RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
CHPF2-202ENST00000465601 CHL1O00533 1208 aa16.19■□□□□ 0.18
CHPF2-202ENST00000465601 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
CHPF2-202ENST00000465601 SSFA2P28290 1259 aa16.19■□□□□ 0.18
CHPF2-202ENST00000465601 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
CHPF2-202ENST00000465601 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
CHPF2-202ENST00000465601 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
CHPF2-202ENST00000465601 MTFR1LQ9H019 292 aa16.19■□□□□ 0.18
CHPF2-202ENST00000465601 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
CHPF2-202ENST00000465601 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CHPF2-202ENST00000465601 A1BGP04217 495 aa16.17■□□□□ 0.18
CHPF2-202ENST00000465601 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
CHPF2-202ENST00000465601 ARHGEF1Q92888 912 aaKnown RBP16.17■□□□□ 0.18
CHPF2-202ENST00000465601 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
CHPF2-202ENST00000465601 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
CHPF2-202ENST00000465601 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
CHPF2-202ENST00000465601 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
CHPF2-202ENST00000465601 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
CHPF2-202ENST00000465601 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
CHPF2-202ENST00000465601 ADRA2BP18089 450 aa16.15■□□□□ 0.18
CHPF2-202ENST00000465601 RFC4P35249 363 aa16.15■□□□□ 0.18
CHPF2-202ENST00000465601 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
CHPF2-202ENST00000465601 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
CHPF2-202ENST00000465601 PTGER2P43116 358 aa16.14■□□□□ 0.17
CHPF2-202ENST00000465601 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.17
CHPF2-202ENST00000465601 GNAI1P63096 354 aa16.14■□□□□ 0.17
CHPF2-202ENST00000465601 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
CHPF2-202ENST00000465601 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
CHPF2-202ENST00000465601 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
CHPF2-202ENST00000465601 LRP5O75197 1615 aa16.13■□□□□ 0.17
CHPF2-202ENST00000465601 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
CHPF2-202ENST00000465601 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
CHPF2-202ENST00000465601 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
CHPF2-202ENST00000465601 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
CHPF2-202ENST00000465601 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
CHPF2-202ENST00000465601 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
CHPF2-202ENST00000465601 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
CHPF2-202ENST00000465601 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
CHPF2-202ENST00000465601 POLD1P28340 1107 aa16.11■□□□□ 0.17
CHPF2-202ENST00000465601 IL6STP40189 918 aaPredicted RBP16.11■□□□□ 0.17
CHPF2-202ENST00000465601 COL15A1P39059 1388 aa16.11■□□□□ 0.17
CHPF2-202ENST00000465601 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
CHPF2-202ENST00000465601 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
CHPF2-202ENST00000465601 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
CHPF2-202ENST00000465601 ARXQ96QS3 562 aa16.1■□□□□ 0.17
CHPF2-202ENST00000465601 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
CHPF2-202ENST00000465601 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
CHPF2-202ENST00000465601 ZPR1O75312 459 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 GYS1P13807 737 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 USPL1Q5W0Q7 1092 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
CHPF2-202ENST00000465601 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
CHPF2-202ENST00000465601 NARFQ9UHQ1 456 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
CHPF2-202ENST00000465601 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
CHPF2-202ENST00000465601 A0A087WZG4 1122 aa16.08■□□□□ 0.16
CHPF2-202ENST00000465601 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
CHPF2-202ENST00000465601 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
CHPF2-202ENST00000465601 IL16Q14005 1332 aa16.08■□□□□ 0.16
CHPF2-202ENST00000465601 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
CHPF2-202ENST00000465601 FKBP8Q14318 412 aa16.07■□□□□ 0.16
CHPF2-202ENST00000465601 MMP10P09238 476 aa16.06■□□□□ 0.16
CHPF2-202ENST00000465601 MYL6BP14649 208 aa16.06■□□□□ 0.16
CHPF2-202ENST00000465601 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
CHPF2-202ENST00000465601 BCL2L12Q9HB09 334 aa16.06■□□□□ 0.16
CHPF2-202ENST00000465601 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
CHPF2-202ENST00000465601 ANXA1P04083 346 aa16.05■□□□□ 0.16
CHPF2-202ENST00000465601 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
CHPF2-202ENST00000465601 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 HOXB7P09629 217 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 PDIA6Q15084 440 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
CHPF2-202ENST00000465601 ERBB4Q15303 1308 aa16.03■□□□□ 0.16
CHPF2-202ENST00000465601 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
CHPF2-202ENST00000465601 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
CHPF2-202ENST00000465601 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
CHPF2-202ENST00000465601 TM4SF1P30408 202 aa16.02■□□□□ 0.16
CHPF2-202ENST00000465601 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
CHPF2-202ENST00000465601 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
CHPF2-202ENST00000465601 DDR1Q08345 913 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 NFIXQ14938 502 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 LRP10Q7Z4F1 713 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHPF2-202ENST00000465601 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
CHPF2-202ENST00000465601 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
CHPF2-202ENST00000465601 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
CHPF2-202ENST00000465601 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
CHPF2-202ENST00000465601 NUP98P52948 1817 aa15.99■□□□□ 0.15
CHPF2-202ENST00000465601 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
CHPF2-202ENST00000465601 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
CHPF2-202ENST00000465601 HLFQ16534 295 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms