RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.54■■■□□ 2.8
PERM1-203ENST00000479361 GIGYF1O75420 1035 aaPredicted RBP32.54■■■□□ 2.8
PERM1-203ENST00000479361 PHF14O94880 888 aa32.54■■■□□ 2.8
PERM1-203ENST00000479361 MBIPQ9NS73 344 aa32.54■■■□□ 2.8
PERM1-203ENST00000479361 TUBGCP6Q96RT7 1819 aa32.54■■■□□ 2.8
PERM1-203ENST00000479361 UBR3Q6ZT12 1888 aa32.53■■■□□ 2.8
PERM1-203ENST00000479361 MSH5O43196 834 aa32.53■■■□□ 2.8
PERM1-203ENST00000479361 ADRA2BP18089 450 aa32.53■■■□□ 2.8
PERM1-203ENST00000479361 PDGFDQ9GZP0 370 aaPredicted RBP32.53■■■□□ 2.8
PERM1-203ENST00000479361 COL23A1Q86Y22 540 aaPredicted RBP32.52■■■□□ 2.8
PERM1-203ENST00000479361 SLC16A10Q8TF71 515 aa32.52■■■□□ 2.8
PERM1-203ENST00000479361 USP16Q9Y5T5 823 aa32.52■■■□□ 2.8
PERM1-203ENST00000479361 CASZ1Q86V15 1759 aa32.52■■■□□ 2.8
PERM1-203ENST00000479361 PRAMEF22A3QJZ6 481 aa32.51■■■□□ 2.79
PERM1-203ENST00000479361 TRAPPC3LQ5T215 181 aa32.51■■■□□ 2.79
PERM1-203ENST00000479361 AMIGO3Q86WK7 504 aa32.51■■■□□ 2.79
PERM1-203ENST00000479361 MYH14Q7Z406 1995 aaKnown RBP32.5■■■□□ 2.79
PERM1-203ENST00000479361 ZBTB1Q9Y2K1 713 aa32.5■■■□□ 2.79
PERM1-203ENST00000479361 CANXP27824 592 aaKnown RBP32.47■■■□□ 2.79
PERM1-203ENST00000479361 SMIM5Q71RC9 77 aa32.47■■■□□ 2.79
PERM1-203ENST00000479361 MTFR1LQ9H019 292 aa32.47■■■□□ 2.79
PERM1-203ENST00000479361 SOS1Q07889 1333 aaPredicted RBP32.47■■■□□ 2.79
PERM1-203ENST00000479361 A1BGP04217 495 aa32.46■■■□□ 2.79
PERM1-203ENST00000479361 ZBTB7AO95365 584 aa32.45■■■□□ 2.79
PERM1-203ENST00000479361 RFC4P35249 363 aa32.45■■■□□ 2.79
PERM1-203ENST00000479361 ZNF521Q96K83 1311 aa32.45■■■□□ 2.78
PERM1-203ENST00000479361 LAMB4A4D0S4 1761 aa32.45■■■□□ 2.78
PERM1-203ENST00000479361 HOXB7P09629 217 aa32.44■■■□□ 2.78
PERM1-203ENST00000479361 NPM2Q86SE8 214 aaKnown RBP32.44■■■□□ 2.78
PERM1-203ENST00000479361 ARHGEF1Q92888 912 aaKnown RBP32.44■■■□□ 2.78
PERM1-203ENST00000479361 SPON1Q9HCB6 807 aa32.44■■■□□ 2.78
PERM1-203ENST00000479361 IL6STP40189 918 aaPredicted RBP32.43■■■□□ 2.78
PERM1-203ENST00000479361 KRT24Q2M2I5 525 aa32.42■■■□□ 2.78
PERM1-203ENST00000479361 TSR2Q969E8 191 aaKnown RBP32.42■■■□□ 2.78
PERM1-203ENST00000479361 COL15A1P39059 1388 aa32.42■■■□□ 2.78
PERM1-203ENST00000479361 EIF5P55010 431 aaKnown RBP32.41■■■□□ 2.78
PERM1-203ENST00000479361 MYH16Q9H6N6 1097 aa32.41■■■□□ 2.78
PERM1-203ENST00000479361 A0A087WZG4 1122 aa32.4■■■□□ 2.78
PERM1-203ENST00000479361 ERBB4Q15303 1308 aa32.4■■■□□ 2.78
PERM1-203ENST00000479361 EIF2S2P20042 333 aaKnown RBP32.39■■■□□ 2.78
PERM1-203ENST00000479361 DUSP27Q5VZP5 1158 aa32.39■■■□□ 2.78
PERM1-203ENST00000479361 ATF5Q9Y2D1 282 aaPredicted RBP32.39■■■□□ 2.78
PERM1-203ENST00000479361 ZNF330Q9Y3S2 320 aaPredicted RBP32.39■■■□□ 2.78
PERM1-203ENST00000479361 FANCIQ9NVI1 1328 aa32.38■■■□□ 2.77
PERM1-203ENST00000479361 GOLGA2Q08379 1002 aa32.38■■■□□ 2.77
PERM1-203ENST00000479361 CHMP4AQ9BY43 222 aa32.37■■■□□ 2.77
PERM1-203ENST00000479361 NBPF26B4DH59 902 aa32.36■■■□□ 2.77
PERM1-203ENST00000479361 ZPR1O75312 459 aa32.36■■■□□ 2.77
PERM1-203ENST00000479361 PIP4K2AP48426 406 aaPredicted RBP32.36■■■□□ 2.77
PERM1-203ENST00000479361 NBPF10Q6P3W6 841 aaKnown RBP32.36■■■□□ 2.77
PERM1-203ENST00000479361 NBPF15Q8N660 670 aa32.36■■■□□ 2.77
PERM1-203ENST00000479361 USP42Q9H9J4 1324 aaKnown RBP32.35■■■□□ 2.77
PERM1-203ENST00000479361 HDGFL1Q5TGJ6 251 aa32.35■■■□□ 2.77
PERM1-203ENST00000479361 C4AP0C0L4 1744 aa32.34■■■□□ 2.77
PERM1-203ENST00000479361 HNRNPUQ00839 825 aaKnown RBP eCLIP32.34■■■□□ 2.77
PERM1-203ENST00000479361 C8orf58Q8NAV2 365 aa32.34■■■□□ 2.77
PERM1-203ENST00000479361 SPINK5Q9NQ38 1064 aaPredicted RBP32.34■■■□□ 2.77
PERM1-203ENST00000479361 NARFQ9UHQ1 456 aa32.34■■■□□ 2.77
PERM1-203ENST00000479361 E9PSI1 815 aa32.33■■■□□ 2.77
PERM1-203ENST00000479361 ELL2O00472 640 aaPredicted RBP32.33■■■□□ 2.77
PERM1-203ENST00000479361 LRP5O75197 1615 aa32.33■■■□□ 2.77
PERM1-203ENST00000479361 POLD1P28340 1107 aa32.32■■■□□ 2.76
PERM1-203ENST00000479361 MSL1Q68DK7 614 aa32.32■■■□□ 2.76
PERM1-203ENST00000479361 NLGN1Q8N2Q7 840 aa32.32■■■□□ 2.76
PERM1-203ENST00000479361 GYS1P13807 737 aa32.31■■■□□ 2.76
PERM1-203ENST00000479361 NECTIN2Q92692 538 aa32.31■■■□□ 2.76
PERM1-203ENST00000479361 ARXQ96QS3 562 aa32.31■■■□□ 2.76
PERM1-203ENST00000479361 SRP68Q9UHB9 627 aaKnown RBP32.31■■■□□ 2.76
PERM1-203ENST00000479361 MYL6BP14649 208 aa32.3■■■□□ 2.76
PERM1-203ENST00000479361 PTGER2P43116 358 aa32.3■■■□□ 2.76
PERM1-203ENST00000479361 TWISTNBQ3B726 338 aaPredicted RBP32.29■■■□□ 2.76
PERM1-203ENST00000479361 USPL1Q5W0Q7 1092 aa32.29■■■□□ 2.76
PERM1-203ENST00000479361 DZIP3Q86Y13 1208 aaKnown RBP32.29■■■□□ 2.76
PERM1-203ENST00000479361 TBC1D2BQ9UPU7 963 aa32.29■■■□□ 2.76
PERM1-203ENST00000479361 TSPYL6Q8N831 410 aa32.28■■■□□ 2.76
PERM1-203ENST00000479361 SGIP1Q9BQI5 828 aa32.28■■■□□ 2.76
PERM1-203ENST00000479361 DDX21Q9NR30 783 aaKnown RBP eCLIP32.28■■■□□ 2.76
PERM1-203ENST00000479361 DBF4Q9UBU7 674 aaPredicted RBP32.28■■■□□ 2.76
PERM1-203ENST00000479361 SRCAPQ6ZRS2 3230 aa32.26■■■□□ 2.76
PERM1-203ENST00000479361 EXOSC9Q06265 439 aaKnown RBP32.26■■■□□ 2.75
PERM1-203ENST00000479361 SLFN5Q08AF3 891 aa32.26■■■□□ 2.75
PERM1-203ENST00000479361 PDIA6Q15084 440 aa32.26■■■□□ 2.75
PERM1-203ENST00000479361 CCDC30Q5VVM6 783 aa32.26■■■□□ 2.75
PERM1-203ENST00000479361 CHPF2Q9P2E5 772 aa32.26■■■□□ 2.75
PERM1-203ENST00000479361 COL24A1Q17RW2 1714 aa32.26■■■□□ 2.75
PERM1-203ENST00000479361 PPP1R1BQ9UD71 204 aaPredicted RBP32.25■■■□□ 2.75
PERM1-203ENST00000479361 FKBP8Q14318 412 aa32.24■■■□□ 2.75
PERM1-203ENST00000479361 PROSER3Q2NL68 480 aa32.23■■■□□ 2.75
PERM1-203ENST00000479361 KIF6Q6ZMV9 814 aa32.23■■■□□ 2.75
PERM1-203ENST00000479361 RGL2O15211 777 aa32.22■■■□□ 2.75
PERM1-203ENST00000479361 CAMTA2O94983 1202 aa32.22■■■□□ 2.75
PERM1-203ENST00000479361 CDCA7LQ96GN5 454 aa32.22■■■□□ 2.75
PERM1-203ENST00000479361 HYPKQ9NX55 129 aa32.22■■■□□ 2.75
PERM1-203ENST00000479361 ZNF652Q9Y2D9 606 aa32.22■■■□□ 2.75
PERM1-203ENST00000479361 ANXA1P04083 346 aa32.21■■■□□ 2.75
PERM1-203ENST00000479361 MMP10P09238 476 aa32.21■■■□□ 2.75
PERM1-203ENST00000479361 LRP10Q7Z4F1 713 aa32.21■■■□□ 2.75
PERM1-203ENST00000479361 BCL2L12Q9HB09 334 aa32.2■■■□□ 2.75
PERM1-203ENST00000479361 SCN7AQ01118 1682 aa32.2■■■□□ 2.74
PERM1-203ENST00000479361 CLEC4GQ6UXB4 293 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms