RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 GNAI1P63096 354 aa28.69■■■□□ 2.18
APOE-204ENST00000446996 INTS5Q6P9B9 1019 aaKnown RBP28.69■■■□□ 2.18
APOE-204ENST00000446996 IFT57Q9NWB7 429 aa28.69■■■□□ 2.18
APOE-204ENST00000446996 COL23A1Q86Y22 540 aaPredicted RBP28.68■■■□□ 2.18
APOE-204ENST00000446996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.67■■■□□ 2.18
APOE-204ENST00000446996 IL16Q14005 1332 aa28.67■■■□□ 2.18
APOE-204ENST00000446996 GIGYF1O75420 1035 aaPredicted RBP28.66■■■□□ 2.18
APOE-204ENST00000446996 TRAPPC3LQ5T215 181 aa28.66■■■□□ 2.18
APOE-204ENST00000446996 WDR63Q8IWG1 891 aa28.66■■■□□ 2.18
APOE-204ENST00000446996 PDGFDQ9GZP0 370 aaPredicted RBP28.66■■■□□ 2.18
APOE-204ENST00000446996 MTFR1LQ9H019 292 aa28.66■■■□□ 2.18
APOE-204ENST00000446996 USP16Q9Y5T5 823 aa28.65■■■□□ 2.18
APOE-204ENST00000446996 AMIGO3Q86WK7 504 aa28.64■■■□□ 2.18
APOE-204ENST00000446996 SPON1Q9HCB6 807 aa28.64■■■□□ 2.18
APOE-204ENST00000446996 LAMB4A4D0S4 1761 aa28.63■■■□□ 2.17
APOE-204ENST00000446996 LAS1LQ9Y4W2 734 aaKnown RBP28.63■■■□□ 2.17
APOE-204ENST00000446996 COL24A1Q17RW2 1714 aa28.63■■■□□ 2.17
APOE-204ENST00000446996 ZBTB1Q9Y2K1 713 aa28.62■■■□□ 2.17
APOE-204ENST00000446996 SOS1Q07889 1333 aaPredicted RBP28.62■■■□□ 2.17
APOE-204ENST00000446996 MBIPQ9NS73 344 aa28.61■■■□□ 2.17
APOE-204ENST00000446996 MSH5O43196 834 aa28.6■■■□□ 2.17
APOE-204ENST00000446996 PHF14O94880 888 aa28.6■■■□□ 2.17
APOE-204ENST00000446996 IL6STP40189 918 aaPredicted RBP28.6■■■□□ 2.17
APOE-204ENST00000446996 ARHGEF1Q92888 912 aaKnown RBP28.6■■■□□ 2.17
APOE-204ENST00000446996 PRAMEF22A3QJZ6 481 aa28.59■■■□□ 2.17
APOE-204ENST00000446996 ZBTB7AO95365 584 aa28.59■■■□□ 2.17
APOE-204ENST00000446996 HOXB7P09629 217 aa28.59■■■□□ 2.17
APOE-204ENST00000446996 EIF5P55010 431 aaKnown RBP28.59■■■□□ 2.17
APOE-204ENST00000446996 A0A087WZG4 1122 aa28.57■■■□□ 2.16
APOE-204ENST00000446996 A1BGP04217 495 aa28.57■■■□□ 2.16
APOE-204ENST00000446996 RFC4P35249 363 aa28.57■■■□□ 2.16
APOE-204ENST00000446996 ERBB4Q15303 1308 aa28.57■■■□□ 2.16
APOE-204ENST00000446996 CANXP27824 592 aaKnown RBP28.56■■■□□ 2.16
APOE-204ENST00000446996 SALL2Q9Y467 1007 aaPredicted RBP28.56■■■□□ 2.16
APOE-204ENST00000446996 C4AP0C0L4 1744 aa28.55■■■□□ 2.16
APOE-204ENST00000446996 COL15A1P39059 1388 aa28.55■■■□□ 2.16
APOE-204ENST00000446996 ZNF521Q96K83 1311 aa28.55■■■□□ 2.16
APOE-204ENST00000446996 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
APOE-204ENST00000446996 SGIP1Q9BQI5 828 aa28.55■■■□□ 2.16
APOE-204ENST00000446996 ATF5Q9Y2D1 282 aaPredicted RBP28.55■■■□□ 2.16
APOE-204ENST00000446996 SENP3-EIF4A1A0A087X0R7 540 aa28.54■■■□□ 2.16
APOE-204ENST00000446996 PTGER2P43116 358 aa28.53■■■□□ 2.16
APOE-204ENST00000446996 USP42Q9H9J4 1324 aaKnown RBP28.52■■■□□ 2.16
APOE-204ENST00000446996 NPM2Q86SE8 214 aaKnown RBP28.52■■■□□ 2.16
APOE-204ENST00000446996 NLGN1Q8N2Q7 840 aa28.52■■■□□ 2.16
APOE-204ENST00000446996 CHMP4AQ9BY43 222 aa28.52■■■□□ 2.16
APOE-204ENST00000446996 NARFQ9UHQ1 456 aa28.52■■■□□ 2.16
APOE-204ENST00000446996 POLD1P28340 1107 aa28.51■■■□□ 2.15
APOE-204ENST00000446996 NBPF26B4DH59 902 aa28.5■■■□□ 2.15
APOE-204ENST00000446996 ZPR1O75312 459 aa28.5■■■□□ 2.15
APOE-204ENST00000446996 NBPF10Q6P3W6 841 aaKnown RBP28.5■■■□□ 2.15
APOE-204ENST00000446996 NBPF15Q8N660 670 aa28.5■■■□□ 2.15
APOE-204ENST00000446996 GYS1P13807 737 aa28.49■■■□□ 2.15
APOE-204ENST00000446996 DUSP27Q5VZP5 1158 aa28.49■■■□□ 2.15
APOE-204ENST00000446996 KRT24Q2M2I5 525 aa28.48■■■□□ 2.15
APOE-204ENST00000446996 RGL2O15211 777 aa28.47■■■□□ 2.15
APOE-204ENST00000446996 MYH16Q9H6N6 1097 aa28.47■■■□□ 2.15
APOE-204ENST00000446996 EIF2S2P20042 333 aaKnown RBP28.46■■■□□ 2.15
APOE-204ENST00000446996 GOLGA2Q08379 1002 aa28.45■■■□□ 2.14
APOE-204ENST00000446996 TSR2Q969E8 191 aaKnown RBP28.45■■■□□ 2.14
APOE-204ENST00000446996 USPL1Q5W0Q7 1092 aa28.44■■■□□ 2.14
APOE-204ENST00000446996 C8orf58Q8NAV2 365 aa28.44■■■□□ 2.14
APOE-204ENST00000446996 SRP68Q9UHB9 627 aaKnown RBP28.44■■■□□ 2.14
APOE-204ENST00000446996 FANCIQ9NVI1 1328 aa28.43■■■□□ 2.14
APOE-204ENST00000446996 PDIA6Q15084 440 aa28.43■■■□□ 2.14
APOE-204ENST00000446996 HDGFL1Q5TGJ6 251 aa28.43■■■□□ 2.14
APOE-204ENST00000446996 MSL1Q68DK7 614 aa28.43■■■□□ 2.14
APOE-204ENST00000446996 ARXQ96QS3 562 aa28.43■■■□□ 2.14
APOE-204ENST00000446996 DDX21Q9NR30 783 aaKnown RBP eCLIP28.43■■■□□ 2.14
APOE-204ENST00000446996 PIP4K2AP48426 406 aaPredicted RBP28.42■■■□□ 2.14
APOE-204ENST00000446996 DZIP3Q86Y13 1208 aaKnown RBP28.42■■■□□ 2.14
APOE-204ENST00000446996 SPINK5Q9NQ38 1064 aaPredicted RBP28.42■■■□□ 2.14
APOE-204ENST00000446996 PPP1R1BQ9UD71 204 aaPredicted RBP28.42■■■□□ 2.14
APOE-204ENST00000446996 ZNF330Q9Y3S2 320 aaPredicted RBP28.42■■■□□ 2.14
APOE-204ENST00000446996 BCL2L12Q9HB09 334 aa28.41■■■□□ 2.14
APOE-204ENST00000446996 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
APOE-204ENST00000446996 SCN7AQ01118 1682 aa28.4■■■□□ 2.14
APOE-204ENST00000446996 E9PSI1 815 aa28.4■■■□□ 2.14
APOE-204ENST00000446996 CAMTA2O94983 1202 aa28.4■■■□□ 2.14
APOE-204ENST00000446996 CLEC4GQ6UXB4 293 aa28.4■■■□□ 2.14
APOE-204ENST00000446996 LRP10Q7Z4F1 713 aa28.4■■■□□ 2.14
APOE-204ENST00000446996 DBF4Q9UBU7 674 aaPredicted RBP28.4■■■□□ 2.14
APOE-204ENST00000446996 BCORQ6W2J9 1755 aa28.39■■■□□ 2.14
APOE-204ENST00000446996 TM4SF1P30408 202 aa28.39■■■□□ 2.14
APOE-204ENST00000446996 FKBP8Q14318 412 aa28.39■■■□□ 2.14
APOE-204ENST00000446996 ERVV-1B6SEH8 477 aa28.38■■■□□ 2.13
APOE-204ENST00000446996 ELL2O00472 640 aaPredicted RBP28.38■■■□□ 2.13
APOE-204ENST00000446996 MYL6BP14649 208 aa28.38■■■□□ 2.13
APOE-204ENST00000446996 TWISTNBQ3B726 338 aaPredicted RBP28.38■■■□□ 2.13
APOE-204ENST00000446996 MMP10P09238 476 aa28.37■■■□□ 2.13
APOE-204ENST00000446996 CCDC30Q5VVM6 783 aa28.37■■■□□ 2.13
APOE-204ENST00000446996 TSPYL6Q8N831 410 aa28.37■■■□□ 2.13
APOE-204ENST00000446996 SLFN5Q08AF3 891 aa28.36■■■□□ 2.13
APOE-204ENST00000446996 ZNF652Q9Y2D9 606 aa28.36■■■□□ 2.13
APOE-204ENST00000446996 CACNA1FO60840 1977 aa28.35■■■□□ 2.13
APOE-204ENST00000446996 NECTIN2Q92692 538 aa28.35■■■□□ 2.13
APOE-204ENST00000446996 HYPKQ9NX55 129 aa28.35■■■□□ 2.13
APOE-204ENST00000446996 CHPF2Q9P2E5 772 aa28.35■■■□□ 2.13
APOE-204ENST00000446996 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
APOE-204ENST00000446996 PROSER3Q2NL68 480 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms