RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 STARD3NLO95772 234 aa24.71■■□□□ 1.55
AGRN-208ENST00000479707 CANXP27824 592 aaKnown RBP24.71■■□□□ 1.55
AGRN-208ENST00000479707 ARHGEF1Q92888 912 aaKnown RBP24.71■■□□□ 1.55
AGRN-208ENST00000479707 TEX13AQ9BXU3 409 aaPredicted RBP24.71■■□□□ 1.55
AGRN-208ENST00000479707 ZBTB1Q9Y2K1 713 aa24.71■■□□□ 1.55
AGRN-208ENST00000479707 USP16Q9Y5T5 823 aa24.71■■□□□ 1.55
AGRN-208ENST00000479707 SNRPA1P09661 255 aaKnown RBP24.7■■□□□ 1.54
AGRN-208ENST00000479707 PTGER2P43116 358 aa24.7■■□□□ 1.54
AGRN-208ENST00000479707 PPP1R1BQ9UD71 204 aaPredicted RBP24.7■■□□□ 1.54
AGRN-208ENST00000479707 EIF4A1P60842 406 aaKnown RBP24.69■■□□□ 1.54
AGRN-208ENST00000479707 SALL2Q9Y467 1007 aaPredicted RBP24.69■■□□□ 1.54
AGRN-208ENST00000479707 A1BGP04217 495 aa24.68■■□□□ 1.54
AGRN-208ENST00000479707 RFC4P35249 363 aa24.68■■□□□ 1.54
AGRN-208ENST00000479707 ADRA2BP18089 450 aa24.66■■□□□ 1.54
AGRN-208ENST00000479707 MIER1Q8N108 512 aa24.66■■□□□ 1.54
AGRN-208ENST00000479707 SGIP1Q9BQI5 828 aa24.66■■□□□ 1.54
AGRN-208ENST00000479707 ZNF330Q9Y3S2 320 aaPredicted RBP24.66■■□□□ 1.54
AGRN-208ENST00000479707 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
AGRN-208ENST00000479707 POLD1P28340 1107 aa24.65■■□□□ 1.54
AGRN-208ENST00000479707 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
AGRN-208ENST00000479707 SOS1Q07889 1333 aaPredicted RBP24.64■■□□□ 1.54
AGRN-208ENST00000479707 CHL1O00533 1208 aa24.64■■□□□ 1.54
AGRN-208ENST00000479707 BABAM1Q9NWV8 329 aa24.64■■□□□ 1.54
AGRN-208ENST00000479707 SRP68Q9UHB9 627 aaKnown RBP24.64■■□□□ 1.54
AGRN-208ENST00000479707 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
AGRN-208ENST00000479707 C4AP0C0L4 1744 aa24.63■■□□□ 1.53
AGRN-208ENST00000479707 CFAP44Q96MT7 982 aa24.62■■□□□ 1.53
AGRN-208ENST00000479707 ARXQ96QS3 562 aa24.62■■□□□ 1.53
AGRN-208ENST00000479707 COL15A1P39059 1388 aa24.61■■□□□ 1.53
AGRN-208ENST00000479707 COL24A1Q17RW2 1714 aa24.61■■□□□ 1.53
AGRN-208ENST00000479707 CALD1Q05682 793 aaKnown RBP24.6■■□□□ 1.53
AGRN-208ENST00000479707 WWC1Q8IX03 1113 aa24.6■■□□□ 1.53
AGRN-208ENST00000479707 ZPR1O75312 459 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 GYS1P13807 737 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 EIF5P55010 431 aaKnown RBP24.59■■□□□ 1.53
AGRN-208ENST00000479707 CCDC27Q2M243 656 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 KLHL34Q8N239 644 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 MBIPQ9NS73 344 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 SRCAPQ6ZRS2 3230 aa24.59■■□□□ 1.53
AGRN-208ENST00000479707 GNAI1P63096 354 aa24.58■■□□□ 1.53
AGRN-208ENST00000479707 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
AGRN-208ENST00000479707 IFT57Q9NWB7 429 aa24.58■■□□□ 1.53
AGRN-208ENST00000479707 USP42Q9H9J4 1324 aaKnown RBP24.58■■□□□ 1.52
AGRN-208ENST00000479707 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
AGRN-208ENST00000479707 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
AGRN-208ENST00000479707 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
AGRN-208ENST00000479707 IL6STP40189 918 aaPredicted RBP24.57■■□□□ 1.52
AGRN-208ENST00000479707 NPM2Q86SE8 214 aaKnown RBP24.57■■□□□ 1.52
AGRN-208ENST00000479707 NLGN1Q8N2Q7 840 aa24.57■■□□□ 1.52
AGRN-208ENST00000479707 NBPF26B4DH59 902 aa24.56■■□□□ 1.52
AGRN-208ENST00000479707 NBPF10Q6P3W6 841 aaKnown RBP24.56■■□□□ 1.52
AGRN-208ENST00000479707 NBPF15Q8N660 670 aa24.56■■□□□ 1.52
AGRN-208ENST00000479707 TBC1D2BQ9UPU7 963 aa24.56■■□□□ 1.52
AGRN-208ENST00000479707 A0A087WZG4 1122 aa24.55■■□□□ 1.52
AGRN-208ENST00000479707 FKBP8Q14318 412 aa24.55■■□□□ 1.52
AGRN-208ENST00000479707 NGEFQ8N5V2 710 aa24.55■■□□□ 1.52
AGRN-208ENST00000479707 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
AGRN-208ENST00000479707 FHDC1Q9C0D6 1143 aaPredicted RBP24.55■■□□□ 1.52
AGRN-208ENST00000479707 NARFQ9UHQ1 456 aa24.55■■□□□ 1.52
AGRN-208ENST00000479707 MMP10P09238 476 aa24.54■■□□□ 1.52
AGRN-208ENST00000479707 MYL6BP14649 208 aa24.53■■□□□ 1.52
AGRN-208ENST00000479707 NCBP3Q53F19 620 aaKnown RBP24.53■■□□□ 1.52
AGRN-208ENST00000479707 TSR2Q969E8 191 aaKnown RBP24.52■■□□□ 1.52
AGRN-208ENST00000479707 BCL2L12Q9HB09 334 aa24.52■■□□□ 1.52
AGRN-208ENST00000479707 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
AGRN-208ENST00000479707 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
AGRN-208ENST00000479707 DUSP27Q5VZP5 1158 aa24.5■■□□□ 1.51
AGRN-208ENST00000479707 SYT17Q9BSW7 474 aa24.5■■□□□ 1.51
AGRN-208ENST00000479707 WDR63Q8IWG1 891 aa24.49■■□□□ 1.51
AGRN-208ENST00000479707 PARP3Q9Y6F1 533 aa24.49■■□□□ 1.51
AGRN-208ENST00000479707 ANXA1P04083 346 aa24.48■■□□□ 1.51
AGRN-208ENST00000479707 BICDL1Q6ZP65 573 aa24.48■■□□□ 1.51
AGRN-208ENST00000479707 IL16Q14005 1332 aa24.47■■□□□ 1.51
AGRN-208ENST00000479707 CAMTA2O94983 1202 aa24.47■■□□□ 1.51
AGRN-208ENST00000479707 C8orf58Q8NAV2 365 aa24.47■■□□□ 1.51
AGRN-208ENST00000479707 TM4SF1P30408 202 aa24.46■■□□□ 1.51
AGRN-208ENST00000479707 NFIXQ14938 502 aa24.46■■□□□ 1.51
AGRN-208ENST00000479707 DDR1Q08345 913 aa24.45■■□□□ 1.5
AGRN-208ENST00000479707 PDIA6Q15084 440 aa24.45■■□□□ 1.5
AGRN-208ENST00000479707 PROSER3Q2NL68 480 aa24.45■■□□□ 1.5
AGRN-208ENST00000479707 HDGFL1Q5TGJ6 251 aa24.45■■□□□ 1.5
AGRN-208ENST00000479707 ERBB4Q15303 1308 aa24.44■■□□□ 1.5
AGRN-208ENST00000479707 HOXB7P09629 217 aa24.44■■□□□ 1.5
AGRN-208ENST00000479707 TBC1D9BQ66K14 1250 aa24.44■■□□□ 1.5
AGRN-208ENST00000479707 TTLL7Q6ZT98 887 aa24.44■■□□□ 1.5
AGRN-208ENST00000479707 SPINK5Q9NQ38 1064 aaPredicted RBP24.44■■□□□ 1.5
AGRN-208ENST00000479707 TSPYL6Q8N831 410 aa24.43■■□□□ 1.5
AGRN-208ENST00000479707 NLGN2Q8NFZ4 835 aa24.43■■□□□ 1.5
AGRN-208ENST00000479707 SCN7AQ01118 1682 aa24.43■■□□□ 1.5
AGRN-208ENST00000479707 POLRMTO00411 1230 aaKnown RBP24.42■■□□□ 1.5
AGRN-208ENST00000479707 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
AGRN-208ENST00000479707 BCORQ6W2J9 1755 aa24.42■■□□□ 1.5
AGRN-208ENST00000479707 FANCIQ9NVI1 1328 aa24.41■■□□□ 1.5
AGRN-208ENST00000479707 AIMP1Q12904 312 aaKnown RBP24.41■■□□□ 1.5
AGRN-208ENST00000479707 HLFQ16534 295 aa24.41■■□□□ 1.5
AGRN-208ENST00000479707 CD2APQ9Y5K6 639 aa24.41■■□□□ 1.5
AGRN-208ENST00000479707 KIF6Q6ZMV9 814 aa24.4■■□□□ 1.5
AGRN-208ENST00000479707 ZBTB3Q9H5J0 574 aa24.4■■□□□ 1.5
AGRN-208ENST00000479707 DDX21Q9NR30 783 aaKnown RBP eCLIP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms