RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 KDM3BQ7LBC6 1761 aa27.07■■□□□ 1.92
TOP3A-204ENST00000472959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.06■■□□□ 1.92
TOP3A-204ENST00000472959 COL23A1Q86Y22 540 aaPredicted RBP27.06■■□□□ 1.92
TOP3A-204ENST00000472959 PDGFDQ9GZP0 370 aaPredicted RBP27.06■■□□□ 1.92
TOP3A-204ENST00000472959 COL5A3P25940 1745 aaPredicted RBP27.06■■□□□ 1.92
TOP3A-204ENST00000472959 TRAPPC3LQ5T215 181 aa27.05■■□□□ 1.92
TOP3A-204ENST00000472959 AMIGO3Q86WK7 504 aa27.05■■□□□ 1.92
TOP3A-204ENST00000472959 MBIPQ9NS73 344 aa27.05■■□□□ 1.92
TOP3A-204ENST00000472959 USP16Q9Y5T5 823 aa27.05■■□□□ 1.92
TOP3A-204ENST00000472959 PHF14O94880 888 aa27.04■■□□□ 1.92
TOP3A-204ENST00000472959 PRAMEF22A3QJZ6 481 aa27.03■■□□□ 1.92
TOP3A-204ENST00000472959 MSH5O43196 834 aa27.03■■□□□ 1.92
TOP3A-204ENST00000472959 QSER1Q2KHR3 1735 aa27.02■■□□□ 1.92
TOP3A-204ENST00000472959 MTFR1LQ9H019 292 aa27.02■■□□□ 1.92
TOP3A-204ENST00000472959 ZBTB1Q9Y2K1 713 aa27.02■■□□□ 1.92
TOP3A-204ENST00000472959 SOS1Q07889 1333 aaPredicted RBP27■■□□□ 1.91
TOP3A-204ENST00000472959 SMIM5Q71RC9 77 aa27■■□□□ 1.91
TOP3A-204ENST00000472959 CASZ1Q86V15 1759 aa26.99■■□□□ 1.91
TOP3A-204ENST00000472959 ZBTB7AO95365 584 aa26.99■■□□□ 1.91
TOP3A-204ENST00000472959 A1BGP04217 495 aa26.99■■□□□ 1.91
TOP3A-204ENST00000472959 CANXP27824 592 aaKnown RBP26.99■■□□□ 1.91
TOP3A-204ENST00000472959 ARHGEF1Q92888 912 aaKnown RBP26.99■■□□□ 1.91
TOP3A-204ENST00000472959 SPON1Q9HCB6 807 aa26.99■■□□□ 1.91
TOP3A-204ENST00000472959 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
TOP3A-204ENST00000472959 ZNF521Q96K83 1311 aa26.98■■□□□ 1.91
TOP3A-204ENST00000472959 HOXB7P09629 217 aa26.98■■□□□ 1.91
TOP3A-204ENST00000472959 RFC4P35249 363 aa26.98■■□□□ 1.91
TOP3A-204ENST00000472959 IL6STP40189 918 aaPredicted RBP26.98■■□□□ 1.91
TOP3A-204ENST00000472959 MYH14Q7Z406 1995 aaKnown RBP26.98■■□□□ 1.91
TOP3A-204ENST00000472959 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
TOP3A-204ENST00000472959 TUBGCP6Q96RT7 1819 aa26.96■■□□□ 1.91
TOP3A-204ENST00000472959 A0A087WZG4 1122 aa26.95■■□□□ 1.9
TOP3A-204ENST00000472959 NPM2Q86SE8 214 aaKnown RBP26.95■■□□□ 1.9
TOP3A-204ENST00000472959 ERBB4Q15303 1308 aa26.94■■□□□ 1.9
TOP3A-204ENST00000472959 KRT24Q2M2I5 525 aa26.94■■□□□ 1.9
TOP3A-204ENST00000472959 DUSP27Q5VZP5 1158 aa26.94■■□□□ 1.9
TOP3A-204ENST00000472959 TSR2Q969E8 191 aaKnown RBP26.94■■□□□ 1.9
TOP3A-204ENST00000472959 MYH16Q9H6N6 1097 aa26.94■■□□□ 1.9
TOP3A-204ENST00000472959 ATF5Q9Y2D1 282 aaPredicted RBP26.94■■□□□ 1.9
TOP3A-204ENST00000472959 COL15A1P39059 1388 aa26.94■■□□□ 1.9
TOP3A-204ENST00000472959 NBPF26B4DH59 902 aa26.92■■□□□ 1.9
TOP3A-204ENST00000472959 EIF2S2P20042 333 aaKnown RBP26.92■■□□□ 1.9
TOP3A-204ENST00000472959 NBPF10Q6P3W6 841 aaKnown RBP26.92■■□□□ 1.9
TOP3A-204ENST00000472959 NBPF15Q8N660 670 aa26.92■■□□□ 1.9
TOP3A-204ENST00000472959 ZPR1O75312 459 aa26.91■■□□□ 1.9
TOP3A-204ENST00000472959 GOLGA2Q08379 1002 aa26.91■■□□□ 1.9
TOP3A-204ENST00000472959 CHMP4AQ9BY43 222 aa26.91■■□□□ 1.9
TOP3A-204ENST00000472959 USP42Q9H9J4 1324 aaKnown RBP26.9■■□□□ 1.9
TOP3A-204ENST00000472959 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
TOP3A-204ENST00000472959 NLGN1Q8N2Q7 840 aa26.9■■□□□ 1.9
TOP3A-204ENST00000472959 C8orf58Q8NAV2 365 aa26.9■■□□□ 1.9
TOP3A-204ENST00000472959 NARFQ9UHQ1 456 aa26.9■■□□□ 1.9
TOP3A-204ENST00000472959 ZNF330Q9Y3S2 320 aaPredicted RBP26.9■■□□□ 1.9
TOP3A-204ENST00000472959 PTGER2P43116 358 aa26.89■■□□□ 1.9
TOP3A-204ENST00000472959 PIP4K2AP48426 406 aaPredicted RBP26.89■■□□□ 1.9
TOP3A-204ENST00000472959 SPINK5Q9NQ38 1064 aaPredicted RBP26.89■■□□□ 1.9
TOP3A-204ENST00000472959 POLD1P28340 1107 aa26.88■■□□□ 1.89
TOP3A-204ENST00000472959 HDGFL1Q5TGJ6 251 aa26.88■■□□□ 1.89
TOP3A-204ENST00000472959 SGIP1Q9BQI5 828 aa26.88■■□□□ 1.89
TOP3A-204ENST00000472959 LAMB4A4D0S4 1761 aa26.88■■□□□ 1.89
TOP3A-204ENST00000472959 E9PSI1 815 aa26.87■■□□□ 1.89
TOP3A-204ENST00000472959 GYS1P13807 737 aa26.87■■□□□ 1.89
TOP3A-204ENST00000472959 MSL1Q68DK7 614 aa26.87■■□□□ 1.89
TOP3A-204ENST00000472959 SRP68Q9UHB9 627 aaKnown RBP26.87■■□□□ 1.89
TOP3A-204ENST00000472959 ELL2O00472 640 aaPredicted RBP26.86■■□□□ 1.89
TOP3A-204ENST00000472959 HNRNPUQ00839 825 aaKnown RBP eCLIP26.85■■□□□ 1.89
TOP3A-204ENST00000472959 PDIA6Q15084 440 aa26.85■■□□□ 1.89
TOP3A-204ENST00000472959 USPL1Q5W0Q7 1092 aa26.85■■□□□ 1.89
TOP3A-204ENST00000472959 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
TOP3A-204ENST00000472959 NECTIN2Q92692 538 aa26.85■■□□□ 1.89
TOP3A-204ENST00000472959 TBC1D2BQ9UPU7 963 aa26.85■■□□□ 1.89
TOP3A-204ENST00000472959 MYL6BP14649 208 aa26.84■■□□□ 1.89
TOP3A-204ENST00000472959 TSPYL6Q8N831 410 aa26.84■■□□□ 1.89
TOP3A-204ENST00000472959 ARXQ96QS3 562 aa26.84■■□□□ 1.89
TOP3A-204ENST00000472959 DDX21Q9NR30 783 aaKnown RBP eCLIP26.84■■□□□ 1.89
TOP3A-204ENST00000472959 LRP5O75197 1615 aa26.83■■□□□ 1.89
TOP3A-204ENST00000472959 SRCAPQ6ZRS2 3230 aa26.83■■□□□ 1.89
TOP3A-204ENST00000472959 TWISTNBQ3B726 338 aaPredicted RBP26.83■■□□□ 1.89
TOP3A-204ENST00000472959 DBF4Q9UBU7 674 aaPredicted RBP26.83■■□□□ 1.89
TOP3A-204ENST00000472959 RGL2O15211 777 aa26.82■■□□□ 1.88
TOP3A-204ENST00000472959 SLFN5Q08AF3 891 aa26.82■■□□□ 1.88
TOP3A-204ENST00000472959 PPP1R1BQ9UD71 204 aaPredicted RBP26.82■■□□□ 1.88
TOP3A-204ENST00000472959 CAMTA2O94983 1202 aa26.81■■□□□ 1.88
TOP3A-204ENST00000472959 EXOSC9Q06265 439 aaKnown RBP26.81■■□□□ 1.88
TOP3A-204ENST00000472959 FKBP8Q14318 412 aa26.81■■□□□ 1.88
TOP3A-204ENST00000472959 CCDC30Q5VVM6 783 aa26.81■■□□□ 1.88
TOP3A-204ENST00000472959 LRP10Q7Z4F1 713 aa26.81■■□□□ 1.88
TOP3A-204ENST00000472959 CHPF2Q9P2E5 772 aa26.81■■□□□ 1.88
TOP3A-204ENST00000472959 C4AP0C0L4 1744 aa26.8■■□□□ 1.88
TOP3A-204ENST00000472959 PROSER3Q2NL68 480 aa26.8■■□□□ 1.88
TOP3A-204ENST00000472959 BCL2L12Q9HB09 334 aa26.8■■□□□ 1.88
TOP3A-204ENST00000472959 MMP10P09238 476 aa26.79■■□□□ 1.88
TOP3A-204ENST00000472959 HYPKQ9NX55 129 aa26.79■■□□□ 1.88
TOP3A-204ENST00000472959 CLEC4GQ6UXB4 293 aa26.78■■□□□ 1.88
TOP3A-204ENST00000472959 KIF6Q6ZMV9 814 aa26.78■■□□□ 1.88
TOP3A-204ENST00000472959 CDCA7LQ96GN5 454 aa26.78■■□□□ 1.88
TOP3A-204ENST00000472959 ZNF652Q9Y2D9 606 aa26.78■■□□□ 1.88
TOP3A-204ENST00000472959 COL24A1Q17RW2 1714 aa26.78■■□□□ 1.88
TOP3A-204ENST00000472959 ERVV-1B6SEH8 477 aa26.77■■□□□ 1.88
TOP3A-204ENST00000472959 ANXA1P04083 346 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms