□ 1.89
PTPN18-211ENST00000481492 BCORQ6W2J9 1755 aa26.86■■□□□ 1.89
PTPN18-211ENST00000481492 CCDC24Q8N4L8 307 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms