RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
NUP58-207ENST00000465068 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
NUP58-207ENST00000465068 WDR63Q8IWG1 891 aa17.85■□□□□ 0.45
NUP58-207ENST00000465068 TEX13AQ9BXU3 409 aaPredicted RBP17.85■□□□□ 0.45
NUP58-207ENST00000465068 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
NUP58-207ENST00000465068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
NUP58-207ENST00000465068 GNPATO15228 680 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 SSFA2P28290 1259 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 CCDC87Q9NVE4 849 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
NUP58-207ENST00000465068 NBPF26B4DH59 902 aa17.83■□□□□ 0.44
NUP58-207ENST00000465068 A1BGP04217 495 aa17.83■□□□□ 0.44
NUP58-207ENST00000465068 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.44
NUP58-207ENST00000465068 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.44
NUP58-207ENST00000465068 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
NUP58-207ENST00000465068 AK7Q96M32 723 aa17.83■□□□□ 0.44
NUP58-207ENST00000465068 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
NUP58-207ENST00000465068 STARD3NLO95772 234 aa17.82■□□□□ 0.44
NUP58-207ENST00000465068 GNAI1P63096 354 aa17.82■□□□□ 0.44
NUP58-207ENST00000465068 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
NUP58-207ENST00000465068 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
NUP58-207ENST00000465068 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
NUP58-207ENST00000465068 ADRA2BP18089 450 aa17.81■□□□□ 0.44
NUP58-207ENST00000465068 PTGER2P43116 358 aa17.81■□□□□ 0.44
NUP58-207ENST00000465068 PDIA6Q15084 440 aa17.81■□□□□ 0.44
NUP58-207ENST00000465068 RTCBQ9Y3I0 505 aaKnown RBP17.81■□□□□ 0.44
NUP58-207ENST00000465068 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
NUP58-207ENST00000465068 FLAD1Q8NFF5 587 aa17.8■□□□□ 0.44
NUP58-207ENST00000465068 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
NUP58-207ENST00000465068 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
NUP58-207ENST00000465068 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
NUP58-207ENST00000465068 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
NUP58-207ENST00000465068 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
NUP58-207ENST00000465068 ZBTB7AO95365 584 aa17.78■□□□□ 0.44
NUP58-207ENST00000465068 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
NUP58-207ENST00000465068 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
NUP58-207ENST00000465068 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
NUP58-207ENST00000465068 PHF14O94880 888 aa17.77■□□□□ 0.44
NUP58-207ENST00000465068 HOXB7P09629 217 aa17.77■□□□□ 0.44
NUP58-207ENST00000465068 PIP4K2AP48426 406 aaPredicted RBP17.77■□□□□ 0.44
NUP58-207ENST00000465068 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
NUP58-207ENST00000465068 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
NUP58-207ENST00000465068 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
NUP58-207ENST00000465068 CANXP27824 592 aaKnown RBP17.76■□□□□ 0.43
NUP58-207ENST00000465068 DUSP27Q5VZP5 1158 aa17.76■□□□□ 0.43
NUP58-207ENST00000465068 GYS1P13807 737 aa17.75■□□□□ 0.43
NUP58-207ENST00000465068 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
NUP58-207ENST00000465068 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
NUP58-207ENST00000465068 COL15A1P39059 1388 aa17.75■□□□□ 0.43
NUP58-207ENST00000465068 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
NUP58-207ENST00000465068 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
NUP58-207ENST00000465068 PROSER3Q2NL68 480 aa17.74■□□□□ 0.43
NUP58-207ENST00000465068 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
NUP58-207ENST00000465068 ERBB4Q15303 1308 aa17.73■□□□□ 0.43
NUP58-207ENST00000465068 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
NUP58-207ENST00000465068 SPON1Q9HCB6 807 aa17.73■□□□□ 0.43
NUP58-207ENST00000465068 LAMB4A4D0S4 1761 aa17.73■□□□□ 0.43
NUP58-207ENST00000465068 CAMTA2O94983 1202 aa17.72■□□□□ 0.43
NUP58-207ENST00000465068 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
NUP58-207ENST00000465068 LRP5O75197 1615 aa17.72■□□□□ 0.43
NUP58-207ENST00000465068 VAMP4O75379 141 aa17.71■□□□□ 0.43
NUP58-207ENST00000465068 EIF2S2P20042 333 aaKnown RBP17.71■□□□□ 0.43
NUP58-207ENST00000465068 TM4SF1P30408 202 aa17.71■□□□□ 0.43
NUP58-207ENST00000465068 RFC4P35249 363 aa17.71■□□□□ 0.43
NUP58-207ENST00000465068 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
NUP58-207ENST00000465068 FKBP8Q14318 412 aa17.71■□□□□ 0.43
NUP58-207ENST00000465068 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
NUP58-207ENST00000465068 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
NUP58-207ENST00000465068 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
NUP58-207ENST00000465068 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
NUP58-207ENST00000465068 DDX21Q9NR30 783 aaKnown RBP eCLIP17.7■□□□□ 0.42
NUP58-207ENST00000465068 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
NUP58-207ENST00000465068 A0A087WZG4 1122 aa17.69■□□□□ 0.42
NUP58-207ENST00000465068 E9PSI1 815 aa17.69■□□□□ 0.42
NUP58-207ENST00000465068 MSH5O43196 834 aa17.69■□□□□ 0.42
NUP58-207ENST00000465068 ANXA1P04083 346 aa17.69■□□□□ 0.42
NUP58-207ENST00000465068 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
NUP58-207ENST00000465068 RGL2O15211 777 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 NECTIN2Q92692 538 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
NUP58-207ENST00000465068 DDR1Q08345 913 aa17.67■□□□□ 0.42
NUP58-207ENST00000465068 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
NUP58-207ENST00000465068 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
NUP58-207ENST00000465068 MYL6BP14649 208 aa17.66■□□□□ 0.42
NUP58-207ENST00000465068 HLFQ16534 295 aa17.66■□□□□ 0.42
NUP58-207ENST00000465068 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
NUP58-207ENST00000465068 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
NUP58-207ENST00000465068 ZPR1O75312 459 aa17.65■□□□□ 0.42
NUP58-207ENST00000465068 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
NUP58-207ENST00000465068 NFIXQ14938 502 aa17.65■□□□□ 0.42
NUP58-207ENST00000465068 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
NUP58-207ENST00000465068 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.41
NUP58-207ENST00000465068 MMP10P09238 476 aa17.64■□□□□ 0.41
NUP58-207ENST00000465068 TBC1D9BQ66K14 1250 aa17.64■□□□□ 0.41
NUP58-207ENST00000465068 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms