RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PHKA2P46019 1235 aa7.91□□□□□ -1.14
ATPAF1-203ENST00000460928 GPAT2Q6NUI2 795 aa7.91□□□□□ -1.14
ATPAF1-203ENST00000460928 GPAMQ9HCL2 828 aa7.91□□□□□ -1.14
ATPAF1-203ENST00000460928 LMTK3Q96Q04 1460 aa7.91□□□□□ -1.14
ATPAF1-203ENST00000460928 TDRD9Q8NDG6 1382 aaKnown RBP7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 OIP5O43482 229 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 SCNN1DP51172 638 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 FLIIQ13045 1269 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 MCM6Q14566 821 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 TLR1Q15399 786 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 OXLD1Q5BKU9 147 aa7.9□□□□□ -1.14
ATPAF1-203ENST00000460928 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 SOGA1O94964 1423 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 ABL2P42684 1182 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 PGBD3Q8N328 593 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 OXCT2Q9BYC2 517 aaPredicted RBP7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 CRISPLD1Q9H336 500 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
ATPAF1-203ENST00000460928 STAU1O95793 577 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 INHAP05111 366 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 MSX1P28360 303 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 EFHC2Q5JST6 749 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 BIVM-ERCC5R4GMW8 1640 aa7.88□□□□□ -1.15
ATPAF1-203ENST00000460928 CNTNAP5Q8WYK1 1306 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 GDF10P55107 478 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 SEMA3FQ13275 785 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 C1orf216Q8TAB5 229 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 RUBCNLQ9H714 662 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 NDFIP2Q9NV92 336 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 GDF2Q9UK05 429 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 IFT140Q96RY7 1462 aa7.87□□□□□ -1.15
ATPAF1-203ENST00000460928 ERCC6L2Q5T890 1561 aa7.86□□□□□ -1.15
ATPAF1-203ENST00000460928 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
ATPAF1-203ENST00000460928 UBTFP17480 764 aaKnown RBP7.85□□□□□ -1.15
ATPAF1-203ENST00000460928 TBC1D9Q6ZT07 1266 aa7.85□□□□□ -1.15
ATPAF1-203ENST00000460928 DCAF5Q96JK2 942 aa7.85□□□□□ -1.15
ATPAF1-203ENST00000460928 SLC4A9Q96Q91 983 aa7.85□□□□□ -1.15
ATPAF1-203ENST00000460928 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 TTBK1Q5TCY1 1321 aaPredicted RBP7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 RUSC2Q8N2Y8 1516 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 CHD1O14646 1710 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 PLA2G4AP47712 749 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 SMTNP53814 917 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 MTFR1Q15390 333 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 ZNF295-AS1Q8N0V1 137 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 GOLGA6L1Q8N7Z2 621 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 COG6Q9Y2V7 657 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
ATPAF1-203ENST00000460928 TMEM229AB2RXF0 380 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 BNIP3LO60238 219 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 ATP4AP20648 1035 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 FGFR3P22607 806 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 NLRP8Q86W28 1048 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 FBXO41Q8TF61 875 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 ABHD17AQ96GS6 310 aa7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
ATPAF1-203ENST00000460928 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 SLCO4C1Q6ZQN7 724 aa7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 NFATC2IPQ8NCF5 419 aa7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 ARID3AQ99856 593 aa7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 IQSEC3Q9UPP2 1182 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-203ENST00000460928 CDK2AP1O14519 115 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 C2CD2LO14523 706 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 BMP4P12644 408 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 PLA2G4EQ3MJ16 856 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 FAM9AQ8IZU1 332 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 EDARADDQ8WWZ3 215 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 ALG2Q9H553 416 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 C1orf115Q9H7X2 142 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 PCDHGC4Q9Y5F7 938 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 PCDHGA11Q9Y5H2 935 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 ABCA10Q8WWZ4 1543 aa7.81□□□□□ -1.16
ATPAF1-203ENST00000460928 A6NJY4 79 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 PIK3CDO00329 1044 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 ALYREFQ86V81 257 aaKnown RBP7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 ZCCHC2Q9C0B9 1178 aaKnown RBP7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 ZDHHC3Q9NYG2 299 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 MKL2Q9ULH7 1088 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
ATPAF1-203ENST00000460928 ARID3CA6NKF2 412 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 MSTNO14793 375 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 ITGB2P05107 769 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 ARAFP10398 606 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 SNRPNP63162 240 aaKnown RBP7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 CTBSQ01459 385 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 EML3Q32P44 896 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 FAM182BQ5T319 152 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms