RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
NUDCD3-204ENST00000464812 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
NUDCD3-204ENST00000464812 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-204ENST00000464812 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
NUDCD3-204ENST00000464812 CACNA1FO60840 1977 aa11.65□□□□□ -0.54
NUDCD3-204ENST00000464812 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
NUDCD3-204ENST00000464812 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
NUDCD3-204ENST00000464812 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
NUDCD3-204ENST00000464812 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
NUDCD3-204ENST00000464812 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
NUDCD3-204ENST00000464812 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-204ENST00000464812 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
NUDCD3-204ENST00000464812 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
NUDCD3-204ENST00000464812 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
NUDCD3-204ENST00000464812 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
NUDCD3-204ENST00000464812 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
NUDCD3-204ENST00000464812 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-204ENST00000464812 SGIP1Q9BQI5 828 aa11.63□□□□□ -0.55
NUDCD3-204ENST00000464812 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-204ENST00000464812 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-204ENST00000464812 PTGER2P43116 358 aa11.61□□□□□ -0.55
NUDCD3-204ENST00000464812 TWISTNBQ3B726 338 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-204ENST00000464812 SLC27A3Q5K4L6 730 aa11.61□□□□□ -0.55
NUDCD3-204ENST00000464812 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-204ENST00000464812 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-204ENST00000464812 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
NUDCD3-204ENST00000464812 VAMP4O75379 141 aa11.6□□□□□ -0.55
NUDCD3-204ENST00000464812 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-204ENST00000464812 SIK1P57059 783 aa11.6□□□□□ -0.55
NUDCD3-204ENST00000464812 UTRNP46939 3433 aa11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
NUDCD3-204ENST00000464812 C4AP0C0L4 1744 aa11.58□□□□□ -0.56
NUDCD3-204ENST00000464812 ZBTB7AO95365 584 aa11.58□□□□□ -0.56
NUDCD3-204ENST00000464812 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
NUDCD3-204ENST00000464812 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
NUDCD3-204ENST00000464812 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
NUDCD3-204ENST00000464812 BCORQ6W2J9 1755 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 CAPN15O75808 1086 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 BCAR3O75815 825 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 SSH1Q8WYL5 1049 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
NUDCD3-204ENST00000464812 HOXB7P09629 217 aa11.56□□□□□ -0.56
NUDCD3-204ENST00000464812 CT47B1P0C2W7 299 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-204ENST00000464812 DNAJC10Q8IXB1 793 aa11.56□□□□□ -0.56
NUDCD3-204ENST00000464812 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-204ENST00000464812 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
NUDCD3-204ENST00000464812 ANXA1P04083 346 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 HDGFL1Q5TGJ6 251 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
NUDCD3-204ENST00000464812 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 G2E3Q7L622 706 aa11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 SMC4Q9NTJ3 1288 aa11.54□□□□□ -0.56
NUDCD3-204ENST00000464812 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 DSG3P32926 999 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 PDIA6Q15084 440 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-204ENST00000464812 NUP98P52948 1817 aa11.52□□□□□ -0.57
NUDCD3-204ENST00000464812 PLIN1O60240 522 aa11.52□□□□□ -0.57
NUDCD3-204ENST00000464812 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-204ENST00000464812 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-204ENST00000464812 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.57
NUDCD3-204ENST00000464812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 A1BGP04217 495 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 KIAA1551Q9HCM1 1747 aa11.51□□□□□ -0.57
NUDCD3-204ENST00000464812 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms