RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ADRA2BP18089 450 aa17.85■□□□□ 0.45
GARNL3-208ENST00000444677 RFC4P35249 363 aa17.85■□□□□ 0.45
GARNL3-208ENST00000444677 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
GARNL3-208ENST00000444677 CHD4Q14839 1912 aa17.85■□□□□ 0.45
GARNL3-208ENST00000444677 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
GARNL3-208ENST00000444677 TJP1Q07157 1748 aa17.84■□□□□ 0.45
GARNL3-208ENST00000444677 ZNF831Q5JPB2 1677 aa17.83■□□□□ 0.45
GARNL3-208ENST00000444677 STARD3NLO95772 234 aa17.83■□□□□ 0.44
GARNL3-208ENST00000444677 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
GARNL3-208ENST00000444677 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.44
GARNL3-208ENST00000444677 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.44
GARNL3-208ENST00000444677 MMP10P09238 476 aa17.82■□□□□ 0.44
GARNL3-208ENST00000444677 TEX13AQ9BXU3 409 aaPredicted RBP17.82■□□□□ 0.44
GARNL3-208ENST00000444677 APAF1O14727 1248 aa17.81■□□□□ 0.44
GARNL3-208ENST00000444677 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
GARNL3-208ENST00000444677 EIF4A1P60842 406 aaKnown RBP17.81■□□□□ 0.44
GARNL3-208ENST00000444677 FKBP8Q14318 412 aa17.81■□□□□ 0.44
GARNL3-208ENST00000444677 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
GARNL3-208ENST00000444677 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
GARNL3-208ENST00000444677 USP42Q9H9J4 1324 aaKnown RBP17.8■□□□□ 0.44
GARNL3-208ENST00000444677 YY1P25490 414 aa17.8■□□□□ 0.44
GARNL3-208ENST00000444677 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
GARNL3-208ENST00000444677 NLGN1Q8N2Q7 840 aa17.8■□□□□ 0.44
GARNL3-208ENST00000444677 PNISRQ8TF01 805 aaKnown RBP17.8■□□□□ 0.44
GARNL3-208ENST00000444677 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
GARNL3-208ENST00000444677 C4AP0C0L4 1744 aa17.8■□□□□ 0.44
GARNL3-208ENST00000444677 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
GARNL3-208ENST00000444677 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
GARNL3-208ENST00000444677 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
GARNL3-208ENST00000444677 COL15A1P39059 1388 aa17.79■□□□□ 0.44
GARNL3-208ENST00000444677 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
GARNL3-208ENST00000444677 SIPA1L3O60292 1781 aaPredicted RBP17.78■□□□□ 0.44
GARNL3-208ENST00000444677 CICQ96RK0 1608 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-208ENST00000444677 NBPF26B4DH59 902 aa17.77■□□□□ 0.44
GARNL3-208ENST00000444677 ZPR1O75312 459 aa17.77■□□□□ 0.44
GARNL3-208ENST00000444677 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-208ENST00000444677 NBPF10Q6P3W6 841 aaKnown RBP17.77■□□□□ 0.44
GARNL3-208ENST00000444677 NBPF15Q8N660 670 aa17.77■□□□□ 0.44
GARNL3-208ENST00000444677 NARFQ9UHQ1 456 aa17.77■□□□□ 0.44
GARNL3-208ENST00000444677 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.44
GARNL3-208ENST00000444677 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.44
GARNL3-208ENST00000444677 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
GARNL3-208ENST00000444677 DDR1Q08345 913 aa17.76■□□□□ 0.43
GARNL3-208ENST00000444677 TM4SF1P30408 202 aa17.75■□□□□ 0.43
GARNL3-208ENST00000444677 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
GARNL3-208ENST00000444677 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
GARNL3-208ENST00000444677 CHL1O00533 1208 aa17.74■□□□□ 0.43
GARNL3-208ENST00000444677 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
GARNL3-208ENST00000444677 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
GARNL3-208ENST00000444677 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
GARNL3-208ENST00000444677 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
GARNL3-208ENST00000444677 A0A087WZG4 1122 aa17.73■□□□□ 0.43
GARNL3-208ENST00000444677 NFIXQ14938 502 aa17.73■□□□□ 0.43
GARNL3-208ENST00000444677 POLRMTO00411 1230 aaKnown RBP17.72■□□□□ 0.43
GARNL3-208ENST00000444677 CAMTA2O94983 1202 aa17.72■□□□□ 0.43
GARNL3-208ENST00000444677 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
GARNL3-208ENST00000444677 GPR162Q16538 588 aa17.71■□□□□ 0.43
GARNL3-208ENST00000444677 DZIP3Q86Y13 1208 aaKnown RBP17.71■□□□□ 0.43
GARNL3-208ENST00000444677 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
GARNL3-208ENST00000444677 BABAM1Q9NWV8 329 aa17.71■□□□□ 0.43
GARNL3-208ENST00000444677 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
GARNL3-208ENST00000444677 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
GARNL3-208ENST00000444677 TBC1D9BQ66K14 1250 aa17.7■□□□□ 0.42
GARNL3-208ENST00000444677 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
GARNL3-208ENST00000444677 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
GARNL3-208ENST00000444677 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
GARNL3-208ENST00000444677 KIF13BQ9NQT8 1826 aa17.69■□□□□ 0.42
GARNL3-208ENST00000444677 UTRNP46939 3433 aa17.69■□□□□ 0.42
GARNL3-208ENST00000444677 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 ANXA1P04083 346 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 SERPINB2P05120 415 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 MYL6BP14649 208 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
GARNL3-208ENST00000444677 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
GARNL3-208ENST00000444677 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
GARNL3-208ENST00000444677 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
GARNL3-208ENST00000444677 PDIA6Q15084 440 aa17.67■□□□□ 0.42
GARNL3-208ENST00000444677 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
GARNL3-208ENST00000444677 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
GARNL3-208ENST00000444677 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
GARNL3-208ENST00000444677 DPEP1P16444 411 aa17.66■□□□□ 0.42
GARNL3-208ENST00000444677 HLFQ16534 295 aa17.66■□□□□ 0.42
GARNL3-208ENST00000444677 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
GARNL3-208ENST00000444677 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
GARNL3-208ENST00000444677 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
GARNL3-208ENST00000444677 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
GARNL3-208ENST00000444677 CHRNA5P30532 468 aa17.64■□□□□ 0.41
GARNL3-208ENST00000444677 TGFB2P61812 414 aa17.64■□□□□ 0.41
GARNL3-208ENST00000444677 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
GARNL3-208ENST00000444677 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
GARNL3-208ENST00000444677 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
GARNL3-208ENST00000444677 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
GARNL3-208ENST00000444677 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
GARNL3-208ENST00000444677 KCNA3P22001 575 aa17.63■□□□□ 0.41
GARNL3-208ENST00000444677 GNAI1P63096 354 aa17.63■□□□□ 0.41
GARNL3-208ENST00000444677 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
GARNL3-208ENST00000444677 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
GARNL3-208ENST00000444677 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms