RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
AP1S3-207ENST00000444408 ZBTB1Q9Y2K1 713 aa22.42■■□□□ 1.18
AP1S3-207ENST00000444408 RPS6KA4O75676 772 aa22.41■■□□□ 1.18
AP1S3-207ENST00000444408 A1BGP04217 495 aa22.41■■□□□ 1.18
AP1S3-207ENST00000444408 SNRPA1P09661 255 aaKnown RBP22.41■■□□□ 1.18
AP1S3-207ENST00000444408 ZNF853P0CG23 659 aa22.41■■□□□ 1.18
AP1S3-207ENST00000444408 PTGER2P43116 358 aa22.41■■□□□ 1.18
AP1S3-207ENST00000444408 PIP4K2AP48426 406 aaPredicted RBP22.41■■□□□ 1.18
AP1S3-207ENST00000444408 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
AP1S3-207ENST00000444408 ATF5Q9Y2D1 282 aaPredicted RBP22.41■■□□□ 1.18
AP1S3-207ENST00000444408 QSER1Q2KHR3 1735 aa22.4■■□□□ 1.18
AP1S3-207ENST00000444408 CFAP44Q96MT7 982 aa22.4■■□□□ 1.18
AP1S3-207ENST00000444408 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
AP1S3-207ENST00000444408 RTCBQ9Y3I0 505 aaKnown RBP22.4■■□□□ 1.18
AP1S3-207ENST00000444408 GIGYF1O75420 1035 aaPredicted RBP22.39■■□□□ 1.17
AP1S3-207ENST00000444408 STARD3NLO95772 234 aa22.39■■□□□ 1.17
AP1S3-207ENST00000444408 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
AP1S3-207ENST00000444408 SSFA2P28290 1259 aa22.39■■□□□ 1.17
AP1S3-207ENST00000444408 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.17
AP1S3-207ENST00000444408 HMGB2P26583 209 aaKnown RBP22.38■■□□□ 1.17
AP1S3-207ENST00000444408 MSL1Q68DK7 614 aa22.38■■□□□ 1.17
AP1S3-207ENST00000444408 ARHGEF1Q92888 912 aaKnown RBP22.38■■□□□ 1.17
AP1S3-207ENST00000444408 TEX13AQ9BXU3 409 aaPredicted RBP22.38■■□□□ 1.17
AP1S3-207ENST00000444408 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
AP1S3-207ENST00000444408 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
AP1S3-207ENST00000444408 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
AP1S3-207ENST00000444408 TRAPPC3LQ5T215 181 aa22.36■■□□□ 1.17
AP1S3-207ENST00000444408 FLAD1Q8NFF5 587 aa22.36■■□□□ 1.17
AP1S3-207ENST00000444408 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
AP1S3-207ENST00000444408 MTFR1LQ9H019 292 aa22.36■■□□□ 1.17
AP1S3-207ENST00000444408 GNAI1P63096 354 aa22.35■■□□□ 1.17
AP1S3-207ENST00000444408 CALD1Q05682 793 aaKnown RBP22.35■■□□□ 1.17
AP1S3-207ENST00000444408 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
AP1S3-207ENST00000444408 SRP68Q9UHB9 627 aaKnown RBP22.35■■□□□ 1.17
AP1S3-207ENST00000444408 NBPF26B4DH59 902 aa22.34■■□□□ 1.17
AP1S3-207ENST00000444408 NBPF10Q6P3W6 841 aaKnown RBP22.34■■□□□ 1.17
AP1S3-207ENST00000444408 NBPF15Q8N660 670 aa22.34■■□□□ 1.17
AP1S3-207ENST00000444408 SYT17Q9BSW7 474 aa22.33■■□□□ 1.17
AP1S3-207ENST00000444408 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.17
AP1S3-207ENST00000444408 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
AP1S3-207ENST00000444408 EIF5P55010 431 aaKnown RBP22.32■■□□□ 1.16
AP1S3-207ENST00000444408 SLC16A10Q8TF71 515 aa22.32■■□□□ 1.16
AP1S3-207ENST00000444408 NECTIN2Q92692 538 aa22.32■■□□□ 1.16
AP1S3-207ENST00000444408 SGIP1Q9BQI5 828 aa22.32■■□□□ 1.16
AP1S3-207ENST00000444408 ZNF521Q96K83 1311 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 COL15A1P39059 1388 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 ELL2O00472 640 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-207ENST00000444408 ADRA2BP18089 450 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
AP1S3-207ENST00000444408 RFC4P35249 363 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 C4AP0C0L4 1744 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 IL16Q14005 1332 aa22.31■■□□□ 1.16
AP1S3-207ENST00000444408 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
AP1S3-207ENST00000444408 ZNF784Q8NCA9 323 aaPredicted RBP22.3■■□□□ 1.16
AP1S3-207ENST00000444408 GYS1P13807 737 aa22.29■■□□□ 1.16
AP1S3-207ENST00000444408 DUSP27Q5VZP5 1158 aa22.29■■□□□ 1.16
AP1S3-207ENST00000444408 ANXA1P04083 346 aa22.28■■□□□ 1.16
AP1S3-207ENST00000444408 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
AP1S3-207ENST00000444408 NGEFQ8N5V2 710 aa22.28■■□□□ 1.16
AP1S3-207ENST00000444408 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
AP1S3-207ENST00000444408 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
AP1S3-207ENST00000444408 USP42Q9H9J4 1324 aaKnown RBP22.28■■□□□ 1.16
AP1S3-207ENST00000444408 FANCIQ9NVI1 1328 aa22.28■■□□□ 1.16
AP1S3-207ENST00000444408 UTRNP46939 3433 aa22.27■■□□□ 1.16
AP1S3-207ENST00000444408 PROSER3Q2NL68 480 aa22.27■■□□□ 1.16
AP1S3-207ENST00000444408 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
AP1S3-207ENST00000444408 CHD4Q14839 1912 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 MYL6BP14649 208 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 FKBP8Q14318 412 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 PDIA6Q15084 440 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 ARXQ96QS3 562 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 BCL2L12Q9HB09 334 aa22.26■■□□□ 1.15
AP1S3-207ENST00000444408 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
AP1S3-207ENST00000444408 COL24A1Q17RW2 1714 aa22.23■■□□□ 1.15
AP1S3-207ENST00000444408 ZPR1O75312 459 aa22.23■■□□□ 1.15
AP1S3-207ENST00000444408 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
AP1S3-207ENST00000444408 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
AP1S3-207ENST00000444408 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
AP1S3-207ENST00000444408 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
AP1S3-207ENST00000444408 EXOSC9Q06265 439 aaKnown RBP22.22■■□□□ 1.15
AP1S3-207ENST00000444408 TTLL7Q6ZT98 887 aa22.22■■□□□ 1.15
AP1S3-207ENST00000444408 CHPF2Q9P2E5 772 aa22.22■■□□□ 1.15
AP1S3-207ENST00000444408 A0A087WZG4 1122 aa22.21■■□□□ 1.15
AP1S3-207ENST00000444408 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
AP1S3-207ENST00000444408 MMP10P09238 476 aa22.21■■□□□ 1.15
AP1S3-207ENST00000444408 POLD1P28340 1107 aa22.21■■□□□ 1.15
AP1S3-207ENST00000444408 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
AP1S3-207ENST00000444408 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.14
AP1S3-207ENST00000444408 HOXB7P09629 217 aa22.2■■□□□ 1.14
AP1S3-207ENST00000444408 GOLGA2Q08379 1002 aa22.2■■□□□ 1.14
AP1S3-207ENST00000444408 NLGN1Q8N2Q7 840 aa22.2■■□□□ 1.14
AP1S3-207ENST00000444408 DDR1Q08345 913 aa22.19■■□□□ 1.14
AP1S3-207ENST00000444408 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
AP1S3-207ENST00000444408 SLFN5Q08AF3 891 aa22.18■■□□□ 1.14
AP1S3-207ENST00000444408 TWISTNBQ3B726 338 aaPredicted RBP22.18■■□□□ 1.14
AP1S3-207ENST00000444408 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
AP1S3-207ENST00000444408 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
AP1S3-207ENST00000444408 DDX21Q9NR30 783 aaKnown RBP eCLIP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms