RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
COMMD1-205ENST00000455659 STARD3NLO95772 234 aa9.25□□□□□ -0.93
COMMD1-205ENST00000455659 CYP19A1P11511 503 aaPredicted RBP9.25□□□□□ -0.93
COMMD1-205ENST00000455659 POLD1P28340 1107 aa9.25□□□□□ -0.93
COMMD1-205ENST00000455659 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
COMMD1-205ENST00000455659 MIS18AQ9NYP9 233 aa9.25□□□□□ -0.93
COMMD1-205ENST00000455659 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
COMMD1-205ENST00000455659 KIF13BQ9NQT8 1826 aa9.25□□□□□ -0.93
COMMD1-205ENST00000455659 ANKRD36CQ5JPF3 1778 aa9.24□□□□□ -0.93
COMMD1-205ENST00000455659 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
COMMD1-205ENST00000455659 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
COMMD1-205ENST00000455659 PTGER2P43116 358 aa9.24□□□□□ -0.93
COMMD1-205ENST00000455659 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
COMMD1-205ENST00000455659 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
COMMD1-205ENST00000455659 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
COMMD1-205ENST00000455659 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
COMMD1-205ENST00000455659 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
COMMD1-205ENST00000455659 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
COMMD1-205ENST00000455659 PRAMEF22A3QJZ6 481 aa9.23□□□□□ -0.93
COMMD1-205ENST00000455659 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
COMMD1-205ENST00000455659 RFC4P35249 363 aa9.23□□□□□ -0.93
COMMD1-205ENST00000455659 CALD1Q05682 793 aaKnown RBP9.23□□□□□ -0.93
COMMD1-205ENST00000455659 TRAPPC3LQ5T215 181 aa9.23□□□□□ -0.93
COMMD1-205ENST00000455659 SGIP1Q9BQI5 828 aa9.23□□□□□ -0.93
COMMD1-205ENST00000455659 TEX13AQ9BXU3 409 aaPredicted RBP9.23□□□□□ -0.93
COMMD1-205ENST00000455659 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
COMMD1-205ENST00000455659 KIAA1551Q9HCM1 1747 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 NUP98P52948 1817 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 CCER2I3L3R5 266 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 CANXP27824 592 aaKnown RBP9.22□□□□□ -0.93
COMMD1-205ENST00000455659 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
COMMD1-205ENST00000455659 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 ARXQ96QS3 562 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 BABAM1Q9NWV8 329 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 C10orf71Q711Q0 1435 aa9.22□□□□□ -0.93
COMMD1-205ENST00000455659 BRCA1P38398 1863 aaKnown RBP9.21□□□□□ -0.93
COMMD1-205ENST00000455659 PIP4K2AP48426 406 aaPredicted RBP9.21□□□□□ -0.94
COMMD1-205ENST00000455659 NPM2Q86SE8 214 aaKnown RBP9.21□□□□□ -0.94
COMMD1-205ENST00000455659 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
COMMD1-205ENST00000455659 IFT57Q9NWB7 429 aa9.21□□□□□ -0.94
COMMD1-205ENST00000455659 SRP68Q9UHB9 627 aaKnown RBP9.21□□□□□ -0.94
COMMD1-205ENST00000455659 N4BP2Q86UW6 1770 aaPredicted RBP9.21□□□□□ -0.94
COMMD1-205ENST00000455659 DLEC1Q9Y238 1755 aa9.21□□□□□ -0.94
COMMD1-205ENST00000455659 COL11A2P13942 1736 aaPredicted RBP9.2□□□□□ -0.94
COMMD1-205ENST00000455659 ZPR1O75312 459 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
COMMD1-205ENST00000455659 A1BGP04217 495 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 MMP10P09238 476 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 GYS1P13807 737 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 IL6STP40189 918 aaPredicted RBP9.2□□□□□ -0.94
COMMD1-205ENST00000455659 CCDC27Q2M243 656 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 FHDC1Q9C0D6 1143 aaPredicted RBP9.2□□□□□ -0.94
COMMD1-205ENST00000455659 MBIPQ9NS73 344 aa9.2□□□□□ -0.94
COMMD1-205ENST00000455659 CACNA1SQ13698 1873 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 ANKRD31Q8N7Z5 1873 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 CACNA1FO60840 1977 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 A0A087WZG4 1122 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 CHL1O00533 1208 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 EIF5P55010 431 aaKnown RBP9.19□□□□□ -0.94
COMMD1-205ENST00000455659 GNAI1P63096 354 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 USPL1Q5W0Q7 1092 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 WWC1Q8IX03 1113 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 SALL2Q9Y467 1007 aaPredicted RBP9.19□□□□□ -0.94
COMMD1-205ENST00000455659 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
COMMD1-205ENST00000455659 PXDNLA1KZ92 1463 aa9.18□□□□□ -0.94
COMMD1-205ENST00000455659 FKBP8Q14318 412 aa9.18□□□□□ -0.94
COMMD1-205ENST00000455659 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
COMMD1-205ENST00000455659 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
COMMD1-205ENST00000455659 TNRC6CQ9HCJ0 1690 aaKnown RBP9.17□□□□□ -0.94
COMMD1-205ENST00000455659 CARMIL3Q8ND23 1372 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 IL16Q14005 1332 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 HOXB7P09629 217 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
COMMD1-205ENST00000455659 DDR1Q08345 913 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 NCBP3Q53F19 620 aaKnown RBP9.17□□□□□ -0.94
COMMD1-205ENST00000455659 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 NBPF10Q6P3W6 841 aaKnown RBP9.17□□□□□ -0.94
COMMD1-205ENST00000455659 NLGN1Q8N2Q7 840 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 NBPF15Q8N660 670 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 TSR2Q969E8 191 aaKnown RBP9.17□□□□□ -0.94
COMMD1-205ENST00000455659 LAMB2P55268 1798 aa9.17□□□□□ -0.94
COMMD1-205ENST00000455659 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 CHD4Q14839 1912 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 CAMTA2O94983 1202 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 MYL6BP14649 208 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 KIF6Q6ZMV9 814 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 MIER1Q8N108 512 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 ZNF652Q9Y2D9 606 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms