RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZBTB1Q9Y2K1 713 aa18.64■□□□□ 0.57
HDAC4-205ENST00000454542 APAF1O14727 1248 aa18.63■□□□□ 0.57
HDAC4-205ENST00000454542 COL15A1P39059 1388 aa18.63■□□□□ 0.57
HDAC4-205ENST00000454542 USP42Q9H9J4 1324 aaKnown RBP18.61■□□□□ 0.57
HDAC4-205ENST00000454542 STARD3NLO95772 234 aa18.61■□□□□ 0.57
HDAC4-205ENST00000454542 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
HDAC4-205ENST00000454542 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
HDAC4-205ENST00000454542 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
HDAC4-205ENST00000454542 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
HDAC4-205ENST00000454542 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
HDAC4-205ENST00000454542 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
HDAC4-205ENST00000454542 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
HDAC4-205ENST00000454542 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
HDAC4-205ENST00000454542 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
HDAC4-205ENST00000454542 MSH5O43196 834 aa18.59■□□□□ 0.57
HDAC4-205ENST00000454542 MSL1Q68DK7 614 aa18.59■□□□□ 0.57
HDAC4-205ENST00000454542 CHL1O00533 1208 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 GYS1P13807 737 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 POLD1P28340 1107 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.56
HDAC4-205ENST00000454542 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 ARXQ96QS3 562 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
HDAC4-205ENST00000454542 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
HDAC4-205ENST00000454542 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-205ENST00000454542 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
HDAC4-205ENST00000454542 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-205ENST00000454542 PPP1R1BQ9UD71 204 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-205ENST00000454542 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
HDAC4-205ENST00000454542 KIAA1551Q9HCM1 1747 aa18.57■□□□□ 0.56
HDAC4-205ENST00000454542 RFC4P35249 363 aa18.56■□□□□ 0.56
HDAC4-205ENST00000454542 CCER2I3L3R5 266 aa18.55■□□□□ 0.56
HDAC4-205ENST00000454542 A1BGP04217 495 aa18.55■□□□□ 0.56
HDAC4-205ENST00000454542 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
HDAC4-205ENST00000454542 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
HDAC4-205ENST00000454542 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
HDAC4-205ENST00000454542 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-205ENST00000454542 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
HDAC4-205ENST00000454542 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
HDAC4-205ENST00000454542 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
HDAC4-205ENST00000454542 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
HDAC4-205ENST00000454542 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
HDAC4-205ENST00000454542 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
HDAC4-205ENST00000454542 NLGN1Q8N2Q7 840 aa18.53■□□□□ 0.56
HDAC4-205ENST00000454542 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
HDAC4-205ENST00000454542 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
HDAC4-205ENST00000454542 ERBB4Q15303 1308 aa18.52■□□□□ 0.56
HDAC4-205ENST00000454542 A0A087WZG4 1122 aa18.52■□□□□ 0.56
HDAC4-205ENST00000454542 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
HDAC4-205ENST00000454542 MMP10P09238 476 aa18.51■□□□□ 0.55
HDAC4-205ENST00000454542 FKBP8Q14318 412 aa18.51■□□□□ 0.55
HDAC4-205ENST00000454542 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
HDAC4-205ENST00000454542 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
HDAC4-205ENST00000454542 MBIPQ9NS73 344 aa18.51■□□□□ 0.55
HDAC4-205ENST00000454542 HOXB7P09629 217 aa18.5■□□□□ 0.55
HDAC4-205ENST00000454542 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
HDAC4-205ENST00000454542 IL16Q14005 1332 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 RGL2O15211 777 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 ZPR1O75312 459 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 GNAI1P63096 354 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 DDR1Q08345 913 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
HDAC4-205ENST00000454542 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
HDAC4-205ENST00000454542 TM4SF1P30408 202 aa18.48■□□□□ 0.55
HDAC4-205ENST00000454542 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-205ENST00000454542 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
HDAC4-205ENST00000454542 NGEFQ8N5V2 710 aa18.48■□□□□ 0.55
HDAC4-205ENST00000454542 CD2APQ9Y5K6 639 aa18.47■□□□□ 0.55
HDAC4-205ENST00000454542 BRCA1P38398 1863 aaKnown RBP18.47■□□□□ 0.55
HDAC4-205ENST00000454542 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.55
HDAC4-205ENST00000454542 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
HDAC4-205ENST00000454542 PDIA6Q15084 440 aa18.46■□□□□ 0.55
HDAC4-205ENST00000454542 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
HDAC4-205ENST00000454542 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
HDAC4-205ENST00000454542 NFIXQ14938 502 aa18.45■□□□□ 0.54
HDAC4-205ENST00000454542 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
HDAC4-205ENST00000454542 NLGN2Q8NFZ4 835 aa18.45■□□□□ 0.54
HDAC4-205ENST00000454542 DLEC1Q9Y238 1755 aa18.45■□□□□ 0.54
HDAC4-205ENST00000454542 NUP98P52948 1817 aa18.44■□□□□ 0.54
HDAC4-205ENST00000454542 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
HDAC4-205ENST00000454542 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-205ENST00000454542 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
HDAC4-205ENST00000454542 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
HDAC4-205ENST00000454542 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
HDAC4-205ENST00000454542 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
HDAC4-205ENST00000454542 PARP3Q9Y6F1 533 aa18.43■□□□□ 0.54
HDAC4-205ENST00000454542 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
HDAC4-205ENST00000454542 N4BP2Q86UW6 1770 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-205ENST00000454542 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
HDAC4-205ENST00000454542 PROSER3Q2NL68 480 aa18.42■□□□□ 0.54
HDAC4-205ENST00000454542 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
HDAC4-205ENST00000454542 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
HDAC4-205ENST00000454542 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
HDAC4-205ENST00000454542 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
HDAC4-205ENST00000454542 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
HDAC4-205ENST00000454542 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
HDAC4-205ENST00000454542 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
HDAC4-205ENST00000454542 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms