RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.67	■■■□□ 2.98
SEMA3C-205	ENST00000458729	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.66	■■■□□ 2.98
SEMA3C-205	ENST00000458729	COL23A1	Q86Y22	540 aa	Predicted RBP	33.66	■■■□□ 2.98
SEMA3C-205	ENST00000458729	UBR3	Q6ZT12	1888 aa		33.66	■■■□□ 2.98
SEMA3C-205	ENST00000458729	CASZ1	Q86V15	1759 aa		33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	MYH14	Q7Z406	1995 aa	Known RBP	33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	MSH5	O43196	834 aa		33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	GIGYF1	O75420	1035 aa	Predicted RBP	33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	PHF14	O94880	888 aa		33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	ADRA2B	P18089	450 aa		33.65	■■■□□ 2.98
SEMA3C-205	ENST00000458729	TRAPPC3L	Q5T215	181 aa		33.64	■■■□□ 2.98
SEMA3C-205	ENST00000458729	WDR63	Q8IWG1	891 aa		33.64	■■■□□ 2.98
SEMA3C-205	ENST00000458729	USP16	Q9Y5T5	823 aa		33.64	■■■□□ 2.98
SEMA3C-205	ENST00000458729	IL16	Q14005	1332 aa		33.64	■■■□□ 2.98
SEMA3C-205	ENST00000458729	AMIGO3	Q86WK7	504 aa		33.63	■■■□□ 2.97
SEMA3C-205	ENST00000458729	PRAMEF22	A3QJZ6	481 aa		33.62	■■■□□ 2.97
SEMA3C-205	ENST00000458729	MBIP	Q9NS73	344 aa		33.62	■■■□□ 2.97
SEMA3C-205	ENST00000458729	ZBTB1	Q9Y2K1	713 aa		33.61	■■■□□ 2.97
SEMA3C-205	ENST00000458729	MTFR1L	Q9H019	292 aa		33.6	■■■□□ 2.97
SEMA3C-205	ENST00000458729	ZBTB7A	O95365	584 aa		33.59	■■■□□ 2.97
SEMA3C-205	ENST00000458729	SMIM5	Q71RC9	77 aa		33.59	■■■□□ 2.97
SEMA3C-205	ENST00000458729	SPON1	Q9HCB6	807 aa		33.59	■■■□□ 2.97
SEMA3C-205	ENST00000458729	SOS1	Q07889	1333 aa	Predicted RBP	33.58	■■■□□ 2.97
SEMA3C-205	ENST00000458729	CANX	P27824	592 aa	Known RBP	33.58	■■■□□ 2.97
SEMA3C-205	ENST00000458729	ARHGEF1	Q92888	912 aa	Known RBP	33.58	■■■□□ 2.97
SEMA3C-205	ENST00000458729	A1BG	P04217	495 aa		33.57	■■■□□ 2.97
SEMA3C-205	ENST00000458729	RFC4	P35249	363 aa		33.55	■■■□□ 2.96
SEMA3C-205	ENST00000458729	IL6ST	P40189	918 aa	Predicted RBP	33.54	■■■□□ 2.96
SEMA3C-205	ENST00000458729	EIF5	P55010	431 aa	Known RBP	33.53	■■■□□ 2.96
SEMA3C-205	ENST00000458729	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.53	■■■□□ 2.96
SEMA3C-205	ENST00000458729	HOXB7	P09629	217 aa		33.53	■■■□□ 2.96
SEMA3C-205	ENST00000458729	NPM2	Q86SE8	214 aa	Known RBP	33.53	■■■□□ 2.96
SEMA3C-205	ENST00000458729	LAMB4	A4D0S4	1761 aa		33.52	■■■□□ 2.96
SEMA3C-205	ENST00000458729	ZNF521	Q96K83	1311 aa		33.52	■■■□□ 2.96
SEMA3C-205	ENST00000458729		A0A087WZG4	1122 aa		33.52	■■■□□ 2.96
SEMA3C-205	ENST00000458729	COL15A1	P39059	1388 aa		33.51	■■■□□ 2.96
SEMA3C-205	ENST00000458729	KRT24	Q2M2I5	525 aa		33.5	■■■□□ 2.95
SEMA3C-205	ENST00000458729	ERBB4	Q15303	1308 aa		33.49	■■■□□ 2.95
SEMA3C-205	ENST00000458729	TSR2	Q969E8	191 aa	Known RBP	33.49	■■■□□ 2.95
SEMA3C-205	ENST00000458729	EIF2S2	P20042	333 aa	Known RBP	33.48	■■■□□ 2.95
SEMA3C-205	ENST00000458729	DUSP27	Q5VZP5	1158 aa		33.48	■■■□□ 2.95
SEMA3C-205	ENST00000458729	LRP5	O75197	1615 aa		33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	NBPF26	B4DH59	902 aa		33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	ZPR1	O75312	459 aa		33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	NBPF10	Q6P3W6	841 aa	Known RBP	33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	NBPF15	Q8N660	670 aa		33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	MYH16	Q9H6N6	1097 aa		33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.47	■■■□□ 2.95
SEMA3C-205	ENST00000458729	USP42	Q9H9J4	1324 aa	Known RBP	33.46	■■■□□ 2.95
SEMA3C-205	ENST00000458729	NARF	Q9UHQ1	456 aa		33.46	■■■□□ 2.95
SEMA3C-205	ENST00000458729	POLD1	P28340	1107 aa		33.45	■■■□□ 2.95
SEMA3C-205	ENST00000458729	PTGER2	P43116	358 aa		33.45	■■■□□ 2.95
SEMA3C-205	ENST00000458729	PIP4K2A	P48426	406 aa	Predicted RBP	33.45	■■■□□ 2.95
SEMA3C-205	ENST00000458729	NLGN1	Q8N2Q7	840 aa		33.45	■■■□□ 2.95
SEMA3C-205	ENST00000458729	GOLGA2	Q08379	1002 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	MSL1	Q68DK7	614 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	SGIP1	Q9BQI5	828 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	CHMP4A	Q9BY43	222 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	FANCI	Q9NVI1	1328 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	C4A	P0C0L4	1744 aa		33.44	■■■□□ 2.94
SEMA3C-205	ENST00000458729	GYS1	P13807	737 aa		33.43	■■■□□ 2.94
SEMA3C-205	ENST00000458729	SRP68	Q9UHB9	627 aa	Known RBP	33.43	■■■□□ 2.94
SEMA3C-205	ENST00000458729	HDGFL1	Q5TGJ6	251 aa		33.42	■■■□□ 2.94
SEMA3C-205	ENST00000458729	C8orf58	Q8NAV2	365 aa		33.42	■■■□□ 2.94
SEMA3C-205	ENST00000458729	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.42	■■■□□ 2.94
SEMA3C-205	ENST00000458729	COL24A1	Q17RW2	1714 aa		33.41	■■■□□ 2.94
SEMA3C-205	ENST00000458729	ELL2	O00472	640 aa	Predicted RBP	33.4	■■■□□ 2.94
SEMA3C-205	ENST00000458729	USPL1	Q5W0Q7	1092 aa		33.4	■■■□□ 2.94
SEMA3C-205	ENST00000458729	ARX	Q96QS3	562 aa		33.4	■■■□□ 2.94
SEMA3C-205	ENST00000458729	DZIP3	Q86Y13	1208 aa	Known RBP	33.39	■■■□□ 2.94
SEMA3C-205	ENST00000458729	TBC1D2B	Q9UPU7	963 aa		33.39	■■■□□ 2.94
SEMA3C-205	ENST00000458729		E9PSI1	815 aa		33.38	■■■□□ 2.93
SEMA3C-205	ENST00000458729	MYL6B	P14649	208 aa		33.38	■■■□□ 2.93
SEMA3C-205	ENST00000458729	PDIA6	Q15084	440 aa		33.38	■■■□□ 2.93
SEMA3C-205	ENST00000458729	NECTIN2	Q92692	538 aa		33.38	■■■□□ 2.93
SEMA3C-205	ENST00000458729	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.38	■■■□□ 2.93
SEMA3C-205	ENST00000458729	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.37	■■■□□ 2.93
SEMA3C-205	ENST00000458729	TSPYL6	Q8N831	410 aa		33.36	■■■□□ 2.93
SEMA3C-205	ENST00000458729	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
SEMA3C-205	ENST00000458729	TWISTNB	Q3B726	338 aa	Predicted RBP	33.35	■■■□□ 2.93
SEMA3C-205	ENST00000458729	DBF4	Q9UBU7	674 aa	Predicted RBP	33.35	■■■□□ 2.93
SEMA3C-205	ENST00000458729	FKBP8	Q14318	412 aa		33.34	■■■□□ 2.93
SEMA3C-205	ENST00000458729	CAMTA2	O94983	1202 aa		33.33	■■■□□ 2.93
SEMA3C-205	ENST00000458729	SLFN5	Q08AF3	891 aa		33.33	■■■□□ 2.93
SEMA3C-205	ENST00000458729	CHPF2	Q9P2E5	772 aa		33.33	■■■□□ 2.93
SEMA3C-205	ENST00000458729	RGL2	O15211	777 aa		33.32	■■■□□ 2.93
SEMA3C-205	ENST00000458729	EXOSC9	Q06265	439 aa	Known RBP	33.32	■■■□□ 2.93
SEMA3C-205	ENST00000458729	CCDC30	Q5VVM6	783 aa		33.32	■■■□□ 2.93
SEMA3C-205	ENST00000458729	BCL2L12	Q9HB09	334 aa		33.32	■■■□□ 2.93
SEMA3C-205	ENST00000458729	MMP10	P09238	476 aa		33.31	■■■□□ 2.92
SEMA3C-205	ENST00000458729	PROSER3	Q2NL68	480 aa		33.31	■■■□□ 2.92
SEMA3C-205	ENST00000458729	LRP10	Q7Z4F1	713 aa		33.31	■■■□□ 2.92
SEMA3C-205	ENST00000458729	CLEC4G	Q6UXB4	293 aa		33.3	■■■□□ 2.92
SEMA3C-205	ENST00000458729	KIF6	Q6ZMV9	814 aa		33.3	■■■□□ 2.92
SEMA3C-205	ENST00000458729	ANXA1	P04083	346 aa		33.29	■■■□□ 2.92
SEMA3C-205	ENST00000458729	HYPK	Q9NX55	129 aa		33.29	■■■□□ 2.92
SEMA3C-205	ENST00000458729	ZNF652	Q9Y2D9	606 aa		33.29	■■■□□ 2.92
SEMA3C-205	ENST00000458729	ERVV-1	B6SEH8	477 aa		33.28	■■■□□ 2.92
SEMA3C-205	ENST00000458729	TM4SF1	P30408	202 aa		33.28	■■■□□ 2.92
SEMA3C-205	ENST00000458729	CDCA7L	Q96GN5	454 aa		33.28	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms