RNA–Protein interactions for RNA: ENST00000464392.1

HLA-DMA-206, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-206ENST00000464392 USP16Q9Y5T5 823 aa21.67■■□□□ 1.06
HLA-DMA-206ENST00000464392 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
HLA-DMA-206ENST00000464392 FAM9BQ8IZU0 186 aa21.66■■□□□ 1.06
HLA-DMA-206ENST00000464392 PRAMEF22A3QJZ6 481 aa21.65■■□□□ 1.06
HLA-DMA-206ENST00000464392 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
HLA-DMA-206ENST00000464392 TSPYL4Q9UJ04 414 aa21.65■■□□□ 1.06
HLA-DMA-206ENST00000464392 ZBTB1Q9Y2K1 713 aa21.65■■□□□ 1.06
HLA-DMA-206ENST00000464392 CHL1O00533 1208 aa21.64■■□□□ 1.05
HLA-DMA-206ENST00000464392 RFC4P35249 363 aa21.64■■□□□ 1.05
HLA-DMA-206ENST00000464392 PPP1R1BQ9UD71 204 aaPredicted RBP21.64■■□□□ 1.05
HLA-DMA-206ENST00000464392 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
HLA-DMA-206ENST00000464392 A1BGP04217 495 aa21.63■■□□□ 1.05
HLA-DMA-206ENST00000464392 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
HLA-DMA-206ENST00000464392 POLD1P28340 1107 aa21.63■■□□□ 1.05
HLA-DMA-206ENST00000464392 MSL1Q68DK7 614 aa21.63■■□□□ 1.05
HLA-DMA-206ENST00000464392 GIGYF1O75420 1035 aaPredicted RBP21.62■■□□□ 1.05
HLA-DMA-206ENST00000464392 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
HLA-DMA-206ENST00000464392 SRCAPQ6ZRS2 3230 aa21.62■■□□□ 1.05
HLA-DMA-206ENST00000464392 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
HLA-DMA-206ENST00000464392 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
HLA-DMA-206ENST00000464392 CCER2I3L3R5 266 aa21.61■■□□□ 1.05
HLA-DMA-206ENST00000464392 ARXQ96QS3 562 aa21.61■■□□□ 1.05
HLA-DMA-206ENST00000464392 EIF5P55010 431 aaKnown RBP21.6■■□□□ 1.05
HLA-DMA-206ENST00000464392 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
HLA-DMA-206ENST00000464392 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
HLA-DMA-206ENST00000464392 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
HLA-DMA-206ENST00000464392 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
HLA-DMA-206ENST00000464392 COL24A1Q17RW2 1714 aa21.59■■□□□ 1.05
HLA-DMA-206ENST00000464392 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
HLA-DMA-206ENST00000464392 GYS1P13807 737 aa21.58■■□□□ 1.05
HLA-DMA-206ENST00000464392 IL6STP40189 918 aaPredicted RBP21.58■■□□□ 1.05
HLA-DMA-206ENST00000464392 NLGN1Q8N2Q7 840 aa21.58■■□□□ 1.05
HLA-DMA-206ENST00000464392 SRP68Q9UHB9 627 aaKnown RBP21.58■■□□□ 1.05
HLA-DMA-206ENST00000464392 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
HLA-DMA-206ENST00000464392 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
HLA-DMA-206ENST00000464392 A0A087WZG4 1122 aa21.56■■□□□ 1.04
HLA-DMA-206ENST00000464392 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
HLA-DMA-206ENST00000464392 NARFQ9UHQ1 456 aa21.56■■□□□ 1.04
HLA-DMA-206ENST00000464392 COL15A1P39059 1388 aa21.56■■□□□ 1.04
HLA-DMA-206ENST00000464392 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 ZPR1O75312 459 aa21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 PIP4K2AP48426 406 aaPredicted RBP21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 GNAI1P63096 354 aa21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
HLA-DMA-206ENST00000464392 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 MIER1Q8N108 512 aa21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 FHDC1Q9C0D6 1143 aaPredicted RBP21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 MBIPQ9NS73 344 aa21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 ZNF330Q9Y3S2 320 aaPredicted RBP21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
HLA-DMA-206ENST00000464392 C4AP0C0L4 1744 aa21.53■■□□□ 1.04
HLA-DMA-206ENST00000464392 FKBP8Q14318 412 aa21.53■■□□□ 1.04
HLA-DMA-206ENST00000464392 SYT17Q9BSW7 474 aa21.53■■□□□ 1.04
HLA-DMA-206ENST00000464392 MMP10P09238 476 aa21.52■■□□□ 1.04
HLA-DMA-206ENST00000464392 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
HLA-DMA-206ENST00000464392 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
HLA-DMA-206ENST00000464392 BCL2L12Q9HB09 334 aa21.52■■□□□ 1.04
HLA-DMA-206ENST00000464392 TBC1D2BQ9UPU7 963 aa21.52■■□□□ 1.04
HLA-DMA-206ENST00000464392 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
HLA-DMA-206ENST00000464392 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
HLA-DMA-206ENST00000464392 TM4SF1P30408 202 aa21.49■■□□□ 1.03
HLA-DMA-206ENST00000464392 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
HLA-DMA-206ENST00000464392 IL16Q14005 1332 aa21.49■■□□□ 1.03
HLA-DMA-206ENST00000464392 DZIP3Q86Y13 1208 aaKnown RBP21.48■■□□□ 1.03
HLA-DMA-206ENST00000464392 KLHL34Q8N239 644 aa21.48■■□□□ 1.03
HLA-DMA-206ENST00000464392 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
HLA-DMA-206ENST00000464392 DUSP27Q5VZP5 1158 aa21.47■■□□□ 1.03
HLA-DMA-206ENST00000464392 PARP3Q9Y6F1 533 aa21.47■■□□□ 1.03
HLA-DMA-206ENST00000464392 LAMB4A4D0S4 1761 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 CAMTA2O94983 1202 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 HOXB7P09629 217 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 NFIXQ14938 502 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 PDIA6Q15084 440 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 CD2APQ9Y5K6 639 aa21.46■■□□□ 1.03
HLA-DMA-206ENST00000464392 MYL6BP14649 208 aa21.45■■□□□ 1.02
HLA-DMA-206ENST00000464392 DDR1Q08345 913 aa21.45■■□□□ 1.02
HLA-DMA-206ENST00000464392 NECTIN2Q92692 538 aa21.45■■□□□ 1.02
HLA-DMA-206ENST00000464392 C8orf58Q8NAV2 365 aa21.44■■□□□ 1.02
HLA-DMA-206ENST00000464392 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
HLA-DMA-206ENST00000464392 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
HLA-DMA-206ENST00000464392 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
HLA-DMA-206ENST00000464392 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
HLA-DMA-206ENST00000464392 PROSER3Q2NL68 480 aa21.42■■□□□ 1.02
HLA-DMA-206ENST00000464392 HDGFL1Q5TGJ6 251 aa21.42■■□□□ 1.02
HLA-DMA-206ENST00000464392 TBC1D9BQ66K14 1250 aa21.42■■□□□ 1.02
HLA-DMA-206ENST00000464392 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
HLA-DMA-206ENST00000464392 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
HLA-DMA-206ENST00000464392 RGL2O15211 777 aa21.41■■□□□ 1.02
HLA-DMA-206ENST00000464392 ANXA1P04083 346 aa21.41■■□□□ 1.02
HLA-DMA-206ENST00000464392 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
HLA-DMA-206ENST00000464392 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
HLA-DMA-206ENST00000464392 DDX21Q9NR30 783 aaKnown RBP eCLIP21.41■■□□□ 1.02
HLA-DMA-206ENST00000464392 ZNF521Q96K83 1311 aa21.4■■□□□ 1.02
HLA-DMA-206ENST00000464392 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
HLA-DMA-206ENST00000464392 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
HLA-DMA-206ENST00000464392 ERVV-1B6SEH8 477 aa21.39■■□□□ 1.01
HLA-DMA-206ENST00000464392 SERPINB2P05120 415 aa21.39■■□□□ 1.01
HLA-DMA-206ENST00000464392 HLFQ16534 295 aa21.39■■□□□ 1.01
HLA-DMA-206ENST00000464392 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms