RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 COL23A1Q86Y22 540 aaPredicted RBP31.75■■■□□ 2.67
TPR-202ENST00000451586 MBIPQ9NS73 344 aa31.75■■■□□ 2.67
TPR-202ENST00000451586 CCDC87Q9NVE4 849 aa31.75■■■□□ 2.67
TPR-202ENST00000451586 UBR3Q6ZT12 1888 aa31.74■■■□□ 2.67
TPR-202ENST00000451586 GIGYF1O75420 1035 aaPredicted RBP31.74■■■□□ 2.67
TPR-202ENST00000451586 RPS6KA4O75676 772 aa31.74■■■□□ 2.67
TPR-202ENST00000451586 RTCBQ9Y3I0 505 aaKnown RBP31.74■■■□□ 2.67
TPR-202ENST00000451586 QSER1Q2KHR3 1735 aa31.73■■■□□ 2.67
TPR-202ENST00000451586 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.72■■■□□ 2.67
TPR-202ENST00000451586 MSH5O43196 834 aa31.72■■■□□ 2.67
TPR-202ENST00000451586 WDR63Q8IWG1 891 aa31.72■■■□□ 2.67
TPR-202ENST00000451586 SSFA2P28290 1259 aa31.71■■■□□ 2.67
TPR-202ENST00000451586 FLAD1Q8NFF5 587 aa31.71■■■□□ 2.67
TPR-202ENST00000451586 ZBTB1Q9Y2K1 713 aa31.71■■■□□ 2.67
TPR-202ENST00000451586 CASZ1Q86V15 1759 aa31.71■■■□□ 2.67
TPR-202ENST00000451586 A1BGP04217 495 aa31.7■■■□□ 2.67
TPR-202ENST00000451586 KRT24Q2M2I5 525 aa31.7■■■□□ 2.67
TPR-202ENST00000451586 IL16Q14005 1332 aa31.7■■■□□ 2.66
TPR-202ENST00000451586 CANXP27824 592 aaKnown RBP31.69■■■□□ 2.66
TPR-202ENST00000451586 TRAPPC3LQ5T215 181 aa31.69■■■□□ 2.66
TPR-202ENST00000451586 ZBTB7AO95365 584 aa31.67■■■□□ 2.66
TPR-202ENST00000451586 ARHGEF1Q92888 912 aaKnown RBP31.66■■■□□ 2.66
TPR-202ENST00000451586 TSR2Q969E8 191 aaKnown RBP31.66■■■□□ 2.66
TPR-202ENST00000451586 SOS1Q07889 1333 aaPredicted RBP31.66■■■□□ 2.66
TPR-202ENST00000451586 ZNF521Q96K83 1311 aa31.66■■■□□ 2.66
TPR-202ENST00000451586 PIP4K2AP48426 406 aaPredicted RBP31.65■■■□□ 2.66
TPR-202ENST00000451586 ADRA2BP18089 450 aa31.64■■■□□ 2.66
TPR-202ENST00000451586 SPINK5Q9NQ38 1064 aaPredicted RBP31.64■■■□□ 2.66
TPR-202ENST00000451586 SLC16A10Q8TF71 515 aa31.63■■■□□ 2.65
TPR-202ENST00000451586 ATF5Q9Y2D1 282 aaPredicted RBP31.63■■■□□ 2.65
TPR-202ENST00000451586 EIF2S2P20042 333 aaKnown RBP31.62■■■□□ 2.65
TPR-202ENST00000451586 LAMB4A4D0S4 1761 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 NBPF26B4DH59 902 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 RFC4P35249 363 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 EIF5P55010 431 aaKnown RBP31.61■■■□□ 2.65
TPR-202ENST00000451586 DUSP27Q5VZP5 1158 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 NBPF10Q6P3W6 841 aaKnown RBP31.61■■■□□ 2.65
TPR-202ENST00000451586 NBPF15Q8N660 670 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 MTFR1LQ9H019 292 aa31.61■■■□□ 2.65
TPR-202ENST00000451586 C8orf58Q8NAV2 365 aa31.6■■■□□ 2.65
TPR-202ENST00000451586 ZNF330Q9Y3S2 320 aaPredicted RBP31.6■■■□□ 2.65
TPR-202ENST00000451586 ELL2O00472 640 aaPredicted RBP31.59■■■□□ 2.65
TPR-202ENST00000451586 IL6STP40189 918 aaPredicted RBP31.59■■■□□ 2.65
TPR-202ENST00000451586 FANCIQ9NVI1 1328 aa31.58■■■□□ 2.65
TPR-202ENST00000451586 NECTIN2Q92692 538 aa31.58■■■□□ 2.65
TPR-202ENST00000451586 SPON1Q9HCB6 807 aa31.58■■■□□ 2.65
TPR-202ENST00000451586 COL15A1P39059 1388 aa31.57■■■□□ 2.64
TPR-202ENST00000451586 MSL1Q68DK7 614 aa31.57■■■□□ 2.64
TPR-202ENST00000451586 GOLGA2Q08379 1002 aa31.56■■■□□ 2.64
TPR-202ENST00000451586 SRP68Q9UHB9 627 aaKnown RBP31.56■■■□□ 2.64
TPR-202ENST00000451586 HOXB7P09629 217 aa31.55■■■□□ 2.64
TPR-202ENST00000451586 HNRNPUQ00839 825 aaKnown RBP eCLIP31.55■■■□□ 2.64
TPR-202ENST00000451586 TSPYL6Q8N831 410 aa31.55■■■□□ 2.64
TPR-202ENST00000451586 A0A087WZG4 1122 aa31.54■■■□□ 2.64
TPR-202ENST00000451586 MYH16Q9H6N6 1097 aa31.54■■■□□ 2.64
TPR-202ENST00000451586 C4AP0C0L4 1744 aa31.54■■■□□ 2.64
TPR-202ENST00000451586 NPM2Q86SE8 214 aaKnown RBP31.53■■■□□ 2.64
TPR-202ENST00000451586 ARXQ96QS3 562 aa31.53■■■□□ 2.64
TPR-202ENST00000451586 USP42Q9H9J4 1324 aaKnown RBP31.52■■■□□ 2.64
TPR-202ENST00000451586 ZPR1O75312 459 aa31.52■■■□□ 2.64
TPR-202ENST00000451586 MYL6BP14649 208 aa31.52■■■□□ 2.64
TPR-202ENST00000451586 HDGFL1Q5TGJ6 251 aa31.52■■■□□ 2.64
TPR-202ENST00000451586 NARFQ9UHQ1 456 aa31.52■■■□□ 2.64
TPR-202ENST00000451586 TBC1D2BQ9UPU7 963 aa31.52■■■□□ 2.64
TPR-202ENST00000451586 GYS1P13807 737 aa31.51■■■□□ 2.63
TPR-202ENST00000451586 PTGER2P43116 358 aa31.51■■■□□ 2.63
TPR-202ENST00000451586 PDIA6Q15084 440 aa31.51■■■□□ 2.63
TPR-202ENST00000451586 USPL1Q5W0Q7 1092 aa31.51■■■□□ 2.63
TPR-202ENST00000451586 CDCA7LQ96GN5 454 aa31.51■■■□□ 2.63
TPR-202ENST00000451586 ERBB4Q15303 1308 aa31.5■■■□□ 2.63
TPR-202ENST00000451586 ANXA1P04083 346 aa31.5■■■□□ 2.63
TPR-202ENST00000451586 EXOSC9Q06265 439 aaKnown RBP31.5■■■□□ 2.63
TPR-202ENST00000451586 PROSER3Q2NL68 480 aa31.5■■■□□ 2.63
TPR-202ENST00000451586 E9PSI1 815 aa31.49■■■□□ 2.63
TPR-202ENST00000451586 SLFN5Q08AF3 891 aa31.49■■■□□ 2.63
TPR-202ENST00000451586 SGIP1Q9BQI5 828 aa31.49■■■□□ 2.63
TPR-202ENST00000451586 TWISTNBQ3B726 338 aaPredicted RBP31.48■■■□□ 2.63
TPR-202ENST00000451586 DZIP3Q86Y13 1208 aaKnown RBP31.48■■■□□ 2.63
TPR-202ENST00000451586 CHPF2Q9P2E5 772 aa31.47■■■□□ 2.63
TPR-202ENST00000451586 FKBP8Q14318 412 aa31.46■■■□□ 2.63
TPR-202ENST00000451586 NLGN1Q8N2Q7 840 aa31.46■■■□□ 2.63
TPR-202ENST00000451586 BCL2L12Q9HB09 334 aa31.46■■■□□ 2.63
TPR-202ENST00000451586 POLD1P28340 1107 aa31.45■■■□□ 2.63
TPR-202ENST00000451586 COL24A1Q17RW2 1714 aa31.45■■■□□ 2.63
TPR-202ENST00000451586 LRP10Q7Z4F1 713 aa31.45■■■□□ 2.63
TPR-202ENST00000451586 DDX21Q9NR30 783 aaKnown RBP eCLIP31.45■■■□□ 2.63
TPR-202ENST00000451586 LRP5O75197 1615 aa31.44■■■□□ 2.62
TPR-202ENST00000451586 CAMTA2O94983 1202 aa31.43■■■□□ 2.62
TPR-202ENST00000451586 TTLL7Q6ZT98 887 aa31.43■■■□□ 2.62
TPR-202ENST00000451586 DBF4Q9UBU7 674 aaPredicted RBP31.43■■■□□ 2.62
TPR-202ENST00000451586 VAMP4O75379 141 aa31.42■■■□□ 2.62
TPR-202ENST00000451586 CCDC30Q5VVM6 783 aa31.41■■■□□ 2.62
TPR-202ENST00000451586 TRMT2AQ8IZ69 625 aaKnown RBP31.41■■■□□ 2.62
TPR-202ENST00000451586 TCERG1O14776 1098 aaKnown RBP31.4■■■□□ 2.62
TPR-202ENST00000451586 MMP10P09238 476 aa31.4■■■□□ 2.62
TPR-202ENST00000451586 CHMP4AQ9BY43 222 aa31.4■■■□□ 2.62
TPR-202ENST00000451586 COPS6Q7L5N1 327 aa31.39■■■□□ 2.62
TPR-202ENST00000451586 XAGE3Q8WTP9 111 aa31.39■■■□□ 2.62
TPR-202ENST00000451586 PPP1R1BQ9UD71 204 aaPredicted RBP31.39■■■□□ 2.62
TPR-202ENST00000451586 AIMP1Q12904 312 aaKnown RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms