RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 ZNF853P0CG23 659 aa30.15■■■□□ 2.42
SNX21-208ENST00000466252 CCDC87Q9NVE4 849 aa30.15■■■□□ 2.42
SNX21-208ENST00000466252 TSPYL4Q9UJ04 414 aa30.15■■■□□ 2.42
SNX21-208ENST00000466252 WWC1Q8IX03 1113 aa30.14■■■□□ 2.42
SNX21-208ENST00000466252 CFAP44Q96MT7 982 aa30.14■■■□□ 2.42
SNX21-208ENST00000466252 GIGYF1O75420 1035 aaPredicted RBP30.13■■■□□ 2.41
SNX21-208ENST00000466252 TRAPPC3LQ5T215 181 aa30.13■■■□□ 2.41
SNX21-208ENST00000466252 ARHGEF1Q92888 912 aaKnown RBP30.13■■■□□ 2.41
SNX21-208ENST00000466252 MTFR1LQ9H019 292 aa30.13■■■□□ 2.41
SNX21-208ENST00000466252 SPON1Q9HCB6 807 aa30.13■■■□□ 2.41
SNX21-208ENST00000466252 ATF5Q9Y2D1 282 aaPredicted RBP30.13■■■□□ 2.41
SNX21-208ENST00000466252 PHF14O94880 888 aa30.12■■■□□ 2.41
SNX21-208ENST00000466252 SGIP1Q9BQI5 828 aa30.11■■■□□ 2.41
SNX21-208ENST00000466252 ZBTB1Q9Y2K1 713 aa30.11■■■□□ 2.41
SNX21-208ENST00000466252 A1BGP04217 495 aa30.1■■■□□ 2.41
SNX21-208ENST00000466252 ADRA2BP18089 450 aa30.1■■■□□ 2.41
SNX21-208ENST00000466252 PTGER2P43116 358 aa30.1■■■□□ 2.41
SNX21-208ENST00000466252 LAS1LQ9Y4W2 734 aaKnown RBP30.1■■■□□ 2.41
SNX21-208ENST00000466252 MSH5O43196 834 aa30.09■■■□□ 2.41
SNX21-208ENST00000466252 CALD1Q05682 793 aaKnown RBP30.08■■■□□ 2.41
SNX21-208ENST00000466252 IFT57Q9NWB7 429 aa30.08■■■□□ 2.41
SNX21-208ENST00000466252 SOS1Q07889 1333 aaPredicted RBP30.07■■■□□ 2.4
SNX21-208ENST00000466252 NGEFQ8N5V2 710 aa30.07■■■□□ 2.4
SNX21-208ENST00000466252 COL24A1Q17RW2 1714 aa30.07■■■□□ 2.4
SNX21-208ENST00000466252 CANXP27824 592 aaKnown RBP30.06■■■□□ 2.4
SNX21-208ENST00000466252 EIF5P55010 431 aaKnown RBP30.06■■■□□ 2.4
SNX21-208ENST00000466252 SALL2Q9Y467 1007 aaPredicted RBP30.06■■■□□ 2.4
SNX21-208ENST00000466252 LRP5O75197 1615 aa30.05■■■□□ 2.4
SNX21-208ENST00000466252 GNAI1P63096 354 aa30.05■■■□□ 2.4
SNX21-208ENST00000466252 MBIPQ9NS73 344 aa30.05■■■□□ 2.4
SNX21-208ENST00000466252 RFC4P35249 363 aa30.03■■■□□ 2.4
SNX21-208ENST00000466252 WDR63Q8IWG1 891 aa30.03■■■□□ 2.4
SNX21-208ENST00000466252 NBPF26B4DH59 902 aa30.02■■■□□ 2.4
SNX21-208ENST00000466252 IL6STP40189 918 aaPredicted RBP30.02■■■□□ 2.4
SNX21-208ENST00000466252 KRT24Q2M2I5 525 aa30.02■■■□□ 2.4
SNX21-208ENST00000466252 NBPF10Q6P3W6 841 aaKnown RBP30.02■■■□□ 2.4
SNX21-208ENST00000466252 NBPF15Q8N660 670 aa30.02■■■□□ 2.4
SNX21-208ENST00000466252 IL16Q14005 1332 aa30.01■■■□□ 2.4
SNX21-208ENST00000466252 SRCAPQ6ZRS2 3230 aa30.01■■■□□ 2.39
SNX21-208ENST00000466252 GYS1P13807 737 aa29.99■■■□□ 2.39
SNX21-208ENST00000466252 PIP4K2AP48426 406 aaPredicted RBP29.98■■■□□ 2.39
SNX21-208ENST00000466252 MSL1Q68DK7 614 aa29.98■■■□□ 2.39
SNX21-208ENST00000466252 SRP68Q9UHB9 627 aaKnown RBP29.98■■■□□ 2.39
SNX21-208ENST00000466252 ZNF521Q96K83 1311 aa29.97■■■□□ 2.39
SNX21-208ENST00000466252 USP42Q9H9J4 1324 aaKnown RBP29.97■■■□□ 2.39
SNX21-208ENST00000466252 C4AP0C0L4 1744 aa29.97■■■□□ 2.39
SNX21-208ENST00000466252 NARFQ9UHQ1 456 aa29.97■■■□□ 2.39
SNX21-208ENST00000466252 COL15A1P39059 1388 aa29.96■■■□□ 2.39
SNX21-208ENST00000466252 NLGN1Q8N2Q7 840 aa29.96■■■□□ 2.39
SNX21-208ENST00000466252 LAMB4A4D0S4 1761 aa29.95■■■□□ 2.38
SNX21-208ENST00000466252 A0A087WZG4 1122 aa29.94■■■□□ 2.38
SNX21-208ENST00000466252 PDIA6Q15084 440 aa29.94■■■□□ 2.38
SNX21-208ENST00000466252 BCL2L12Q9HB09 334 aa29.94■■■□□ 2.38
SNX21-208ENST00000466252 SPINK5Q9NQ38 1064 aaPredicted RBP29.94■■■□□ 2.38
SNX21-208ENST00000466252 EIF2S2P20042 333 aaKnown RBP29.93■■■□□ 2.38
SNX21-208ENST00000466252 DUSP27Q5VZP5 1158 aa29.93■■■□□ 2.38
SNX21-208ENST00000466252 USPL1Q5W0Q7 1092 aa29.93■■■□□ 2.38
SNX21-208ENST00000466252 C8orf58Q8NAV2 365 aa29.93■■■□□ 2.38
SNX21-208ENST00000466252 ZPR1O75312 459 aa29.92■■■□□ 2.38
SNX21-208ENST00000466252 HOXB7P09629 217 aa29.92■■■□□ 2.38
SNX21-208ENST00000466252 POLD1P28340 1107 aa29.92■■■□□ 2.38
SNX21-208ENST00000466252 TSR2Q969E8 191 aaKnown RBP29.92■■■□□ 2.38
SNX21-208ENST00000466252 ARXQ96QS3 562 aa29.92■■■□□ 2.38
SNX21-208ENST00000466252 TBC1D2BQ9UPU7 963 aa29.92■■■□□ 2.38
SNX21-208ENST00000466252 FKBP8Q14318 412 aa29.91■■■□□ 2.38
SNX21-208ENST00000466252 LRP10Q7Z4F1 713 aa29.91■■■□□ 2.38
SNX21-208ENST00000466252 ERBB4Q15303 1308 aa29.91■■■□□ 2.38
SNX21-208ENST00000466252 TM4SF1P30408 202 aa29.9■■■□□ 2.38
SNX21-208ENST00000466252 ZNF330Q9Y3S2 320 aaPredicted RBP29.89■■■□□ 2.38
SNX21-208ENST00000466252 ELL2O00472 640 aaPredicted RBP29.88■■■□□ 2.37
SNX21-208ENST00000466252 PPP1R1BQ9UD71 204 aaPredicted RBP29.88■■■□□ 2.37
SNX21-208ENST00000466252 CAMTA2O94983 1202 aa29.87■■■□□ 2.37
SNX21-208ENST00000466252 DZIP3Q86Y13 1208 aaKnown RBP29.87■■■□□ 2.37
SNX21-208ENST00000466252 TSPYL6Q8N831 410 aa29.87■■■□□ 2.37
SNX21-208ENST00000466252 MMP10P09238 476 aa29.86■■■□□ 2.37
SNX21-208ENST00000466252 MYL6BP14649 208 aa29.86■■■□□ 2.37
SNX21-208ENST00000466252 NECTIN2Q92692 538 aa29.86■■■□□ 2.37
SNX21-208ENST00000466252 PROSER3Q2NL68 480 aa29.85■■■□□ 2.37
SNX21-208ENST00000466252 NPM2Q86SE8 214 aaKnown RBP29.85■■■□□ 2.37
SNX21-208ENST00000466252 DDX21Q9NR30 783 aaKnown RBP eCLIP29.84■■■□□ 2.37
SNX21-208ENST00000466252 FANCIQ9NVI1 1328 aa29.84■■■□□ 2.37
SNX21-208ENST00000466252 HDGFL1Q5TGJ6 251 aa29.83■■■□□ 2.37
SNX21-208ENST00000466252 ANXA1P04083 346 aa29.82■■■□□ 2.36
SNX21-208ENST00000466252 TTLL7Q6ZT98 887 aa29.82■■■□□ 2.36
SNX21-208ENST00000466252 SYT17Q9BSW7 474 aa29.82■■■□□ 2.36
SNX21-208ENST00000466252 FHDC1Q9C0D6 1143 aaPredicted RBP29.82■■■□□ 2.36
SNX21-208ENST00000466252 GOLGA2Q08379 1002 aa29.81■■■□□ 2.36
SNX21-208ENST00000466252 NFIXQ14938 502 aa29.81■■■□□ 2.36
SNX21-208ENST00000466252 RGL2O15211 777 aa29.8■■■□□ 2.36
SNX21-208ENST00000466252 DDR1Q08345 913 aa29.8■■■□□ 2.36
SNX21-208ENST00000466252 CLEC4GQ6UXB4 293 aa29.8■■■□□ 2.36
SNX21-208ENST00000466252 CHPF2Q9P2E5 772 aa29.8■■■□□ 2.36
SNX21-208ENST00000466252 TBC1D9BQ66K14 1250 aa29.79■■■□□ 2.36
SNX21-208ENST00000466252 MYH16Q9H6N6 1097 aa29.79■■■□□ 2.36
SNX21-208ENST00000466252 DBF4Q9UBU7 674 aaPredicted RBP29.79■■■□□ 2.36
SNX21-208ENST00000466252 ERVV-1B6SEH8 477 aa29.78■■■□□ 2.36
SNX21-208ENST00000466252 POLRMTO00411 1230 aaKnown RBP29.78■■■□□ 2.36
SNX21-208ENST00000466252 VAMP4O75379 141 aa29.78■■■□□ 2.36
SNX21-208ENST00000466252 EXOSC9Q06265 439 aaKnown RBP29.78■■■□□ 2.36
SNX21-208ENST00000466252 SLFN5Q08AF3 891 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms