RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-211ENST00000461043 WWC1Q8IX03 1113 aa15.87■□□□□ 0.13
ERGIC3-211ENST00000461043 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
ERGIC3-211ENST00000461043 CFAP44Q96MT7 982 aa15.87■□□□□ 0.13
ERGIC3-211ENST00000461043 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 ADRA2BP18089 450 aa15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 ZBTB1Q9Y2K1 713 aa15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
ERGIC3-211ENST00000461043 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 ZBTB7AO95365 584 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
ERGIC3-211ENST00000461043 PHF14O94880 888 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 PTGER2P43116 358 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 MBIPQ9NS73 344 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 C4AP0C0L4 1744 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 IL16Q14005 1332 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 ZNF521Q96K83 1311 aa15.84■□□□□ 0.13
ERGIC3-211ENST00000461043 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
ERGIC3-211ENST00000461043 GNAI1P63096 354 aa15.83■□□□□ 0.12
ERGIC3-211ENST00000461043 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
ERGIC3-211ENST00000461043 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
ERGIC3-211ENST00000461043 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
ERGIC3-211ENST00000461043 A1BGP04217 495 aa15.82■□□□□ 0.12
ERGIC3-211ENST00000461043 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
ERGIC3-211ENST00000461043 COL15A1P39059 1388 aa15.82■□□□□ 0.12
ERGIC3-211ENST00000461043 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
ERGIC3-211ENST00000461043 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
ERGIC3-211ENST00000461043 WDR63Q8IWG1 891 aa15.81■□□□□ 0.12
ERGIC3-211ENST00000461043 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
ERGIC3-211ENST00000461043 USP42Q9H9J4 1324 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 NBPF26B4DH59 902 aa15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 MSH5O43196 834 aa15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 NBPF10Q6P3W6 841 aaKnown RBP15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 NBPF15Q8N660 670 aa15.8■□□□□ 0.12
ERGIC3-211ENST00000461043 HOXB7P09629 217 aa15.79■□□□□ 0.12
ERGIC3-211ENST00000461043 GYS1P13807 737 aa15.79■□□□□ 0.12
ERGIC3-211ENST00000461043 SALL2Q9Y467 1007 aaPredicted RBP15.79■□□□□ 0.12
ERGIC3-211ENST00000461043 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
ERGIC3-211ENST00000461043 RFC4P35249 363 aa15.78■□□□□ 0.12
ERGIC3-211ENST00000461043 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
ERGIC3-211ENST00000461043 PIP4K2AP48426 406 aaPredicted RBP15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 PDIA6Q15084 440 aa15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 MSL1Q68DK7 614 aa15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 SRP68Q9UHB9 627 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-211ENST00000461043 UTRNP46939 3433 aa15.77■□□□□ 0.11
ERGIC3-211ENST00000461043 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
ERGIC3-211ENST00000461043 A0A087WZG4 1122 aa15.76■□□□□ 0.11
ERGIC3-211ENST00000461043 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
ERGIC3-211ENST00000461043 DUSP27Q5VZP5 1158 aa15.75■□□□□ 0.11
ERGIC3-211ENST00000461043 C8orf58Q8NAV2 365 aa15.75■□□□□ 0.11
ERGIC3-211ENST00000461043 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
ERGIC3-211ENST00000461043 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
ERGIC3-211ENST00000461043 FKBP8Q14318 412 aa15.74■□□□□ 0.11
ERGIC3-211ENST00000461043 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
ERGIC3-211ENST00000461043 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
ERGIC3-211ENST00000461043 BCORQ6W2J9 1755 aa15.74■□□□□ 0.11
ERGIC3-211ENST00000461043 ZPR1O75312 459 aa15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 POLD1P28340 1107 aa15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 PROSER3Q2NL68 480 aa15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 ARXQ96QS3 562 aa15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
ERGIC3-211ENST00000461043 RGL2O15211 777 aa15.72■□□□□ 0.11
ERGIC3-211ENST00000461043 TM4SF1P30408 202 aa15.72■□□□□ 0.11
ERGIC3-211ENST00000461043 HDGFL1Q5TGJ6 251 aa15.72■□□□□ 0.11
ERGIC3-211ENST00000461043 TSPYL6Q8N831 410 aa15.72■□□□□ 0.11
ERGIC3-211ENST00000461043 MMP10P09238 476 aa15.71■□□□□ 0.11
ERGIC3-211ENST00000461043 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
ERGIC3-211ENST00000461043 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
ERGIC3-211ENST00000461043 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
ERGIC3-211ENST00000461043 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
ERGIC3-211ENST00000461043 MYL6BP14649 208 aa15.7■□□□□ 0.1
ERGIC3-211ENST00000461043 DDR1Q08345 913 aa15.7■□□□□ 0.1
ERGIC3-211ENST00000461043 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
ERGIC3-211ENST00000461043 CHPF2Q9P2E5 772 aa15.7■□□□□ 0.1
ERGIC3-211ENST00000461043 E9PSI1 815 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 ANXA1P04083 346 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 NFIXQ14938 502 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 CLEC4GQ6UXB4 293 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 TTLL7Q6ZT98 887 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 TRMT2AQ8IZ69 625 aaKnown RBP15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
ERGIC3-211ENST00000461043 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 POLRMTO00411 1230 aaKnown RBP15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms