RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 IL16Q14005 1332 aa23.75■■□□□ 1.39
PHTF1-207ENST00000446739 RPS6KA4O75676 772 aa23.74■■□□□ 1.39
PHTF1-207ENST00000446739 WDR63Q8IWG1 891 aa23.74■■□□□ 1.39
PHTF1-207ENST00000446739 RTCBQ9Y3I0 505 aaKnown RBP23.74■■□□□ 1.39
PHTF1-207ENST00000446739 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
PHTF1-207ENST00000446739 INTS5Q6P9B9 1019 aaKnown RBP23.73■■□□□ 1.39
PHTF1-207ENST00000446739 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
PHTF1-207ENST00000446739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.71■■□□□ 1.39
PHTF1-207ENST00000446739 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
PHTF1-207ENST00000446739 ADRA2BP18089 450 aa23.71■■□□□ 1.39
PHTF1-207ENST00000446739 COL23A1Q86Y22 540 aaPredicted RBP23.71■■□□□ 1.39
PHTF1-207ENST00000446739 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
PHTF1-207ENST00000446739 C4AP0C0L4 1744 aa23.7■■□□□ 1.39
PHTF1-207ENST00000446739 PHF14O94880 888 aa23.7■■□□□ 1.38
PHTF1-207ENST00000446739 AMIGO3Q86WK7 504 aa23.7■■□□□ 1.38
PHTF1-207ENST00000446739 SLC16A10Q8TF71 515 aa23.7■■□□□ 1.38
PHTF1-207ENST00000446739 PDGFDQ9GZP0 370 aaPredicted RBP23.7■■□□□ 1.38
PHTF1-207ENST00000446739 ZBTB1Q9Y2K1 713 aa23.7■■□□□ 1.38
PHTF1-207ENST00000446739 SOS1Q07889 1333 aaPredicted RBP23.68■■□□□ 1.38
PHTF1-207ENST00000446739 ZNF521Q96K83 1311 aa23.68■■□□□ 1.38
PHTF1-207ENST00000446739 MSH5O43196 834 aa23.68■■□□□ 1.38
PHTF1-207ENST00000446739 TRAPPC3LQ5T215 181 aa23.68■■□□□ 1.38
PHTF1-207ENST00000446739 SMIM5Q71RC9 77 aa23.67■■□□□ 1.38
PHTF1-207ENST00000446739 COL24A1Q17RW2 1714 aa23.67■■□□□ 1.38
PHTF1-207ENST00000446739 A1BGP04217 495 aa23.66■■□□□ 1.38
PHTF1-207ENST00000446739 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
PHTF1-207ENST00000446739 ARHGEF1Q92888 912 aaKnown RBP23.66■■□□□ 1.38
PHTF1-207ENST00000446739 MTFR1LQ9H019 292 aa23.66■■□□□ 1.38
PHTF1-207ENST00000446739 HOXB7P09629 217 aa23.65■■□□□ 1.38
PHTF1-207ENST00000446739 LRP5O75197 1615 aa23.64■■□□□ 1.38
PHTF1-207ENST00000446739 ZBTB7AO95365 584 aa23.64■■□□□ 1.37
PHTF1-207ENST00000446739 IL6STP40189 918 aaPredicted RBP23.64■■□□□ 1.37
PHTF1-207ENST00000446739 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.37
PHTF1-207ENST00000446739 KRT24Q2M2I5 525 aa23.64■■□□□ 1.37
PHTF1-207ENST00000446739 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.37
PHTF1-207ENST00000446739 COL15A1P39059 1388 aa23.64■■□□□ 1.37
PHTF1-207ENST00000446739 ERBB4Q15303 1308 aa23.63■■□□□ 1.37
PHTF1-207ENST00000446739 RFC4P35249 363 aa23.63■■□□□ 1.37
PHTF1-207ENST00000446739 SPON1Q9HCB6 807 aa23.63■■□□□ 1.37
PHTF1-207ENST00000446739 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
PHTF1-207ENST00000446739 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
PHTF1-207ENST00000446739 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
PHTF1-207ENST00000446739 A0A087WZG4 1122 aa23.61■■□□□ 1.37
PHTF1-207ENST00000446739 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
PHTF1-207ENST00000446739 DUSP27Q5VZP5 1158 aa23.61■■□□□ 1.37
PHTF1-207ENST00000446739 EIF2S2P20042 333 aaKnown RBP23.6■■□□□ 1.37
PHTF1-207ENST00000446739 ATF5Q9Y2D1 282 aaPredicted RBP23.6■■□□□ 1.37
PHTF1-207ENST00000446739 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
PHTF1-207ENST00000446739 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
PHTF1-207ENST00000446739 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
PHTF1-207ENST00000446739 SPINK5Q9NQ38 1064 aaPredicted RBP23.59■■□□□ 1.37
PHTF1-207ENST00000446739 ZNF330Q9Y3S2 320 aaPredicted RBP23.59■■□□□ 1.37
PHTF1-207ENST00000446739 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
PHTF1-207ENST00000446739 CACNA1FO60840 1977 aa23.58■■□□□ 1.37
PHTF1-207ENST00000446739 PIP4K2AP48426 406 aaPredicted RBP23.58■■□□□ 1.37
PHTF1-207ENST00000446739 C8orf58Q8NAV2 365 aa23.58■■□□□ 1.37
PHTF1-207ENST00000446739 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
PHTF1-207ENST00000446739 BCORQ6W2J9 1755 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 SCN7AQ01118 1682 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 E9PSI1 815 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 ZPR1O75312 459 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
PHTF1-207ENST00000446739 HDGFL1Q5TGJ6 251 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 NARFQ9UHQ1 456 aa23.57■■□□□ 1.36
PHTF1-207ENST00000446739 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
PHTF1-207ENST00000446739 ELL2O00472 640 aaPredicted RBP23.56■■□□□ 1.36
PHTF1-207ENST00000446739 GYS1P13807 737 aa23.56■■□□□ 1.36
PHTF1-207ENST00000446739 SRP68Q9UHB9 627 aaKnown RBP23.56■■□□□ 1.36
PHTF1-207ENST00000446739 POLD1P28340 1107 aa23.55■■□□□ 1.36
PHTF1-207ENST00000446739 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
PHTF1-207ENST00000446739 NLGN1Q8N2Q7 840 aa23.55■■□□□ 1.36
PHTF1-207ENST00000446739 NECTIN2Q92692 538 aa23.55■■□□□ 1.36
PHTF1-207ENST00000446739 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
PHTF1-207ENST00000446739 MYL6BP14649 208 aa23.54■■□□□ 1.36
PHTF1-207ENST00000446739 PTGER2P43116 358 aa23.54■■□□□ 1.36
PHTF1-207ENST00000446739 PDIA6Q15084 440 aa23.54■■□□□ 1.36
PHTF1-207ENST00000446739 USPL1Q5W0Q7 1092 aa23.54■■□□□ 1.36
PHTF1-207ENST00000446739 DZIP3Q86Y13 1208 aaKnown RBP23.54■■□□□ 1.36
PHTF1-207ENST00000446739 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
PHTF1-207ENST00000446739 DDX21Q9NR30 783 aaKnown RBP eCLIP23.54■■□□□ 1.36
PHTF1-207ENST00000446739 SLFN5Q08AF3 891 aa23.53■■□□□ 1.36
PHTF1-207ENST00000446739 TWISTNBQ3B726 338 aaPredicted RBP23.53■■□□□ 1.36
PHTF1-207ENST00000446739 DBF4Q9UBU7 674 aaPredicted RBP23.53■■□□□ 1.36
PHTF1-207ENST00000446739 TBC1D2BQ9UPU7 963 aa23.53■■□□□ 1.36
PHTF1-207ENST00000446739 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
PHTF1-207ENST00000446739 ARXQ96QS3 562 aa23.52■■□□□ 1.36
PHTF1-207ENST00000446739 NUP98P52948 1817 aa23.52■■□□□ 1.36
PHTF1-207ENST00000446739 CCDC30Q5VVM6 783 aa23.51■■□□□ 1.35
PHTF1-207ENST00000446739 CHPF2Q9P2E5 772 aa23.51■■□□□ 1.35
PHTF1-207ENST00000446739 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
PHTF1-207ENST00000446739 PROSER3Q2NL68 480 aa23.5■■□□□ 1.35
PHTF1-207ENST00000446739 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
PHTF1-207ENST00000446739 RGL2O15211 777 aa23.49■■□□□ 1.35
PHTF1-207ENST00000446739 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PHTF1-207ENST00000446739 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
PHTF1-207ENST00000446739 BCL2L12Q9HB09 334 aa23.49■■□□□ 1.35
PHTF1-207ENST00000446739 ANXA1P04083 346 aa23.48■■□□□ 1.35
PHTF1-207ENST00000446739 TRMT2AQ8IZ69 625 aaKnown RBP23.48■■□□□ 1.35
PHTF1-207ENST00000446739 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
PHTF1-207ENST00000446739 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms