RNA–Protein interactions for RNA: ENST00000474466.5

HM13-215, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-215ENST00000474466 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
HM13-215ENST00000474466 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.25
HM13-215ENST00000474466 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
HM13-215ENST00000474466 MIER1Q8N108 512 aa13.46□□□□□ -0.25
HM13-215ENST00000474466 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
HM13-215ENST00000474466 MTFR1LQ9H019 292 aa13.46□□□□□ -0.25
HM13-215ENST00000474466 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
HM13-215ENST00000474466 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
HM13-215ENST00000474466 CHL1O00533 1208 aa13.45□□□□□ -0.26
HM13-215ENST00000474466 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
HM13-215ENST00000474466 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
HM13-215ENST00000474466 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
HM13-215ENST00000474466 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
HM13-215ENST00000474466 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 PHF14O94880 888 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
HM13-215ENST00000474466 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
HM13-215ENST00000474466 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 GNAI1P63096 354 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 LAS1LQ9Y4W2 734 aaKnown RBP13.43□□□□□ -0.26
HM13-215ENST00000474466 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
HM13-215ENST00000474466 NUP98P52948 1817 aa13.42□□□□□ -0.26
HM13-215ENST00000474466 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
HM13-215ENST00000474466 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
HM13-215ENST00000474466 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
HM13-215ENST00000474466 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
HM13-215ENST00000474466 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
HM13-215ENST00000474466 COL15A1P39059 1388 aa13.42□□□□□ -0.26
HM13-215ENST00000474466 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
HM13-215ENST00000474466 PTGER2P43116 358 aa13.41□□□□□ -0.26
HM13-215ENST00000474466 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
HM13-215ENST00000474466 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
HM13-215ENST00000474466 IL16Q14005 1332 aa13.4□□□□□ -0.26
HM13-215ENST00000474466 A1BGP04217 495 aa13.4□□□□□ -0.26
HM13-215ENST00000474466 RFC4P35249 363 aa13.4□□□□□ -0.26
HM13-215ENST00000474466 IL6STP40189 918 aaPredicted RBP13.4□□□□□ -0.26
HM13-215ENST00000474466 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
HM13-215ENST00000474466 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
HM13-215ENST00000474466 WDR63Q8IWG1 891 aa13.39□□□□□ -0.27
HM13-215ENST00000474466 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
HM13-215ENST00000474466 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
HM13-215ENST00000474466 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
HM13-215ENST00000474466 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
HM13-215ENST00000474466 A0A087WZG4 1122 aa13.38□□□□□ -0.27
HM13-215ENST00000474466 HOXB7P09629 217 aa13.38□□□□□ -0.27
HM13-215ENST00000474466 POLD1P28340 1107 aa13.38□□□□□ -0.27
HM13-215ENST00000474466 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 GYS1P13807 737 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
HM13-215ENST00000474466 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
HM13-215ENST00000474466 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
HM13-215ENST00000474466 ZPR1O75312 459 aa13.36□□□□□ -0.27
HM13-215ENST00000474466 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
HM13-215ENST00000474466 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
HM13-215ENST00000474466 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
HM13-215ENST00000474466 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
HM13-215ENST00000474466 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
HM13-215ENST00000474466 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
HM13-215ENST00000474466 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
HM13-215ENST00000474466 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
HM13-215ENST00000474466 ARXQ96QS3 562 aa13.35□□□□□ -0.27
HM13-215ENST00000474466 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
HM13-215ENST00000474466 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
HM13-215ENST00000474466 FKBP8Q14318 412 aa13.33□□□□□ -0.28
HM13-215ENST00000474466 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
HM13-215ENST00000474466 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
HM13-215ENST00000474466 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
HM13-215ENST00000474466 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.28
HM13-215ENST00000474466 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.28
HM13-215ENST00000474466 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 RGL2O15211 777 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 MMP10P09238 476 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 MYL6BP14649 208 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 PDIA6Q15084 440 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
HM13-215ENST00000474466 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
HM13-215ENST00000474466 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
HM13-215ENST00000474466 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
HM13-215ENST00000474466 ELL2O00472 640 aaPredicted RBP13.31□□□□□ -0.28
HM13-215ENST00000474466 TM4SF1P30408 202 aa13.31□□□□□ -0.28
HM13-215ENST00000474466 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
HM13-215ENST00000474466 LRP10Q7Z4F1 713 aa13.31□□□□□ -0.28
HM13-215ENST00000474466 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
HM13-215ENST00000474466 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
HM13-215ENST00000474466 BRCA1P38398 1863 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms