RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 KCNQ3O43525 872 aa21.23■□□□□ 0.99
SHANK1-205ENST00000461154 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
SHANK1-205ENST00000461154 MIS18AQ9NYP9 233 aa21.23■□□□□ 0.99
SHANK1-205ENST00000461154 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
SHANK1-205ENST00000461154 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
SHANK1-205ENST00000461154 SRCAPQ6ZRS2 3230 aa21.22■□□□□ 0.99
SHANK1-205ENST00000461154 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
SHANK1-205ENST00000461154 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
SHANK1-205ENST00000461154 FHDC1Q9C0D6 1143 aaPredicted RBP21.22■□□□□ 0.99
SHANK1-205ENST00000461154 CCDC87Q9NVE4 849 aa21.22■□□□□ 0.99
SHANK1-205ENST00000461154 STARD3NLO95772 234 aa21.21■□□□□ 0.99
SHANK1-205ENST00000461154 CYP19A1P11511 503 aaPredicted RBP21.21■□□□□ 0.99
SHANK1-205ENST00000461154 RFC4P35249 363 aa21.21■□□□□ 0.99
SHANK1-205ENST00000461154 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
SHANK1-205ENST00000461154 ARHGEF1Q92888 912 aaKnown RBP21.21■□□□□ 0.99
SHANK1-205ENST00000461154 SNRPA1P09661 255 aaKnown RBP21.2■□□□□ 0.98
SHANK1-205ENST00000461154 SYT17Q9BSW7 474 aa21.2■□□□□ 0.98
SHANK1-205ENST00000461154 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
SHANK1-205ENST00000461154 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
SHANK1-205ENST00000461154 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
SHANK1-205ENST00000461154 CHL1O00533 1208 aa21.18■□□□□ 0.98
SHANK1-205ENST00000461154 EIF4A1P60842 406 aaKnown RBP21.18■□□□□ 0.98
SHANK1-205ENST00000461154 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
SHANK1-205ENST00000461154 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
SHANK1-205ENST00000461154 MYH14Q7Z406 1995 aaKnown RBP21.17■□□□□ 0.98
SHANK1-205ENST00000461154 GNAI1P63096 354 aa21.17■□□□□ 0.98
SHANK1-205ENST00000461154 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
SHANK1-205ENST00000461154 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
SHANK1-205ENST00000461154 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
SHANK1-205ENST00000461154 KLHL34Q8N239 644 aa21.16■□□□□ 0.98
SHANK1-205ENST00000461154 SOS1Q07889 1333 aaPredicted RBP21.15■□□□□ 0.98
SHANK1-205ENST00000461154 ZBTB1Q9Y2K1 713 aa21.15■□□□□ 0.98
SHANK1-205ENST00000461154 LAMB4A4D0S4 1761 aa21.15■□□□□ 0.98
SHANK1-205ENST00000461154 GIGYF1O75420 1035 aaPredicted RBP21.14■□□□□ 0.97
SHANK1-205ENST00000461154 SALL2Q9Y467 1007 aaPredicted RBP21.14■□□□□ 0.97
SHANK1-205ENST00000461154 IL16Q14005 1332 aa21.13■□□□□ 0.97
SHANK1-205ENST00000461154 ZNF853P0CG23 659 aa21.13■□□□□ 0.97
SHANK1-205ENST00000461154 GYS1P13807 737 aa21.13■□□□□ 0.97
SHANK1-205ENST00000461154 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
SHANK1-205ENST00000461154 ZPR1O75312 459 aa21.12■□□□□ 0.97
SHANK1-205ENST00000461154 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
SHANK1-205ENST00000461154 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
SHANK1-205ENST00000461154 USP16Q9Y5T5 823 aa21.12■□□□□ 0.97
SHANK1-205ENST00000461154 USP42Q9H9J4 1324 aaKnown RBP21.11■□□□□ 0.97
SHANK1-205ENST00000461154 A0A087WZG4 1122 aa21.11■□□□□ 0.97
SHANK1-205ENST00000461154 PRAMEF22A3QJZ6 481 aa21.11■□□□□ 0.97
SHANK1-205ENST00000461154 MMP10P09238 476 aa21.11■□□□□ 0.97
SHANK1-205ENST00000461154 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
SHANK1-205ENST00000461154 EIF5P55010 431 aaKnown RBP21.1■□□□□ 0.97
SHANK1-205ENST00000461154 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
SHANK1-205ENST00000461154 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
SHANK1-205ENST00000461154 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
SHANK1-205ENST00000461154 COL15A1P39059 1388 aa21.1■□□□□ 0.97
SHANK1-205ENST00000461154 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
SHANK1-205ENST00000461154 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
SHANK1-205ENST00000461154 A1BGP04217 495 aa21.08■□□□□ 0.97
SHANK1-205ENST00000461154 PARP3Q9Y6F1 533 aa21.08■□□□□ 0.97
SHANK1-205ENST00000461154 HOXB7P09629 217 aa21.07■□□□□ 0.96
SHANK1-205ENST00000461154 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
SHANK1-205ENST00000461154 FKBP8Q14318 412 aa21.06■□□□□ 0.96
SHANK1-205ENST00000461154 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
SHANK1-205ENST00000461154 ERBB4Q15303 1308 aa21.05■□□□□ 0.96
SHANK1-205ENST00000461154 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
SHANK1-205ENST00000461154 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
SHANK1-205ENST00000461154 KRT24Q2M2I5 525 aa21.03■□□□□ 0.96
SHANK1-205ENST00000461154 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
SHANK1-205ENST00000461154 TSR2Q969E8 191 aaKnown RBP21.03■□□□□ 0.96
SHANK1-205ENST00000461154 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
SHANK1-205ENST00000461154 MYH16Q9H6N6 1097 aa21.03■□□□□ 0.96
SHANK1-205ENST00000461154 ZNF521Q96K83 1311 aa21.03■□□□□ 0.96
SHANK1-205ENST00000461154 TM4SF1P30408 202 aa21.02■□□□□ 0.96
SHANK1-205ENST00000461154 GPR162Q16538 588 aa21.02■□□□□ 0.96
SHANK1-205ENST00000461154 NBPF26B4DH59 902 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
SHANK1-205ENST00000461154 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 HDGFL1Q5TGJ6 251 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 NBPF10Q6P3W6 841 aaKnown RBP21.01■□□□□ 0.95
SHANK1-205ENST00000461154 NBPF15Q8N660 670 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 BCL2L12Q9HB09 334 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 FANCIQ9NVI1 1328 aa21.01■□□□□ 0.95
SHANK1-205ENST00000461154 DDR1Q08345 913 aa20.99■□□□□ 0.95
SHANK1-205ENST00000461154 NFIXQ14938 502 aa20.99■□□□□ 0.95
SHANK1-205ENST00000461154 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
SHANK1-205ENST00000461154 C8orf58Q8NAV2 365 aa20.99■□□□□ 0.95
SHANK1-205ENST00000461154 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
SHANK1-205ENST00000461154 POLRMTO00411 1230 aaKnown RBP20.98■□□□□ 0.95
SHANK1-205ENST00000461154 MYL6BP14649 208 aa20.98■□□□□ 0.95
SHANK1-205ENST00000461154 TGFB2P61812 414 aa20.98■□□□□ 0.95
SHANK1-205ENST00000461154 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
SHANK1-205ENST00000461154 NECTIN2Q92692 538 aa20.98■□□□□ 0.95
SHANK1-205ENST00000461154 ELL2O00472 640 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-205ENST00000461154 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHANK1-205ENST00000461154 DBF4Q9UBU7 674 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-205ENST00000461154 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
SHANK1-205ENST00000461154 E9PSI1 815 aa20.96■□□□□ 0.95
SHANK1-205ENST00000461154 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
SHANK1-205ENST00000461154 SPINK5Q9NQ38 1064 aaPredicted RBP20.96■□□□□ 0.95
SHANK1-205ENST00000461154 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.95
SHANK1-205ENST00000461154 RGL2O15211 777 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms