RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 TIMMDC1Q9NPL8 285 aa7.23□□□□□ -1.25
HMGB4-202ENST00000458277 NOP53Q9NZM5 478 aaKnown RBP7.23□□□□□ -1.25
HMGB4-202ENST00000458277 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
HMGB4-202ENST00000458277 WIZO95785 1651 aa7.22□□□□□ -1.25
HMGB4-202ENST00000458277 TCERG1O14776 1098 aaKnown RBP7.22□□□□□ -1.25
HMGB4-202ENST00000458277 F11P03951 625 aa7.22□□□□□ -1.25
HMGB4-202ENST00000458277 GTF2E1P29083 439 aaPredicted RBP7.22□□□□□ -1.25
HMGB4-202ENST00000458277 CTDSPL2Q05D32 466 aa7.22□□□□□ -1.25
HMGB4-202ENST00000458277 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
HMGB4-202ENST00000458277 A0A1W2PRU2 124 aa7.21□□□□□ -1.26
HMGB4-202ENST00000458277 RSPO4Q2I0M5 234 aaPredicted RBP7.21□□□□□ -1.26
HMGB4-202ENST00000458277 MYSM1Q5VVJ2 828 aa7.21□□□□□ -1.26
HMGB4-202ENST00000458277 DZIP3Q86Y13 1208 aaKnown RBP7.21□□□□□ -1.26
HMGB4-202ENST00000458277 GPAMQ9HCL2 828 aa7.21□□□□□ -1.26
HMGB4-202ENST00000458277 GGA1Q9UJY5 639 aa7.21□□□□□ -1.26
HMGB4-202ENST00000458277 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
HMGB4-202ENST00000458277 BAZ1BQ9UIG0 1483 aaKnown RBP7.2□□□□□ -1.26
HMGB4-202ENST00000458277 THBS1P07996 1170 aa7.2□□□□□ -1.26
HMGB4-202ENST00000458277 PARP9Q8IXQ6 854 aa7.2□□□□□ -1.26
HMGB4-202ENST00000458277 LRRN4Q8WUT4 740 aa7.2□□□□□ -1.26
HMGB4-202ENST00000458277 FRAT1Q92837 279 aaPredicted RBP7.2□□□□□ -1.26
HMGB4-202ENST00000458277 BTBD6Q96KE9 485 aa7.2□□□□□ -1.26
HMGB4-202ENST00000458277 NLRP3Q96P20 1036 aa7.2□□□□□ -1.26
HMGB4-202ENST00000458277 GTPBP4Q9BZE4 634 aaKnown RBP7.2□□□□□ -1.26
HMGB4-202ENST00000458277 LETM1O95202 739 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-202ENST00000458277 BMP4P12644 408 aa7.19□□□□□ -1.26
HMGB4-202ENST00000458277 DGKGP49619 791 aa7.19□□□□□ -1.26
HMGB4-202ENST00000458277 NR6A1Q15406 480 aa7.19□□□□□ -1.26
HMGB4-202ENST00000458277 SLCO4C1Q6ZQN7 724 aa7.19□□□□□ -1.26
HMGB4-202ENST00000458277 C2CD2LO14523 706 aa7.18□□□□□ -1.26
HMGB4-202ENST00000458277 RGS3P49796 1198 aa7.18□□□□□ -1.26
HMGB4-202ENST00000458277 TUSC1Q2TAM9 212 aa7.18□□□□□ -1.26
HMGB4-202ENST00000458277 ZNF622Q969S3 477 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB4-202ENST00000458277 GRIP2Q9C0E4 1043 aa7.18□□□□□ -1.26
HMGB4-202ENST00000458277 CHMP4BQ9H444 224 aaKnown RBP7.18□□□□□ -1.26
HMGB4-202ENST00000458277 ZC3H4Q9UPT8 1303 aaKnown RBP7.18□□□□□ -1.26
HMGB4-202ENST00000458277 EPXP11678 715 aa7.17□□□□□ -1.26
HMGB4-202ENST00000458277 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
HMGB4-202ENST00000458277 NFKBIBQ15653 356 aa7.17□□□□□ -1.26
HMGB4-202ENST00000458277 NKAPLQ5M9Q1 402 aa7.17□□□□□ -1.26
HMGB4-202ENST00000458277 TAS1R3Q7RTX0 852 aa7.17□□□□□ -1.26
HMGB4-202ENST00000458277 DHX37Q8IY37 1157 aaKnown RBP7.17□□□□□ -1.26
HMGB4-202ENST00000458277 ESPNB1AK53 854 aa7.16□□□□□ -1.26
HMGB4-202ENST00000458277 WASLO00401 505 aaPredicted RBP7.16□□□□□ -1.26
HMGB4-202ENST00000458277 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
HMGB4-202ENST00000458277 GPSM3Q9Y4H4 160 aa7.16□□□□□ -1.26
HMGB4-202ENST00000458277 SPATA31C2B4DYI2 1134 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 DYRK3O43781 588 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 DMTNQ08495 405 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 BARGINQ6ZT62 677 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 TSPYL1Q9H0U9 437 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
HMGB4-202ENST00000458277 NEURL1BA8MQ27 555 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 CLSTN1O94985 981 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 MCCP23508 829 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 PHKA2P46019 1235 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 HAP1P54257 671 aaPredicted RBP7.14□□□□□ -1.27
HMGB4-202ENST00000458277 CTBSQ01459 385 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 WDR44Q5JSH3 913 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
HMGB4-202ENST00000458277 RNF135Q8IUD6 432 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 ABHD17AQ96GS6 310 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
HMGB4-202ENST00000458277 CCDC88BA6NC98 1476 aa7.13□□□□□ -1.27
HMGB4-202ENST00000458277 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
HMGB4-202ENST00000458277 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
HMGB4-202ENST00000458277 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
HMGB4-202ENST00000458277 DNAJC2Q99543 621 aaKnown RBP7.13□□□□□ -1.27
HMGB4-202ENST00000458277 RRAGDQ9NQL2 400 aaPredicted RBP7.13□□□□□ -1.27
HMGB4-202ENST00000458277 ATXN7L1Q9ULK2 861 aaPredicted RBP7.13□□□□□ -1.27
HMGB4-202ENST00000458277 FGFR3P22607 806 aa7.12□□□□□ -1.27
HMGB4-202ENST00000458277 CLK2P49760 499 aaKnown RBP7.12□□□□□ -1.27
HMGB4-202ENST00000458277 MMP14P50281 582 aa7.12□□□□□ -1.27
HMGB4-202ENST00000458277 UBAP2LQ14157 1087 aaKnown RBP7.12□□□□□ -1.27
HMGB4-202ENST00000458277 CEP120Q8N960 986 aa7.12□□□□□ -1.27
HMGB4-202ENST00000458277 PLVAPQ9BX97 442 aa7.12□□□□□ -1.27
HMGB4-202ENST00000458277 RUBCNLQ9H714 662 aa7.12□□□□□ -1.27
HMGB4-202ENST00000458277 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
HMGB4-202ENST00000458277 CLN3Q13286 438 aa7.11□□□□□ -1.27
HMGB4-202ENST00000458277 DNTTIP2Q5QJE6 756 aaKnown RBP7.11□□□□□ -1.27
HMGB4-202ENST00000458277 CHSY3Q70JA7 882 aa7.11□□□□□ -1.27
HMGB4-202ENST00000458277 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
HMGB4-202ENST00000458277 SECISBP2LQ93073 1101 aaKnown RBP7.11□□□□□ -1.27
HMGB4-202ENST00000458277 YY1AP1Q9H869 796 aa7.11□□□□□ -1.27
HMGB4-202ENST00000458277 COBLO75128 1261 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 SPATA31C1P0DKV0 1188 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 CSB-PGBD3P0DP91 1061 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 MRE11P49959 708 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 PGBD3Q8N328 593 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
HMGB4-202ENST00000458277 DYNC1I1O14576 645 aa7.09□□□□□ -1.27
HMGB4-202ENST00000458277 ZMYND10O75800 440 aa7.09□□□□□ -1.27
HMGB4-202ENST00000458277 APPP05067 770 aa7.09□□□□□ -1.27
HMGB4-202ENST00000458277 SETQ01105 290 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-202ENST00000458277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.09□□□□□ -1.27
HMGB4-202ENST00000458277 RGS22Q8NE09 1264 aa7.09□□□□□ -1.27
HMGB4-202ENST00000458277 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms