RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PTGER2P43116 358 aa22.85■■□□□ 1.25
SMARCAL1-209ENST00000444508 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
SMARCAL1-209ENST00000444508 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
SMARCAL1-209ENST00000444508 TSPYL4Q9UJ04 414 aa22.85■■□□□ 1.25
SMARCAL1-209ENST00000444508 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
SMARCAL1-209ENST00000444508 RFC4P35249 363 aa22.83■■□□□ 1.25
SMARCAL1-209ENST00000444508 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
SMARCAL1-209ENST00000444508 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
SMARCAL1-209ENST00000444508 ZBTB1Q9Y2K1 713 aa22.82■■□□□ 1.24
SMARCAL1-209ENST00000444508 COL24A1Q17RW2 1714 aa22.82■■□□□ 1.24
SMARCAL1-209ENST00000444508 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 EIF4A1P60842 406 aaKnown RBP22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 SGIP1Q9BQI5 828 aa22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
SMARCAL1-209ENST00000444508 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
SMARCAL1-209ENST00000444508 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
SMARCAL1-209ENST00000444508 ARXQ96QS3 562 aa22.79■■□□□ 1.24
SMARCAL1-209ENST00000444508 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
SMARCAL1-209ENST00000444508 COL15A1P39059 1388 aa22.78■■□□□ 1.24
SMARCAL1-209ENST00000444508 PRAMEF22A3QJZ6 481 aa22.78■■□□□ 1.24
SMARCAL1-209ENST00000444508 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
SMARCAL1-209ENST00000444508 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
SMARCAL1-209ENST00000444508 CHL1O00533 1208 aa22.77■■□□□ 1.24
SMARCAL1-209ENST00000444508 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
SMARCAL1-209ENST00000444508 A0A087WZG4 1122 aa22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 SENP3-EIF4A1A0A087X0R7 540 aa22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 ZPR1O75312 459 aa22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 GIGYF1O75420 1035 aaPredicted RBP22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 A1BGP04217 495 aa22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 ZNF330Q9Y3S2 320 aaPredicted RBP22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
SMARCAL1-209ENST00000444508 IL6STP40189 918 aaPredicted RBP22.75■■□□□ 1.23
SMARCAL1-209ENST00000444508 NCBP3Q53F19 620 aaKnown RBP22.75■■□□□ 1.23
SMARCAL1-209ENST00000444508 NLGN1Q8N2Q7 840 aa22.75■■□□□ 1.23
SMARCAL1-209ENST00000444508 GYS1P13807 737 aa22.74■■□□□ 1.23
SMARCAL1-209ENST00000444508 EIF5P55010 431 aaKnown RBP22.74■■□□□ 1.23
SMARCAL1-209ENST00000444508 GNAI1P63096 354 aa22.74■■□□□ 1.23
SMARCAL1-209ENST00000444508 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
SMARCAL1-209ENST00000444508 SRP68Q9UHB9 627 aaKnown RBP22.74■■□□□ 1.23
SMARCAL1-209ENST00000444508 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
SMARCAL1-209ENST00000444508 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
SMARCAL1-209ENST00000444508 USPL1Q5W0Q7 1092 aa22.71■■□□□ 1.23
SMARCAL1-209ENST00000444508 KLHL34Q8N239 644 aa22.71■■□□□ 1.23
SMARCAL1-209ENST00000444508 FHDC1Q9C0D6 1143 aaPredicted RBP22.71■■□□□ 1.23
SMARCAL1-209ENST00000444508 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
SMARCAL1-209ENST00000444508 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
SMARCAL1-209ENST00000444508 MMP10P09238 476 aa22.7■■□□□ 1.22
SMARCAL1-209ENST00000444508 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
SMARCAL1-209ENST00000444508 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
SMARCAL1-209ENST00000444508 NGEFQ8N5V2 710 aa22.7■■□□□ 1.22
SMARCAL1-209ENST00000444508 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
SMARCAL1-209ENST00000444508 FKBP8Q14318 412 aa22.68■■□□□ 1.22
SMARCAL1-209ENST00000444508 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
SMARCAL1-209ENST00000444508 MIER1Q8N108 512 aa22.68■■□□□ 1.22
SMARCAL1-209ENST00000444508 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
SMARCAL1-209ENST00000444508 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
SMARCAL1-209ENST00000444508 EIF2S2P20042 333 aaKnown RBP22.67■■□□□ 1.22
SMARCAL1-209ENST00000444508 TBC1D2BQ9UPU7 963 aa22.67■■□□□ 1.22
SMARCAL1-209ENST00000444508 IL16Q14005 1332 aa22.66■■□□□ 1.22
SMARCAL1-209ENST00000444508 DZIP3Q86Y13 1208 aaKnown RBP22.66■■□□□ 1.22
SMARCAL1-209ENST00000444508 SYT17Q9BSW7 474 aa22.66■■□□□ 1.22
SMARCAL1-209ENST00000444508 PARP3Q9Y6F1 533 aa22.66■■□□□ 1.22
SMARCAL1-209ENST00000444508 SCN7AQ01118 1682 aa22.65■■□□□ 1.22
SMARCAL1-209ENST00000444508 HOXB7P09629 217 aa22.65■■□□□ 1.22
SMARCAL1-209ENST00000444508 KRT24Q2M2I5 525 aa22.65■■□□□ 1.22
SMARCAL1-209ENST00000444508 MYL6BP14649 208 aa22.64■■□□□ 1.21
SMARCAL1-209ENST00000444508 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
SMARCAL1-209ENST00000444508 BCL2L12Q9HB09 334 aa22.63■■□□□ 1.21
SMARCAL1-209ENST00000444508 CAMTA2O94983 1202 aa22.62■■□□□ 1.21
SMARCAL1-209ENST00000444508 DUSP27Q5VZP5 1158 aa22.62■■□□□ 1.21
SMARCAL1-209ENST00000444508 NECTIN2Q92692 538 aa22.62■■□□□ 1.21
SMARCAL1-209ENST00000444508 CD2APQ9Y5K6 639 aa22.62■■□□□ 1.21
SMARCAL1-209ENST00000444508 BCORQ6W2J9 1755 aa22.62■■□□□ 1.21
SMARCAL1-209ENST00000444508 TM4SF1P30408 202 aa22.61■■□□□ 1.21
SMARCAL1-209ENST00000444508 HDGFL1Q5TGJ6 251 aa22.61■■□□□ 1.21
SMARCAL1-209ENST00000444508 TSR2Q969E8 191 aaKnown RBP22.61■■□□□ 1.21
SMARCAL1-209ENST00000444508 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
SMARCAL1-209ENST00000444508 DDR1Q08345 913 aa22.6■■□□□ 1.21
SMARCAL1-209ENST00000444508 NFIXQ14938 502 aa22.6■■□□□ 1.21
SMARCAL1-209ENST00000444508 KIF6Q6ZMV9 814 aa22.6■■□□□ 1.21
SMARCAL1-209ENST00000444508 DCAF8L1A6NGE4 600 aa22.59■■□□□ 1.21
SMARCAL1-209ENST00000444508 BICDL1Q6ZP65 573 aa22.59■■□□□ 1.21
SMARCAL1-209ENST00000444508 POLRMTO00411 1230 aaKnown RBP22.58■■□□□ 1.21
SMARCAL1-209ENST00000444508 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.21
SMARCAL1-209ENST00000444508 PDIA6Q15084 440 aa22.58■■□□□ 1.21
SMARCAL1-209ENST00000444508 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.21
SMARCAL1-209ENST00000444508 CHMP4AQ9BY43 222 aa22.58■■□□□ 1.21
SMARCAL1-209ENST00000444508 RGL2O15211 777 aa22.57■■□□□ 1.2
SMARCAL1-209ENST00000444508 TBC1D9BQ66K14 1250 aa22.57■■□□□ 1.2
SMARCAL1-209ENST00000444508 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
SMARCAL1-209ENST00000444508 NLGN2Q8NFZ4 835 aa22.57■■□□□ 1.2
SMARCAL1-209ENST00000444508 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMARCAL1-209ENST00000444508 ANXA1P04083 346 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 PROSER3Q2NL68 480 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 CHPF2Q9P2E5 772 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms