RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 ZPR1O75312 459 aa15.74■□□□□ 0.11
SMPD4-212ENST00000451542 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
SMPD4-212ENST00000451542 ARHGEF1Q92888 912 aaKnown RBP15.74■□□□□ 0.11
SMPD4-212ENST00000451542 MYH14Q7Z406 1995 aaKnown RBP15.74■□□□□ 0.11
SMPD4-212ENST00000451542 KCNQ3O43525 872 aa15.73■□□□□ 0.11
SMPD4-212ENST00000451542 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
SMPD4-212ENST00000451542 MIS18AQ9NYP9 233 aa15.73■□□□□ 0.11
SMPD4-212ENST00000451542 MSL1Q68DK7 614 aa15.72■□□□□ 0.11
SMPD4-212ENST00000451542 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
SMPD4-212ENST00000451542 SOS1Q07889 1333 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-212ENST00000451542 IL6STP40189 918 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-212ENST00000451542 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
SMPD4-212ENST00000451542 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
SMPD4-212ENST00000451542 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
SMPD4-212ENST00000451542 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
SMPD4-212ENST00000451542 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
SMPD4-212ENST00000451542 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
SMPD4-212ENST00000451542 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
SMPD4-212ENST00000451542 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SMPD4-212ENST00000451542 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-212ENST00000451542 COL15A1P39059 1388 aa15.7■□□□□ 0.1
SMPD4-212ENST00000451542 KDM3BQ7LBC6 1761 aa15.7■□□□□ 0.1
SMPD4-212ENST00000451542 COL24A1Q17RW2 1714 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 GNAI1P63096 354 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 SMIM5Q71RC9 77 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
SMPD4-212ENST00000451542 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
SMPD4-212ENST00000451542 CHL1O00533 1208 aa15.68■□□□□ 0.1
SMPD4-212ENST00000451542 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-212ENST00000451542 A1BGP04217 495 aa15.68■□□□□ 0.1
SMPD4-212ENST00000451542 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
SMPD4-212ENST00000451542 CCDC27Q2M243 656 aa15.68■□□□□ 0.1
SMPD4-212ENST00000451542 FHDC1Q9C0D6 1143 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-212ENST00000451542 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 MMP10P09238 476 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 GYS1P13807 737 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
SMPD4-212ENST00000451542 SYT17Q9BSW7 474 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 CHMP4AQ9BY43 222 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
SMPD4-212ENST00000451542 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
SMPD4-212ENST00000451542 CD2APQ9Y5K6 639 aa15.66■□□□□ 0.1
SMPD4-212ENST00000451542 ERBB4Q15303 1308 aa15.66■□□□□ 0.1
SMPD4-212ENST00000451542 C4AP0C0L4 1744 aa15.65■□□□□ 0.1
SMPD4-212ENST00000451542 SRP68Q9UHB9 627 aaKnown RBP15.65■□□□□ 0.1
SMPD4-212ENST00000451542 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
SMPD4-212ENST00000451542 PRAMEF22A3QJZ6 481 aa15.64■□□□□ 0.09
SMPD4-212ENST00000451542 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
SMPD4-212ENST00000451542 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.09
SMPD4-212ENST00000451542 HOXB7P09629 217 aa15.63■□□□□ 0.09
SMPD4-212ENST00000451542 FKBP8Q14318 412 aa15.63■□□□□ 0.09
SMPD4-212ENST00000451542 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
SMPD4-212ENST00000451542 RGL2O15211 777 aa15.62■□□□□ 0.09
SMPD4-212ENST00000451542 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
SMPD4-212ENST00000451542 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
SMPD4-212ENST00000451542 CLEC4GQ6UXB4 293 aa15.61■□□□□ 0.09
SMPD4-212ENST00000451542 KIF6Q6ZMV9 814 aa15.61■□□□□ 0.09
SMPD4-212ENST00000451542 MBIPQ9NS73 344 aa15.61■□□□□ 0.09
SMPD4-212ENST00000451542 IL16Q14005 1332 aa15.61■□□□□ 0.09
SMPD4-212ENST00000451542 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
SMPD4-212ENST00000451542 ZNF853P0CG23 659 aa15.6■□□□□ 0.09
SMPD4-212ENST00000451542 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
SMPD4-212ENST00000451542 WDR63Q8IWG1 891 aa15.6■□□□□ 0.09
SMPD4-212ENST00000451542 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
SMPD4-212ENST00000451542 NPHP1O15259 732 aa15.59■□□□□ 0.09
SMPD4-212ENST00000451542 MYL6BP14649 208 aa15.59■□□□□ 0.09
SMPD4-212ENST00000451542 TM4SF1P30408 202 aa15.59■□□□□ 0.09
SMPD4-212ENST00000451542 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-212ENST00000451542 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
SMPD4-212ENST00000451542 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
SMPD4-212ENST00000451542 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-212ENST00000451542 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
SMPD4-212ENST00000451542 TGFB2P61812 414 aa15.58■□□□□ 0.08
SMPD4-212ENST00000451542 NFIXQ14938 502 aa15.58■□□□□ 0.08
SMPD4-212ENST00000451542 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
SMPD4-212ENST00000451542 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
SMPD4-212ENST00000451542 GPR162Q16538 588 aa15.57■□□□□ 0.08
SMPD4-212ENST00000451542 BICDL1Q6ZP65 573 aa15.57■□□□□ 0.08
SMPD4-212ENST00000451542 BCL2L12Q9HB09 334 aa15.57■□□□□ 0.08
SMPD4-212ENST00000451542 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMPD4-212ENST00000451542 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-212ENST00000451542 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
SMPD4-212ENST00000451542 SERPINB2P05120 415 aa15.56■□□□□ 0.08
SMPD4-212ENST00000451542 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
SMPD4-212ENST00000451542 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
SMPD4-212ENST00000451542 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
SMPD4-212ENST00000451542 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 MAP3K15Q6ZN16 1313 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 DDR1Q08345 913 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 NECTIN2Q92692 538 aa15.55■□□□□ 0.08
SMPD4-212ENST00000451542 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 GOLGA2Q08379 1002 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms