RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 COL5A3P25940 1745 aaPredicted RBP23.68■■□□□ 1.38
TRIM13-206ENST00000457662 MBIPQ9NS73 344 aa23.67■■□□□ 1.38
TRIM13-206ENST00000457662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.66■■□□□ 1.38
TRIM13-206ENST00000457662 COL23A1Q86Y22 540 aaPredicted RBP23.66■■□□□ 1.38
TRIM13-206ENST00000457662 SLC16A10Q8TF71 515 aa23.66■■□□□ 1.38
TRIM13-206ENST00000457662 MYH14Q7Z406 1995 aaKnown RBP23.66■■□□□ 1.38
TRIM13-206ENST00000457662 PRAMEF22A3QJZ6 481 aa23.65■■□□□ 1.38
TRIM13-206ENST00000457662 ADRA2BP18089 450 aa23.65■■□□□ 1.38
TRIM13-206ENST00000457662 TRAPPC3LQ5T215 181 aa23.65■■□□□ 1.38
TRIM13-206ENST00000457662 PDGFDQ9GZP0 370 aaPredicted RBP23.65■■□□□ 1.38
TRIM13-206ENST00000457662 QSER1Q2KHR3 1735 aa23.65■■□□□ 1.38
TRIM13-206ENST00000457662 MSH5O43196 834 aa23.64■■□□□ 1.38
TRIM13-206ENST00000457662 PHF14O94880 888 aa23.64■■□□□ 1.38
TRIM13-206ENST00000457662 AMIGO3Q86WK7 504 aa23.64■■□□□ 1.38
TRIM13-206ENST00000457662 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
TRIM13-206ENST00000457662 UBR3Q6ZT12 1888 aa23.63■■□□□ 1.37
TRIM13-206ENST00000457662 A1BGP04217 495 aa23.62■■□□□ 1.37
TRIM13-206ENST00000457662 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
TRIM13-206ENST00000457662 SMIM5Q71RC9 77 aa23.62■■□□□ 1.37
TRIM13-206ENST00000457662 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
TRIM13-206ENST00000457662 TUBGCP6Q96RT7 1819 aa23.61■■□□□ 1.37
TRIM13-206ENST00000457662 ARHGEF1Q92888 912 aaKnown RBP23.61■■□□□ 1.37
TRIM13-206ENST00000457662 SOS1Q07889 1333 aaPredicted RBP23.61■■□□□ 1.37
TRIM13-206ENST00000457662 HOXB7P09629 217 aa23.6■■□□□ 1.37
TRIM13-206ENST00000457662 RFC4P35249 363 aa23.6■■□□□ 1.37
TRIM13-206ENST00000457662 IL6STP40189 918 aaPredicted RBP23.6■■□□□ 1.37
TRIM13-206ENST00000457662 MTFR1LQ9H019 292 aa23.6■■□□□ 1.37
TRIM13-206ENST00000457662 CASZ1Q86V15 1759 aa23.59■■□□□ 1.37
TRIM13-206ENST00000457662 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
TRIM13-206ENST00000457662 NPM2Q86SE8 214 aaKnown RBP23.59■■□□□ 1.37
TRIM13-206ENST00000457662 EIF5P55010 431 aaKnown RBP23.58■■□□□ 1.37
TRIM13-206ENST00000457662 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
TRIM13-206ENST00000457662 TSR2Q969E8 191 aaKnown RBP23.58■■□□□ 1.37
TRIM13-206ENST00000457662 SPON1Q9HCB6 807 aa23.58■■□□□ 1.37
TRIM13-206ENST00000457662 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
TRIM13-206ENST00000457662 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
TRIM13-206ENST00000457662 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
TRIM13-206ENST00000457662 A0A087WZG4 1122 aa23.56■■□□□ 1.36
TRIM13-206ENST00000457662 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
TRIM13-206ENST00000457662 ERBB4Q15303 1308 aa23.56■■□□□ 1.36
TRIM13-206ENST00000457662 CHMP4AQ9BY43 222 aa23.56■■□□□ 1.36
TRIM13-206ENST00000457662 ATF5Q9Y2D1 282 aaPredicted RBP23.56■■□□□ 1.36
TRIM13-206ENST00000457662 NBPF26B4DH59 902 aa23.55■■□□□ 1.36
TRIM13-206ENST00000457662 NBPF10Q6P3W6 841 aaKnown RBP23.55■■□□□ 1.36
TRIM13-206ENST00000457662 NBPF15Q8N660 670 aa23.55■■□□□ 1.36
TRIM13-206ENST00000457662 C8orf58Q8NAV2 365 aa23.55■■□□□ 1.36
TRIM13-206ENST00000457662 SPINK5Q9NQ38 1064 aaPredicted RBP23.55■■□□□ 1.36
TRIM13-206ENST00000457662 COL15A1P39059 1388 aa23.54■■□□□ 1.36
TRIM13-206ENST00000457662 FANCIQ9NVI1 1328 aa23.54■■□□□ 1.36
TRIM13-206ENST00000457662 LAMB4A4D0S4 1761 aa23.54■■□□□ 1.36
TRIM13-206ENST00000457662 ZPR1O75312 459 aa23.54■■□□□ 1.36
TRIM13-206ENST00000457662 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
TRIM13-206ENST00000457662 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
TRIM13-206ENST00000457662 PIP4K2AP48426 406 aaPredicted RBP23.53■■□□□ 1.36
TRIM13-206ENST00000457662 HNRNPUQ00839 825 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRIM13-206ENST00000457662 NARFQ9UHQ1 456 aa23.53■■□□□ 1.36
TRIM13-206ENST00000457662 E9PSI1 815 aa23.52■■□□□ 1.36
TRIM13-206ENST00000457662 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.36
TRIM13-206ENST00000457662 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.36
TRIM13-206ENST00000457662 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
TRIM13-206ENST00000457662 NECTIN2Q92692 538 aa23.5■■□□□ 1.35
TRIM13-206ENST00000457662 ARXQ96QS3 562 aa23.5■■□□□ 1.35
TRIM13-206ENST00000457662 GYS1P13807 737 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 MYL6BP14649 208 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 POLD1P28340 1107 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 TSPYL6Q8N831 410 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 SRP68Q9UHB9 627 aaKnown RBP23.49■■□□□ 1.35
TRIM13-206ENST00000457662 PTGER2P43116 358 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 PDIA6Q15084 440 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 TWISTNBQ3B726 338 aaPredicted RBP23.49■■□□□ 1.35
TRIM13-206ENST00000457662 MSL1Q68DK7 614 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 DZIP3Q86Y13 1208 aaKnown RBP23.49■■□□□ 1.35
TRIM13-206ENST00000457662 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
TRIM13-206ENST00000457662 TBC1D2BQ9UPU7 963 aa23.49■■□□□ 1.35
TRIM13-206ENST00000457662 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
TRIM13-206ENST00000457662 USPL1Q5W0Q7 1092 aa23.48■■□□□ 1.35
TRIM13-206ENST00000457662 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
TRIM13-206ENST00000457662 DBF4Q9UBU7 674 aaPredicted RBP23.48■■□□□ 1.35
TRIM13-206ENST00000457662 CCDC30Q5VVM6 783 aa23.47■■□□□ 1.35
TRIM13-206ENST00000457662 C4AP0C0L4 1744 aa23.46■■□□□ 1.35
TRIM13-206ENST00000457662 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
TRIM13-206ENST00000457662 CHPF2Q9P2E5 772 aa23.45■■□□□ 1.34
TRIM13-206ENST00000457662 CAMTA2O94983 1202 aa23.44■■□□□ 1.34
TRIM13-206ENST00000457662 FKBP8Q14318 412 aa23.44■■□□□ 1.34
TRIM13-206ENST00000457662 PROSER3Q2NL68 480 aa23.44■■□□□ 1.34
TRIM13-206ENST00000457662 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
TRIM13-206ENST00000457662 TRMT2AQ8IZ69 625 aaKnown RBP23.44■■□□□ 1.34
TRIM13-206ENST00000457662 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
TRIM13-206ENST00000457662 RGL2O15211 777 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 VAMP4O75379 141 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 ANXA1P04083 346 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 BCL2L12Q9HB09 334 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 COL24A1Q17RW2 1714 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 LRP5O75197 1615 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 CLEC4GQ6UXB4 293 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 KIF6Q6ZMV9 814 aa23.43■■□□□ 1.34
TRIM13-206ENST00000457662 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
TRIM13-206ENST00000457662 ERVV-1B6SEH8 477 aa23.42■■□□□ 1.34
TRIM13-206ENST00000457662 MMP10P09238 476 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms