RNA–Protein interactions for RNA: ENST00000475831.1

GBX1-202, Transcript of gastrulation brain homeobox 1, humanhuman

TSL 4

Gene GBX1, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-202ENST00000475831 PRAMEF22A3QJZ6 481 aa22.68■■□□□ 1.22
GBX1-202ENST00000475831 CANXP27824 592 aaKnown RBP22.68■■□□□ 1.22
GBX1-202ENST00000475831 PNISRQ8TF01 805 aaKnown RBP22.68■■□□□ 1.22
GBX1-202ENST00000475831 TRIM35Q9UPQ4 493 aa22.68■■□□□ 1.22
GBX1-202ENST00000475831 ZBTB1Q9Y2K1 713 aa22.68■■□□□ 1.22
GBX1-202ENST00000475831 USP16Q9Y5T5 823 aa22.68■■□□□ 1.22
GBX1-202ENST00000475831 APAF1O14727 1248 aa22.67■■□□□ 1.22
GBX1-202ENST00000475831 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
GBX1-202ENST00000475831 SYT17Q9BSW7 474 aa22.67■■□□□ 1.22
GBX1-202ENST00000475831 A1BGP04217 495 aa22.66■■□□□ 1.22
GBX1-202ENST00000475831 LMOD3Q0VAK6 560 aa22.66■■□□□ 1.22
GBX1-202ENST00000475831 SRP68Q9UHB9 627 aaKnown RBP22.66■■□□□ 1.22
GBX1-202ENST00000475831 SNRPA1P09661 255 aaKnown RBP22.65■■□□□ 1.22
GBX1-202ENST00000475831 SOS1Q07889 1333 aaPredicted RBP22.64■■□□□ 1.22
GBX1-202ENST00000475831 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.21
GBX1-202ENST00000475831 GYS1P13807 737 aa22.64■■□□□ 1.21
GBX1-202ENST00000475831 COL24A1Q17RW2 1714 aa22.64■■□□□ 1.21
GBX1-202ENST00000475831 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.21
GBX1-202ENST00000475831 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
GBX1-202ENST00000475831 NLGN1Q8N2Q7 840 aa22.63■■□□□ 1.21
GBX1-202ENST00000475831 TSPYL4Q9UJ04 414 aa22.62■■□□□ 1.21
GBX1-202ENST00000475831 LAS1LQ9Y4W2 734 aaKnown RBP22.62■■□□□ 1.21
GBX1-202ENST00000475831 ZPR1O75312 459 aa22.61■■□□□ 1.21
GBX1-202ENST00000475831 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
GBX1-202ENST00000475831 EIF5P55010 431 aaKnown RBP22.61■■□□□ 1.21
GBX1-202ENST00000475831 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
GBX1-202ENST00000475831 MMP10P09238 476 aa22.6■■□□□ 1.21
GBX1-202ENST00000475831 FKBP8Q14318 412 aa22.6■■□□□ 1.21
GBX1-202ENST00000475831 USPL1Q5W0Q7 1092 aa22.6■■□□□ 1.21
GBX1-202ENST00000475831 USP42Q9H9J4 1324 aaKnown RBP22.59■■□□□ 1.21
GBX1-202ENST00000475831 GIGYF1O75420 1035 aaPredicted RBP22.59■■□□□ 1.21
GBX1-202ENST00000475831 NARFQ9UHQ1 456 aa22.58■■□□□ 1.21
GBX1-202ENST00000475831 COL15A1P39059 1388 aa22.58■■□□□ 1.21
GBX1-202ENST00000475831 IL6STP40189 918 aaPredicted RBP22.57■■□□□ 1.2
GBX1-202ENST00000475831 BABAM1Q9NWV8 329 aa22.57■■□□□ 1.2
GBX1-202ENST00000475831 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
GBX1-202ENST00000475831 A0A087WZG4 1122 aa22.56■■□□□ 1.2
GBX1-202ENST00000475831 CHL1O00533 1208 aa22.56■■□□□ 1.2
GBX1-202ENST00000475831 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
GBX1-202ENST00000475831 NLGN2Q8NFZ4 835 aa22.56■■□□□ 1.2
GBX1-202ENST00000475831 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
GBX1-202ENST00000475831 C4AP0C0L4 1744 aa22.55■■□□□ 1.2
GBX1-202ENST00000475831 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
GBX1-202ENST00000475831 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
GBX1-202ENST00000475831 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
GBX1-202ENST00000475831 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
GBX1-202ENST00000475831 TM4SF1P30408 202 aa22.54■■□□□ 1.2
GBX1-202ENST00000475831 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
GBX1-202ENST00000475831 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
GBX1-202ENST00000475831 CD2APQ9Y5K6 639 aa22.53■■□□□ 1.2
GBX1-202ENST00000475831 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
GBX1-202ENST00000475831 EIF2S2P20042 333 aaKnown RBP22.51■■□□□ 1.19
GBX1-202ENST00000475831 DDR1Q08345 913 aa22.51■■□□□ 1.19
GBX1-202ENST00000475831 KRT24Q2M2I5 525 aa22.51■■□□□ 1.19
GBX1-202ENST00000475831 NGEFQ8N5V2 710 aa22.51■■□□□ 1.19
GBX1-202ENST00000475831 CFAP44Q96MT7 982 aa22.51■■□□□ 1.19
GBX1-202ENST00000475831 SALL2Q9Y467 1007 aaPredicted RBP22.51■■□□□ 1.19
GBX1-202ENST00000475831 NFIXQ14938 502 aa22.5■■□□□ 1.19
GBX1-202ENST00000475831 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
GBX1-202ENST00000475831 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
GBX1-202ENST00000475831 BICDL1Q6ZP65 573 aa22.49■■□□□ 1.19
GBX1-202ENST00000475831 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
GBX1-202ENST00000475831 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
GBX1-202ENST00000475831 MBIPQ9NS73 344 aa22.48■■□□□ 1.19
GBX1-202ENST00000475831 POLRMTO00411 1230 aaKnown RBP22.47■■□□□ 1.19
GBX1-202ENST00000475831 MYL6BP14649 208 aa22.47■■□□□ 1.19
GBX1-202ENST00000475831 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
GBX1-202ENST00000475831 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
GBX1-202ENST00000475831 GNAI1P63096 354 aa22.46■■□□□ 1.19
GBX1-202ENST00000475831 GPR162Q16538 588 aa22.46■■□□□ 1.19
GBX1-202ENST00000475831 TBC1D9BQ66K14 1250 aa22.46■■□□□ 1.19
GBX1-202ENST00000475831 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
GBX1-202ENST00000475831 IFT57Q9NWB7 429 aa22.46■■□□□ 1.19
GBX1-202ENST00000475831 CCDC27Q2M243 656 aa22.45■■□□□ 1.18
GBX1-202ENST00000475831 SERPINB2P05120 415 aa22.44■■□□□ 1.18
GBX1-202ENST00000475831 WWC3Q9ULE0 1092 aa22.44■■□□□ 1.18
GBX1-202ENST00000475831 ANXA1P04083 346 aa22.43■■□□□ 1.18
GBX1-202ENST00000475831 PDIA6Q15084 440 aa22.43■■□□□ 1.18
GBX1-202ENST00000475831 A0A0G2JLW4 131 aa22.42■■□□□ 1.18
GBX1-202ENST00000475831 ELL2O00472 640 aaPredicted RBP22.42■■□□□ 1.18
GBX1-202ENST00000475831 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
GBX1-202ENST00000475831 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
GBX1-202ENST00000475831 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
GBX1-202ENST00000475831 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
GBX1-202ENST00000475831 TGFB2P61812 414 aa22.41■■□□□ 1.18
GBX1-202ENST00000475831 HLFQ16534 295 aa22.41■■□□□ 1.18
GBX1-202ENST00000475831 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
GBX1-202ENST00000475831 DUSP27Q5VZP5 1158 aa22.41■■□□□ 1.18
GBX1-202ENST00000475831 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
GBX1-202ENST00000475831 CLEC4GQ6UXB4 293 aa22.4■■□□□ 1.18
GBX1-202ENST00000475831 ERBB4Q15303 1308 aa22.39■■□□□ 1.18
GBX1-202ENST00000475831 DPEP1P16444 411 aa22.39■■□□□ 1.17
GBX1-202ENST00000475831 YBX3P16989 372 aaKnown RBP eCLIP22.39■■□□□ 1.17
GBX1-202ENST00000475831 C8orf58Q8NAV2 365 aa22.39■■□□□ 1.17
GBX1-202ENST00000475831 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.17
GBX1-202ENST00000475831 CCER2I3L3R5 266 aa22.38■■□□□ 1.17
GBX1-202ENST00000475831 LRP10Q7Z4F1 713 aa22.38■■□□□ 1.17
GBX1-202ENST00000475831 CCDC24Q8N4L8 307 aa22.38■■□□□ 1.17
GBX1-202ENST00000475831 ZNF652Q9Y2D9 606 aa22.38■■□□□ 1.17
GBX1-202ENST00000475831 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms