RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 AMIGO3Q86WK7 504 aa13.89□□□□□ -0.19
SMPD4-211ENST00000449159 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
SMPD4-211ENST00000449159 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SMPD4-211ENST00000449159 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
SMPD4-211ENST00000449159 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
SMPD4-211ENST00000449159 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
SMPD4-211ENST00000449159 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
SMPD4-211ENST00000449159 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
SMPD4-211ENST00000449159 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
SMPD4-211ENST00000449159 AK7Q96M32 723 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 IFT57Q9NWB7 429 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
SMPD4-211ENST00000449159 GNPATO15228 680 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-211ENST00000449159 POLD1P28340 1107 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 GNAI1P63096 354 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
SMPD4-211ENST00000449159 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-211ENST00000449159 CEP350Q5VT06 3117 aa13.86□□□□□ -0.19
SMPD4-211ENST00000449159 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-211ENST00000449159 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
SMPD4-211ENST00000449159 WDR63Q8IWG1 891 aa13.85□□□□□ -0.19
SMPD4-211ENST00000449159 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
SMPD4-211ENST00000449159 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
SMPD4-211ENST00000449159 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
SMPD4-211ENST00000449159 IL16Q14005 1332 aa13.85□□□□□ -0.19
SMPD4-211ENST00000449159 PHF14O94880 888 aa13.84□□□□□ -0.19
SMPD4-211ENST00000449159 GPR162Q16538 588 aa13.84□□□□□ -0.19
SMPD4-211ENST00000449159 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
SMPD4-211ENST00000449159 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
SMPD4-211ENST00000449159 STARD3NLO95772 234 aa13.83□□□□□ -0.2
SMPD4-211ENST00000449159 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-211ENST00000449159 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.2
SMPD4-211ENST00000449159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 A1BGP04217 495 aa13.82□□□□□ -0.2
SMPD4-211ENST00000449159 CANXP27824 592 aaKnown RBP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
SMPD4-211ENST00000449159 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-211ENST00000449159 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
SMPD4-211ENST00000449159 SSFA2P28290 1259 aa13.81□□□□□ -0.2
SMPD4-211ENST00000449159 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
SMPD4-211ENST00000449159 C8orf58Q8NAV2 365 aa13.81□□□□□ -0.2
SMPD4-211ENST00000449159 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
SMPD4-211ENST00000449159 SCN7AQ01118 1682 aa13.81□□□□□ -0.2
SMPD4-211ENST00000449159 BCORQ6W2J9 1755 aa13.81□□□□□ -0.2
SMPD4-211ENST00000449159 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
SMPD4-211ENST00000449159 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-211ENST00000449159 MSH5O43196 834 aa13.8□□□□□ -0.2
SMPD4-211ENST00000449159 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
SMPD4-211ENST00000449159 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
SMPD4-211ENST00000449159 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
SMPD4-211ENST00000449159 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
SMPD4-211ENST00000449159 COL15A1P39059 1388 aa13.8□□□□□ -0.2
SMPD4-211ENST00000449159 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
SMPD4-211ENST00000449159 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
SMPD4-211ENST00000449159 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
SMPD4-211ENST00000449159 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
SMPD4-211ENST00000449159 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
SMPD4-211ENST00000449159 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
SMPD4-211ENST00000449159 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
SMPD4-211ENST00000449159 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-211ENST00000449159 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
SMPD4-211ENST00000449159 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
SMPD4-211ENST00000449159 ANXA1P04083 346 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 HOXB7P09629 217 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 ADRA2BP18089 450 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-211ENST00000449159 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
SMPD4-211ENST00000449159 SLFN5Q08AF3 891 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 PROSER3Q2NL68 480 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
SMPD4-211ENST00000449159 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
SMPD4-211ENST00000449159 MYL6BP14649 208 aa13.76□□□□□ -0.21
SMPD4-211ENST00000449159 PDIA6Q15084 440 aa13.76□□□□□ -0.21
SMPD4-211ENST00000449159 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
SMPD4-211ENST00000449159 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
SMPD4-211ENST00000449159 KIF13BQ9NQT8 1826 aa13.76□□□□□ -0.21
SMPD4-211ENST00000449159 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
SMPD4-211ENST00000449159 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
SMPD4-211ENST00000449159 E9PSI1 815 aa13.75□□□□□ -0.21
SMPD4-211ENST00000449159 RFC4P35249 363 aa13.75□□□□□ -0.21
SMPD4-211ENST00000449159 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-211ENST00000449159 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
SMPD4-211ENST00000449159 NUP98P52948 1817 aa13.75□□□□□ -0.21
SMPD4-211ENST00000449159 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
SMPD4-211ENST00000449159 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
SMPD4-211ENST00000449159 GRIN3BO60391 1043 aa13.74□□□□□ -0.21
SMPD4-211ENST00000449159 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMPD4-211ENST00000449159 TRMT2AQ8IZ69 625 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms