RNA–Protein interactions for RNA: ENST00000452161.5

EFEMP1-209, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-209ENST00000452161 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
EFEMP1-209ENST00000452161 MYH14Q7Z406 1995 aaKnown RBP17.82■□□□□ 0.44
EFEMP1-209ENST00000452161 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
EFEMP1-209ENST00000452161 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
EFEMP1-209ENST00000452161 RTCBQ9Y3I0 505 aaKnown RBP17.81■□□□□ 0.44
EFEMP1-209ENST00000452161 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
EFEMP1-209ENST00000452161 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
EFEMP1-209ENST00000452161 HOXB7P09629 217 aa17.8■□□□□ 0.44
EFEMP1-209ENST00000452161 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
EFEMP1-209ENST00000452161 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
EFEMP1-209ENST00000452161 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
EFEMP1-209ENST00000452161 GNPATO15228 680 aa17.79■□□□□ 0.44
EFEMP1-209ENST00000452161 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
EFEMP1-209ENST00000452161 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
EFEMP1-209ENST00000452161 TRAPPC3LQ5T215 181 aa17.78■□□□□ 0.44
EFEMP1-209ENST00000452161 COL23A1Q86Y22 540 aaPredicted RBP17.78■□□□□ 0.44
EFEMP1-209ENST00000452161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.77■□□□□ 0.44
EFEMP1-209ENST00000452161 IL6STP40189 918 aaPredicted RBP17.77■□□□□ 0.44
EFEMP1-209ENST00000452161 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.44
EFEMP1-209ENST00000452161 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
EFEMP1-209ENST00000452161 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
EFEMP1-209ENST00000452161 A1BGP04217 495 aa17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 CASZ1Q86V15 1759 aa17.76■□□□□ 0.43
EFEMP1-209ENST00000452161 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
EFEMP1-209ENST00000452161 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
EFEMP1-209ENST00000452161 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
EFEMP1-209ENST00000452161 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
EFEMP1-209ENST00000452161 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
EFEMP1-209ENST00000452161 MTFR1LQ9H019 292 aa17.74■□□□□ 0.43
EFEMP1-209ENST00000452161 A0A087WZG4 1122 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 E9PSI1 815 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 TRMT2AQ8IZ69 625 aaKnown RBP17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 LAMB4A4D0S4 1761 aa17.73■□□□□ 0.43
EFEMP1-209ENST00000452161 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
EFEMP1-209ENST00000452161 RFC4P35249 363 aa17.72■□□□□ 0.43
EFEMP1-209ENST00000452161 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
EFEMP1-209ENST00000452161 PHF14O94880 888 aa17.71■□□□□ 0.43
EFEMP1-209ENST00000452161 PDIA6Q15084 440 aa17.71■□□□□ 0.43
EFEMP1-209ENST00000452161 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
EFEMP1-209ENST00000452161 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
EFEMP1-209ENST00000452161 COL15A1P39059 1388 aa17.7■□□□□ 0.42
EFEMP1-209ENST00000452161 RGL2O15211 777 aa17.7■□□□□ 0.42
EFEMP1-209ENST00000452161 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
EFEMP1-209ENST00000452161 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
EFEMP1-209ENST00000452161 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
EFEMP1-209ENST00000452161 ZPR1O75312 459 aa17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 ZBTB7AO95365 584 aa17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 GYS1P13807 737 aa17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
EFEMP1-209ENST00000452161 ELL2O00472 640 aaPredicted RBP17.67■□□□□ 0.42
EFEMP1-209ENST00000452161 VAMP4O75379 141 aa17.67■□□□□ 0.42
EFEMP1-209ENST00000452161 PTGER2P43116 358 aa17.67■□□□□ 0.42
EFEMP1-209ENST00000452161 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
EFEMP1-209ENST00000452161 CCDC30Q5VVM6 783 aa17.66■□□□□ 0.42
EFEMP1-209ENST00000452161 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
EFEMP1-209ENST00000452161 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
EFEMP1-209ENST00000452161 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
EFEMP1-209ENST00000452161 C4AP0C0L4 1744 aa17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 CLEC4GQ6UXB4 293 aa17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
EFEMP1-209ENST00000452161 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 MYL6BP14649 208 aa17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 USPL1Q5W0Q7 1092 aa17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 SRP68Q9UHB9 627 aaKnown RBP17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
EFEMP1-209ENST00000452161 SRCAPQ6ZRS2 3230 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 POLD1P28340 1107 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 TM4SF1P30408 202 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
EFEMP1-209ENST00000452161 LRP5O75197 1615 aa17.62■□□□□ 0.41
EFEMP1-209ENST00000452161 CT47B1P0C2W7 299 aaPredicted RBP17.62■□□□□ 0.41
EFEMP1-209ENST00000452161 FKBP8Q14318 412 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms