RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 IFT57Q9NWB7 429 aa32.86■■■□□ 2.85
COL15A1-203ENST00000471477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.85■■■□□ 2.85
COL15A1-203ENST00000471477 LRP5O75197 1615 aa32.85■■■□□ 2.85
COL15A1-203ENST00000471477 ZNF853P0CG23 659 aa32.85■■■□□ 2.85
COL15A1-203ENST00000471477 SSFA2P28290 1259 aa32.85■■■□□ 2.85
COL15A1-203ENST00000471477 COL23A1Q86Y22 540 aaPredicted RBP32.85■■■□□ 2.85
COL15A1-203ENST00000471477 RTCBQ9Y3I0 505 aaKnown RBP32.85■■■□□ 2.85
COL15A1-203ENST00000471477 USP16Q9Y5T5 823 aa32.85■■■□□ 2.85
COL15A1-203ENST00000471477 C4AP0C0L4 1744 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 RPS6KA4O75676 772 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 GNAI1P63096 354 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 NGEFQ8N5V2 710 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 FLAD1Q8NFF5 587 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 MBIPQ9NS73 344 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 ZBTB1Q9Y2K1 713 aa32.84■■■□□ 2.85
COL15A1-203ENST00000471477 MSH5O43196 834 aa32.83■■■□□ 2.85
COL15A1-203ENST00000471477 GIGYF1O75420 1035 aaPredicted RBP32.83■■■□□ 2.85
COL15A1-203ENST00000471477 ZBTB7AO95365 584 aa32.81■■■□□ 2.84
COL15A1-203ENST00000471477 SOS1Q07889 1333 aaPredicted RBP32.79■■■□□ 2.84
COL15A1-203ENST00000471477 IL16Q14005 1332 aa32.79■■■□□ 2.84
COL15A1-203ENST00000471477 A1BGP04217 495 aa32.78■■■□□ 2.84
COL15A1-203ENST00000471477 CANXP27824 592 aaKnown RBP32.78■■■□□ 2.84
COL15A1-203ENST00000471477 KRT24Q2M2I5 525 aa32.78■■■□□ 2.84
COL15A1-203ENST00000471477 WDR63Q8IWG1 891 aa32.78■■■□□ 2.84
COL15A1-203ENST00000471477 ADRA2BP18089 450 aa32.77■■■□□ 2.84
COL15A1-203ENST00000471477 TRAPPC3LQ5T215 181 aa32.77■■■□□ 2.84
COL15A1-203ENST00000471477 SLC16A10Q8TF71 515 aa32.77■■■□□ 2.84
COL15A1-203ENST00000471477 MTFR1LQ9H019 292 aa32.77■■■□□ 2.84
COL15A1-203ENST00000471477 ARHGEF1Q92888 912 aaKnown RBP32.76■■■□□ 2.83
COL15A1-203ENST00000471477 SPON1Q9HCB6 807 aa32.76■■■□□ 2.83
COL15A1-203ENST00000471477 COL24A1Q17RW2 1714 aa32.75■■■□□ 2.83
COL15A1-203ENST00000471477 COL15A1P39059 1388 aa32.75■■■□□ 2.83
COL15A1-203ENST00000471477 PIP4K2AP48426 406 aaPredicted RBP32.74■■■□□ 2.83
COL15A1-203ENST00000471477 TSR2Q969E8 191 aaKnown RBP32.74■■■□□ 2.83
COL15A1-203ENST00000471477 ATF5Q9Y2D1 282 aaPredicted RBP32.74■■■□□ 2.83
COL15A1-203ENST00000471477 ZNF521Q96K83 1311 aa32.73■■■□□ 2.83
COL15A1-203ENST00000471477 SRCAPQ6ZRS2 3230 aa32.71■■■□□ 2.83
COL15A1-203ENST00000471477 RFC4P35249 363 aa32.71■■■□□ 2.83
COL15A1-203ENST00000471477 ZNF330Q9Y3S2 320 aaPredicted RBP32.71■■■□□ 2.83
COL15A1-203ENST00000471477 IL6STP40189 918 aaPredicted RBP32.7■■■□□ 2.83
COL15A1-203ENST00000471477 EIF5P55010 431 aaKnown RBP32.7■■■□□ 2.83
COL15A1-203ENST00000471477 MSL1Q68DK7 614 aa32.69■■■□□ 2.82
COL15A1-203ENST00000471477 SPINK5Q9NQ38 1064 aaPredicted RBP32.69■■■□□ 2.82
COL15A1-203ENST00000471477 NBPF26B4DH59 902 aa32.68■■■□□ 2.82
COL15A1-203ENST00000471477 EIF2S2P20042 333 aaKnown RBP32.68■■■□□ 2.82
COL15A1-203ENST00000471477 NBPF10Q6P3W6 841 aaKnown RBP32.68■■■□□ 2.82
COL15A1-203ENST00000471477 NBPF15Q8N660 670 aa32.68■■■□□ 2.82
COL15A1-203ENST00000471477 DUSP27Q5VZP5 1158 aa32.68■■■□□ 2.82
COL15A1-203ENST00000471477 FANCIQ9NVI1 1328 aa32.67■■■□□ 2.82
COL15A1-203ENST00000471477 SRP68Q9UHB9 627 aaKnown RBP32.67■■■□□ 2.82
COL15A1-203ENST00000471477 USP42Q9H9J4 1324 aaKnown RBP32.67■■■□□ 2.82
COL15A1-203ENST00000471477 HOXB7P09629 217 aa32.66■■■□□ 2.82
COL15A1-203ENST00000471477 PTGER2P43116 358 aa32.66■■■□□ 2.82
COL15A1-203ENST00000471477 C8orf58Q8NAV2 365 aa32.65■■■□□ 2.82
COL15A1-203ENST00000471477 NECTIN2Q92692 538 aa32.65■■■□□ 2.82
COL15A1-203ENST00000471477 SCN7AQ01118 1682 aa32.64■■■□□ 2.82
COL15A1-203ENST00000471477 ELL2O00472 640 aaPredicted RBP32.64■■■□□ 2.82
COL15A1-203ENST00000471477 A0A087WZG4 1122 aa32.63■■■□□ 2.81
COL15A1-203ENST00000471477 GYS1P13807 737 aa32.63■■■□□ 2.81
COL15A1-203ENST00000471477 NPM2Q86SE8 214 aaKnown RBP32.63■■■□□ 2.81
COL15A1-203ENST00000471477 SGIP1Q9BQI5 828 aa32.63■■■□□ 2.81
COL15A1-203ENST00000471477 ERBB4Q15303 1308 aa32.63■■■□□ 2.81
COL15A1-203ENST00000471477 BCORQ6W2J9 1755 aa32.63■■■□□ 2.81
COL15A1-203ENST00000471477 ZPR1O75312 459 aa32.62■■■□□ 2.81
COL15A1-203ENST00000471477 NARFQ9UHQ1 456 aa32.62■■■□□ 2.81
COL15A1-203ENST00000471477 GOLGA2Q08379 1002 aa32.61■■■□□ 2.81
COL15A1-203ENST00000471477 HDGFL1Q5TGJ6 251 aa32.61■■■□□ 2.81
COL15A1-203ENST00000471477 MYH16Q9H6N6 1097 aa32.61■■■□□ 2.81
COL15A1-203ENST00000471477 MYL6BP14649 208 aa32.6■■■□□ 2.81
COL15A1-203ENST00000471477 USPL1Q5W0Q7 1092 aa32.6■■■□□ 2.81
COL15A1-203ENST00000471477 TSPYL6Q8N831 410 aa32.6■■■□□ 2.81
COL15A1-203ENST00000471477 TBC1D2BQ9UPU7 963 aa32.6■■■□□ 2.81
COL15A1-203ENST00000471477 HNRNPUQ00839 825 aaKnown RBP eCLIP32.6■■■□□ 2.81
COL15A1-203ENST00000471477 ARXQ96QS3 562 aa32.6■■■□□ 2.81
COL15A1-203ENST00000471477 POLD1P28340 1107 aa32.59■■■□□ 2.81
COL15A1-203ENST00000471477 PDIA6Q15084 440 aa32.59■■■□□ 2.81
COL15A1-203ENST00000471477 DZIP3Q86Y13 1208 aaKnown RBP32.58■■■□□ 2.81
COL15A1-203ENST00000471477 PPP1R1BQ9UD71 204 aaPredicted RBP32.58■■■□□ 2.81
COL15A1-203ENST00000471477 ANXA1P04083 346 aa32.57■■■□□ 2.8
COL15A1-203ENST00000471477 PROSER3Q2NL68 480 aa32.57■■■□□ 2.8
COL15A1-203ENST00000471477 FKBP8Q14318 412 aa32.56■■■□□ 2.8
COL15A1-203ENST00000471477 NLGN1Q8N2Q7 840 aa32.56■■■□□ 2.8
COL15A1-203ENST00000471477 CHPF2Q9P2E5 772 aa32.56■■■□□ 2.8
COL15A1-203ENST00000471477 E9PSI1 815 aa32.55■■■□□ 2.8
COL15A1-203ENST00000471477 EXOSC9Q06265 439 aaKnown RBP32.55■■■□□ 2.8
COL15A1-203ENST00000471477 TWISTNBQ3B726 338 aaPredicted RBP32.55■■■□□ 2.8
COL15A1-203ENST00000471477 BCL2L12Q9HB09 334 aa32.55■■■□□ 2.8
COL15A1-203ENST00000471477 LRP10Q7Z4F1 713 aa32.54■■■□□ 2.8
COL15A1-203ENST00000471477 DDX21Q9NR30 783 aaKnown RBP eCLIP32.54■■■□□ 2.8
COL15A1-203ENST00000471477 CAMTA2O94983 1202 aa32.53■■■□□ 2.8
COL15A1-203ENST00000471477 CDCA7LQ96GN5 454 aa32.53■■■□□ 2.8
COL15A1-203ENST00000471477 SLFN5Q08AF3 891 aa32.52■■■□□ 2.8
COL15A1-203ENST00000471477 MMP10P09238 476 aa32.51■■■□□ 2.8
COL15A1-203ENST00000471477 DBF4Q9UBU7 674 aaPredicted RBP32.51■■■□□ 2.8
COL15A1-203ENST00000471477 TTLL7Q6ZT98 887 aa32.51■■■□□ 2.79
COL15A1-203ENST00000471477 NUP98P52948 1817 aa32.5■■■□□ 2.79
COL15A1-203ENST00000471477 CCDC30Q5VVM6 783 aa32.49■■■□□ 2.79
COL15A1-203ENST00000471477 KIF6Q6ZMV9 814 aa32.48■■■□□ 2.79
COL15A1-203ENST00000471477 CHMP4AQ9BY43 222 aa32.47■■■□□ 2.79
COL15A1-203ENST00000471477 VAMP4O75379 141 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms