RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 EIF4A1P60842 406 aaKnown RBP27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 ARHGEF1Q92888 912 aaKnown RBP27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 SGIP1Q9BQI5 828 aa27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 BABAM1Q9NWV8 329 aa27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 TSPYL4Q9UJ04 414 aa27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 USP16Q9Y5T5 823 aa27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 CICQ96RK0 1608 aaPredicted RBP27.49■■□□□ 1.99
MAP1LC3A-204ENST00000476428 ADRA2BP18089 450 aa27.48■■□□□ 1.99
MAP1LC3A-204ENST00000476428 ZBTB1Q9Y2K1 713 aa27.48■■□□□ 1.99
MAP1LC3A-204ENST00000476428 COL5A3P25940 1745 aaPredicted RBP27.47■■□□□ 1.99
MAP1LC3A-204ENST00000476428 CCER2I3L3R5 266 aa27.47■■□□□ 1.99
MAP1LC3A-204ENST00000476428 CHL1O00533 1208 aa27.46■■□□□ 1.99
MAP1LC3A-204ENST00000476428 MSL1Q68DK7 614 aa27.46■■□□□ 1.99
MAP1LC3A-204ENST00000476428 SOS1Q07889 1333 aaPredicted RBP27.45■■□□□ 1.99
MAP1LC3A-204ENST00000476428 UBR3Q6ZT12 1888 aa27.45■■□□□ 1.99
MAP1LC3A-204ENST00000476428 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
MAP1LC3A-204ENST00000476428 LAS1LQ9Y4W2 734 aaKnown RBP27.45■■□□□ 1.98
MAP1LC3A-204ENST00000476428 A1BGP04217 495 aa27.44■■□□□ 1.98
MAP1LC3A-204ENST00000476428 RFC4P35249 363 aa27.44■■□□□ 1.98
MAP1LC3A-204ENST00000476428 MYH14Q7Z406 1995 aaKnown RBP27.43■■□□□ 1.98
MAP1LC3A-204ENST00000476428 GIGYF1O75420 1035 aaPredicted RBP27.43■■□□□ 1.98
MAP1LC3A-204ENST00000476428 POLD1P28340 1107 aa27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 CCDC27Q2M243 656 aa27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 NCBP3Q53F19 620 aaKnown RBP27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 MIER1Q8N108 512 aa27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 ZNF784Q8NCA9 323 aaPredicted RBP27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 CFAP44Q96MT7 982 aa27.41■■□□□ 1.98
MAP1LC3A-204ENST00000476428 EIF5P55010 431 aaKnown RBP27.4■■□□□ 1.98
MAP1LC3A-204ENST00000476428 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
MAP1LC3A-204ENST00000476428 ZNF853P0CG23 659 aa27.39■■□□□ 1.98
MAP1LC3A-204ENST00000476428 WWC1Q8IX03 1113 aa27.39■■□□□ 1.98
MAP1LC3A-204ENST00000476428 ARXQ96QS3 562 aa27.39■■□□□ 1.98
MAP1LC3A-204ENST00000476428 SRP68Q9UHB9 627 aaKnown RBP27.39■■□□□ 1.98
MAP1LC3A-204ENST00000476428 SALL2Q9Y467 1007 aaPredicted RBP27.38■■□□□ 1.97
MAP1LC3A-204ENST00000476428 KDM3BQ7LBC6 1761 aa27.37■■□□□ 1.97
MAP1LC3A-204ENST00000476428 GYS1P13807 737 aa27.37■■□□□ 1.97
MAP1LC3A-204ENST00000476428 IL6STP40189 918 aaPredicted RBP27.37■■□□□ 1.97
MAP1LC3A-204ENST00000476428 PIP4K2AP48426 406 aaPredicted RBP27.37■■□□□ 1.97
MAP1LC3A-204ENST00000476428 IFT57Q9NWB7 429 aa27.37■■□□□ 1.97
MAP1LC3A-204ENST00000476428 COL15A1P39059 1388 aa27.36■■□□□ 1.97
MAP1LC3A-204ENST00000476428 GNAI1P63096 354 aa27.36■■□□□ 1.97
MAP1LC3A-204ENST00000476428 MBIPQ9NS73 344 aa27.36■■□□□ 1.97
MAP1LC3A-204ENST00000476428 USP42Q9H9J4 1324 aaKnown RBP27.36■■□□□ 1.97
MAP1LC3A-204ENST00000476428 NBPF26B4DH59 902 aa27.35■■□□□ 1.97
MAP1LC3A-204ENST00000476428 NBPF10Q6P3W6 841 aaKnown RBP27.35■■□□□ 1.97
MAP1LC3A-204ENST00000476428 NLGN1Q8N2Q7 840 aa27.35■■□□□ 1.97
MAP1LC3A-204ENST00000476428 NBPF15Q8N660 670 aa27.35■■□□□ 1.97
MAP1LC3A-204ENST00000476428 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
MAP1LC3A-204ENST00000476428 A0A087WZG4 1122 aa27.34■■□□□ 1.97
MAP1LC3A-204ENST00000476428 ZPR1O75312 459 aa27.34■■□□□ 1.97
MAP1LC3A-204ENST00000476428 KRT24Q2M2I5 525 aa27.34■■□□□ 1.97
MAP1LC3A-204ENST00000476428 NARFQ9UHQ1 456 aa27.34■■□□□ 1.97
MAP1LC3A-204ENST00000476428 USPL1Q5W0Q7 1092 aa27.33■■□□□ 1.97
MAP1LC3A-204ENST00000476428 FHDC1Q9C0D6 1143 aaPredicted RBP27.33■■□□□ 1.97
MAP1LC3A-204ENST00000476428 FKBP8Q14318 412 aa27.32■■□□□ 1.96
MAP1LC3A-204ENST00000476428 SYT17Q9BSW7 474 aa27.32■■□□□ 1.96
MAP1LC3A-204ENST00000476428 TBC1D2BQ9UPU7 963 aa27.31■■□□□ 1.96
MAP1LC3A-204ENST00000476428 MMP10P09238 476 aa27.3■■□□□ 1.96
MAP1LC3A-204ENST00000476428 EIF2S2P20042 333 aaKnown RBP27.3■■□□□ 1.96
MAP1LC3A-204ENST00000476428 NPM2Q86SE8 214 aaKnown RBP27.3■■□□□ 1.96
MAP1LC3A-204ENST00000476428 BCL2L12Q9HB09 334 aa27.3■■□□□ 1.96
MAP1LC3A-204ENST00000476428 COL24A1Q17RW2 1714 aa27.3■■□□□ 1.96
MAP1LC3A-204ENST00000476428 NGEFQ8N5V2 710 aa27.29■■□□□ 1.96
MAP1LC3A-204ENST00000476428 IL16Q14005 1332 aa27.28■■□□□ 1.96
MAP1LC3A-204ENST00000476428 WDR63Q8IWG1 891 aa27.28■■□□□ 1.96
MAP1LC3A-204ENST00000476428 DUSP27Q5VZP5 1158 aa27.26■■□□□ 1.95
MAP1LC3A-204ENST00000476428 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
MAP1LC3A-204ENST00000476428 KLHL34Q8N239 644 aa27.26■■□□□ 1.95
MAP1LC3A-204ENST00000476428 CAMTA2O94983 1202 aa27.25■■□□□ 1.95
MAP1LC3A-204ENST00000476428 TM4SF1P30408 202 aa27.25■■□□□ 1.95
MAP1LC3A-204ENST00000476428 NECTIN2Q92692 538 aa27.25■■□□□ 1.95
MAP1LC3A-204ENST00000476428 CHD4Q14839 1912 aa27.25■■□□□ 1.95
MAP1LC3A-204ENST00000476428 C4AP0C0L4 1744 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 ERBB4Q15303 1308 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 HOXB7P09629 217 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 MYL6BP14649 208 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 C1QTNF8P60827 252 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 PDIA6Q15084 440 aa27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 TSR2Q969E8 191 aaKnown RBP27.24■■□□□ 1.95
MAP1LC3A-204ENST00000476428 C8orf58Q8NAV2 365 aa27.23■■□□□ 1.95
MAP1LC3A-204ENST00000476428 PARP3Q9Y6F1 533 aa27.23■■□□□ 1.95
MAP1LC3A-204ENST00000476428 ELL2O00472 640 aaPredicted RBP27.22■■□□□ 1.95
MAP1LC3A-204ENST00000476428 DDR1Q08345 913 aa27.22■■□□□ 1.95
MAP1LC3A-204ENST00000476428 NFIXQ14938 502 aa27.22■■□□□ 1.95
MAP1LC3A-204ENST00000476428 UTRNP46939 3433 aa27.22■■□□□ 1.95
MAP1LC3A-204ENST00000476428 PROSER3Q2NL68 480 aa27.21■■□□□ 1.95
MAP1LC3A-204ENST00000476428 ANXA1P04083 346 aa27.2■■□□□ 1.94
MAP1LC3A-204ENST00000476428 HDGFL1Q5TGJ6 251 aa27.2■■□□□ 1.94
MAP1LC3A-204ENST00000476428 LRP10Q7Z4F1 713 aa27.2■■□□□ 1.94
MAP1LC3A-204ENST00000476428 SPINK5Q9NQ38 1064 aaPredicted RBP27.2■■□□□ 1.94
MAP1LC3A-204ENST00000476428 CD2APQ9Y5K6 639 aa27.19■■□□□ 1.94
MAP1LC3A-204ENST00000476428 LAMB4A4D0S4 1761 aa27.19■■□□□ 1.94
MAP1LC3A-204ENST00000476428 ZNF521Q96K83 1311 aa27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 POLRMTO00411 1230 aaKnown RBP27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 TBC1D9BQ66K14 1250 aa27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 BICDL1Q6ZP65 573 aa27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 TTLL7Q6ZT98 887 aa27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 TSPYL6Q8N831 410 aa27.18■■□□□ 1.94
MAP1LC3A-204ENST00000476428 NLGN2Q8NFZ4 835 aa27.17■■□□□ 1.94
MAP1LC3A-204ENST00000476428 DDX21Q9NR30 783 aaKnown RBP eCLIP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms