RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 DCTN1Q14203 1278 aa13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 COL23A1Q86Y22 540 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
HLA-DQB1-206ENST00000443574 CAPN15O75808 1086 aa13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 STARD3NLO95772 234 aa13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
HLA-DQB1-206ENST00000443574 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
HLA-DQB1-206ENST00000443574 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-206ENST00000443574 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-206ENST00000443574 BCORQ6W2J9 1755 aa13.57□□□□□ -0.24
HLA-DQB1-206ENST00000443574 RFC4P35249 363 aa13.56□□□□□ -0.24
HLA-DQB1-206ENST00000443574 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
HLA-DQB1-206ENST00000443574 COL15A1P39059 1388 aa13.56□□□□□ -0.24
HLA-DQB1-206ENST00000443574 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 PTGER2P43116 358 aa13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 ARXQ96QS3 562 aa13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-206ENST00000443574 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-206ENST00000443574 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
HLA-DQB1-206ENST00000443574 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
HLA-DQB1-206ENST00000443574 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
HLA-DQB1-206ENST00000443574 A0A087WZG4 1122 aa13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 APAF1O14727 1248 aa13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ZPR1O75312 459 aa13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 USP42Q9H9J4 1324 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
HLA-DQB1-206ENST00000443574 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-206ENST00000443574 KCNQ3O43525 872 aa13.5□□□□□ -0.25
HLA-DQB1-206ENST00000443574 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-206ENST00000443574 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-206ENST00000443574 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-206ENST00000443574 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
HLA-DQB1-206ENST00000443574 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
HLA-DQB1-206ENST00000443574 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
HLA-DQB1-206ENST00000443574 GYS1P13807 737 aa13.48□□□□□ -0.25
HLA-DQB1-206ENST00000443574 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-206ENST00000443574 NARFQ9UHQ1 456 aa13.48□□□□□ -0.25
HLA-DQB1-206ENST00000443574 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
HLA-DQB1-206ENST00000443574 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 MMP10P09238 476 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 GNAI1P63096 354 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 NUP98P52948 1817 aa13.47□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 CHD4Q14839 1912 aa13.46□□□□□ -0.25
HLA-DQB1-206ENST00000443574 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CHL1O00533 1208 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 A1BGP04217 495 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
HLA-DQB1-206ENST00000443574 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 HOXB7P09629 217 aa13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
HLA-DQB1-206ENST00000443574 RGL2O15211 777 aa13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 DSG3P32926 999 aa13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 FKBP8Q14318 412 aa13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
HLA-DQB1-206ENST00000443574 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
HLA-DQB1-206ENST00000443574 IL16Q14005 1332 aa13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms