RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 COL15A1P39059 1388 aa23.61■■□□□ 1.37
C4A-253ENST00000477424 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
C4A-253ENST00000477424 USP42Q9H9J4 1324 aaKnown RBP23.6■■□□□ 1.37
C4A-253ENST00000477424 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
C4A-253ENST00000477424 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
C4A-253ENST00000477424 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
C4A-253ENST00000477424 PRAMEF22A3QJZ6 481 aa23.59■■□□□ 1.37
C4A-253ENST00000477424 MMP10P09238 476 aa23.59■■□□□ 1.37
C4A-253ENST00000477424 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
C4A-253ENST00000477424 TMPOP42166 694 aaKnown RBP23.58■■□□□ 1.37
C4A-253ENST00000477424 TAF7Q15545 349 aaPredicted RBP23.58■■□□□ 1.37
C4A-253ENST00000477424 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
C4A-253ENST00000477424 BCORQ6W2J9 1755 aa23.57■■□□□ 1.36
C4A-253ENST00000477424 CANXP27824 592 aaKnown RBP23.57■■□□□ 1.36
C4A-253ENST00000477424 RIPK4P57078 832 aa23.57■■□□□ 1.36
C4A-253ENST00000477424 AFDNP55196 1824 aaKnown RBP23.56■■□□□ 1.36
C4A-253ENST00000477424 N4BP2Q86UW6 1770 aaPredicted RBP23.56■■□□□ 1.36
C4A-253ENST00000477424 STARD3NLO95772 234 aa23.56■■□□□ 1.36
C4A-253ENST00000477424 FKBP8Q14318 412 aa23.55■■□□□ 1.36
C4A-253ENST00000477424 NLGN1Q8N2Q7 840 aa23.55■■□□□ 1.36
C4A-253ENST00000477424 RUNDC1Q96C34 613 aa23.55■■□□□ 1.36
C4A-253ENST00000477424 A1BGP04217 495 aa23.54■■□□□ 1.36
C4A-253ENST00000477424 USPL1Q5W0Q7 1092 aa23.54■■□□□ 1.36
C4A-253ENST00000477424 TEX13AQ9BXU3 409 aaPredicted RBP23.54■■□□□ 1.36
C4A-253ENST00000477424 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
C4A-253ENST00000477424 CHD4Q14839 1912 aa23.54■■□□□ 1.36
C4A-253ENST00000477424 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
C4A-253ENST00000477424 EIF5P55010 431 aaKnown RBP23.53■■□□□ 1.36
C4A-253ENST00000477424 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
C4A-253ENST00000477424 PIP4K2AP48426 406 aaPredicted RBP23.52■■□□□ 1.36
C4A-253ENST00000477424 DDR1Q08345 913 aa23.52■■□□□ 1.36
C4A-253ENST00000477424 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
C4A-253ENST00000477424 NARFQ9UHQ1 456 aa23.52■■□□□ 1.36
C4A-253ENST00000477424 NRXN2Q9P2S2 1712 aa23.52■■□□□ 1.36
C4A-253ENST00000477424 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
C4A-253ENST00000477424 BRCA1P38398 1863 aaKnown RBP23.51■■□□□ 1.35
C4A-253ENST00000477424 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
C4A-253ENST00000477424 BCL2L12Q9HB09 334 aa23.51■■□□□ 1.35
C4A-253ENST00000477424 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
C4A-253ENST00000477424 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
C4A-253ENST00000477424 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
C4A-253ENST00000477424 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
C4A-253ENST00000477424 ZPR1O75312 459 aa23.49■■□□□ 1.35
C4A-253ENST00000477424 EIF4A1P60842 406 aaKnown RBP23.49■■□□□ 1.35
C4A-253ENST00000477424 IL6STP40189 918 aaPredicted RBP23.48■■□□□ 1.35
C4A-253ENST00000477424 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
C4A-253ENST00000477424 ZNF330Q9Y3S2 320 aaPredicted RBP23.48■■□□□ 1.35
C4A-253ENST00000477424 UTRNP46939 3433 aa23.48■■□□□ 1.35
C4A-253ENST00000477424 ANP32CO43423 234 aa23.47■■□□□ 1.35
C4A-253ENST00000477424 PARP3Q9Y6F1 533 aa23.47■■□□□ 1.35
C4A-253ENST00000477424 NBPF26B4DH59 902 aa23.46■■□□□ 1.35
C4A-253ENST00000477424 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
C4A-253ENST00000477424 YBX3P16989 372 aaKnown RBP eCLIP23.46■■□□□ 1.35
C4A-253ENST00000477424 TM4SF1P30408 202 aa23.46■■□□□ 1.35
C4A-253ENST00000477424 NBPF10Q6P3W6 841 aaKnown RBP23.46■■□□□ 1.35
C4A-253ENST00000477424 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
C4A-253ENST00000477424 NBPF15Q8N660 670 aa23.46■■□□□ 1.35
C4A-253ENST00000477424 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
C4A-253ENST00000477424 NFIXQ14938 502 aa23.45■■□□□ 1.34
C4A-253ENST00000477424 GPR162Q16538 588 aa23.45■■□□□ 1.34
C4A-253ENST00000477424 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
C4A-253ENST00000477424 TBC1D2BQ9UPU7 963 aa23.45■■□□□ 1.34
C4A-253ENST00000477424 A0A087WZG4 1122 aa23.44■■□□□ 1.34
C4A-253ENST00000477424 ANKRD31Q8N7Z5 1873 aa23.43■■□□□ 1.34
C4A-253ENST00000477424 APAF1O14727 1248 aa23.43■■□□□ 1.34
C4A-253ENST00000477424 WWC3Q9ULE0 1092 aa23.43■■□□□ 1.34
C4A-253ENST00000477424 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
C4A-253ENST00000477424 MRS2Q9HD23 443 aa23.42■■□□□ 1.34
C4A-253ENST00000477424 DLEC1Q9Y238 1755 aa23.42■■□□□ 1.34
C4A-253ENST00000477424 NUP98P52948 1817 aa23.4■■□□□ 1.34
C4A-253ENST00000477424 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
C4A-253ENST00000477424 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
C4A-253ENST00000477424 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
C4A-253ENST00000477424 BABAM1Q9NWV8 329 aa23.39■■□□□ 1.33
C4A-253ENST00000477424 CARMIL3Q8ND23 1372 aa23.39■■□□□ 1.33
C4A-253ENST00000477424 ARFGEF1Q9Y6D6 1849 aa23.38■■□□□ 1.33
C4A-253ENST00000477424 CHL1O00533 1208 aa23.38■■□□□ 1.33
C4A-253ENST00000477424 COL11A2P13942 1736 aaPredicted RBP23.37■■□□□ 1.33
C4A-253ENST00000477424 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
C4A-253ENST00000477424 A0A0G2JLW4 131 aa23.37■■□□□ 1.33
C4A-253ENST00000477424 DPEP1P16444 411 aa23.37■■□□□ 1.33
C4A-253ENST00000477424 YY1P25490 414 aa23.37■■□□□ 1.33
C4A-253ENST00000477424 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
C4A-253ENST00000477424 SERPINB2P05120 415 aa23.36■■□□□ 1.33
C4A-253ENST00000477424 TGFB2P61812 414 aa23.36■■□□□ 1.33
C4A-253ENST00000477424 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
C4A-253ENST00000477424 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
C4A-253ENST00000477424 KCNA3P22001 575 aa23.34■■□□□ 1.33
C4A-253ENST00000477424 MYL6BP14649 208 aa23.32■■□□□ 1.32
C4A-253ENST00000477424 CHRNA5P30532 468 aa23.32■■□□□ 1.32
C4A-253ENST00000477424 CFAP44Q96MT7 982 aa23.32■■□□□ 1.32
C4A-253ENST00000477424 GRIN3BO60391 1043 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 ZNF853P0CG23 659 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
C4A-253ENST00000477424 PDIA6Q15084 440 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 PROSER3Q2NL68 480 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 TTLL7Q6ZT98 887 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 LRP10Q7Z4F1 713 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 NGEFQ8N5V2 710 aa23.31■■□□□ 1.32
C4A-253ENST00000477424 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms