RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 ZNF853P0CG23 659 aa22.04■■□□□ 1.12
TARDBP-203ENST00000439080 GNAI1P63096 354 aa22.04■■□□□ 1.12
TARDBP-203ENST00000439080 TEX13AQ9BXU3 409 aaPredicted RBP22.04■■□□□ 1.12
TARDBP-203ENST00000439080 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
TARDBP-203ENST00000439080 STARD3NLO95772 234 aa22.03■■□□□ 1.12
TARDBP-203ENST00000439080 CCDC87Q9NVE4 849 aa22.03■■□□□ 1.12
TARDBP-203ENST00000439080 SCN7AQ01118 1682 aa22.03■■□□□ 1.12
TARDBP-203ENST00000439080 SSFA2P28290 1259 aa22.02■■□□□ 1.12
TARDBP-203ENST00000439080 INTS5Q6P9B9 1019 aaKnown RBP22.02■■□□□ 1.12
TARDBP-203ENST00000439080 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
TARDBP-203ENST00000439080 IL16Q14005 1332 aa22.02■■□□□ 1.12
TARDBP-203ENST00000439080 SRCAPQ6ZRS2 3230 aa22.02■■□□□ 1.12
TARDBP-203ENST00000439080 BCORQ6W2J9 1755 aa22.01■■□□□ 1.11
TARDBP-203ENST00000439080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.01■■□□□ 1.11
TARDBP-203ENST00000439080 GIGYF1O75420 1035 aaPredicted RBP22.01■■□□□ 1.11
TARDBP-203ENST00000439080 SMIM5Q71RC9 77 aa22.01■■□□□ 1.11
TARDBP-203ENST00000439080 RTCBQ9Y3I0 505 aaKnown RBP22.01■■□□□ 1.11
TARDBP-203ENST00000439080 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
TARDBP-203ENST00000439080 WDR63Q8IWG1 891 aa22■■□□□ 1.11
TARDBP-203ENST00000439080 ZNF521Q96K83 1311 aa22■■□□□ 1.11
TARDBP-203ENST00000439080 KRT24Q2M2I5 525 aa21.99■■□□□ 1.11
TARDBP-203ENST00000439080 FLAD1Q8NFF5 587 aa21.99■■□□□ 1.11
TARDBP-203ENST00000439080 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
TARDBP-203ENST00000439080 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
TARDBP-203ENST00000439080 COL15A1P39059 1388 aa21.99■■□□□ 1.11
TARDBP-203ENST00000439080 RPS6KA4O75676 772 aa21.99■■□□□ 1.11
TARDBP-203ENST00000439080 TSR2Q969E8 191 aaKnown RBP21.99■■□□□ 1.11
TARDBP-203ENST00000439080 MSH5O43196 834 aa21.98■■□□□ 1.11
TARDBP-203ENST00000439080 ADRA2BP18089 450 aa21.98■■□□□ 1.11
TARDBP-203ENST00000439080 FANCIQ9NVI1 1328 aa21.97■■□□□ 1.11
TARDBP-203ENST00000439080 ZBTB7AO95365 584 aa21.97■■□□□ 1.11
TARDBP-203ENST00000439080 CANXP27824 592 aaKnown RBP21.97■■□□□ 1.11
TARDBP-203ENST00000439080 A1BGP04217 495 aa21.96■■□□□ 1.11
TARDBP-203ENST00000439080 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
TARDBP-203ENST00000439080 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
TARDBP-203ENST00000439080 MTFR1LQ9H019 292 aa21.94■■□□□ 1.1
TARDBP-203ENST00000439080 SPINK5Q9NQ38 1064 aaPredicted RBP21.94■■□□□ 1.1
TARDBP-203ENST00000439080 HOXB7P09629 217 aa21.93■■□□□ 1.1
TARDBP-203ENST00000439080 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
TARDBP-203ENST00000439080 SLC16A10Q8TF71 515 aa21.93■■□□□ 1.1
TARDBP-203ENST00000439080 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
TARDBP-203ENST00000439080 ZNF330Q9Y3S2 320 aaPredicted RBP21.93■■□□□ 1.1
TARDBP-203ENST00000439080 RFC4P35249 363 aa21.92■■□□□ 1.1
TARDBP-203ENST00000439080 EIF5P55010 431 aaKnown RBP21.92■■□□□ 1.1
TARDBP-203ENST00000439080 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
TARDBP-203ENST00000439080 DUSP27Q5VZP5 1158 aa21.92■■□□□ 1.1
TARDBP-203ENST00000439080 USP42Q9H9J4 1324 aaKnown RBP21.91■■□□□ 1.1
TARDBP-203ENST00000439080 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
TARDBP-203ENST00000439080 EIF2S2P20042 333 aaKnown RBP21.91■■□□□ 1.1
TARDBP-203ENST00000439080 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
TARDBP-203ENST00000439080 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
TARDBP-203ENST00000439080 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
TARDBP-203ENST00000439080 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
TARDBP-203ENST00000439080 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
TARDBP-203ENST00000439080 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
TARDBP-203ENST00000439080 MYH16Q9H6N6 1097 aa21.9■■□□□ 1.1
TARDBP-203ENST00000439080 HDGFL1Q5TGJ6 251 aa21.89■■□□□ 1.1
TARDBP-203ENST00000439080 NECTIN2Q92692 538 aa21.89■■□□□ 1.1
TARDBP-203ENST00000439080 SPON1Q9HCB6 807 aa21.89■■□□□ 1.1
TARDBP-203ENST00000439080 SRP68Q9UHB9 627 aaKnown RBP21.89■■□□□ 1.1
TARDBP-203ENST00000439080 ATF5Q9Y2D1 282 aaPredicted RBP21.89■■□□□ 1.1
TARDBP-203ENST00000439080 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
TARDBP-203ENST00000439080 NUP98P52948 1817 aa21.88■■□□□ 1.09
TARDBP-203ENST00000439080 A0A087WZG4 1122 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
TARDBP-203ENST00000439080 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 CACNA1FO60840 1977 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 E9PSI1 815 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 MYL6BP14649 208 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 NARFQ9UHQ1 456 aa21.87■■□□□ 1.09
TARDBP-203ENST00000439080 ZPR1O75312 459 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 GYS1P13807 737 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 PTGER2P43116 358 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
TARDBP-203ENST00000439080 USPL1Q5W0Q7 1092 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 CHPF2Q9P2E5 772 aa21.86■■□□□ 1.09
TARDBP-203ENST00000439080 ARFGEF2Q9Y6D5 1785 aa21.85■■□□□ 1.09
TARDBP-203ENST00000439080 ANXA1P04083 346 aa21.85■■□□□ 1.09
TARDBP-203ENST00000439080 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
TARDBP-203ENST00000439080 PDIA6Q15084 440 aa21.85■■□□□ 1.09
TARDBP-203ENST00000439080 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
TARDBP-203ENST00000439080 SGIP1Q9BQI5 828 aa21.85■■□□□ 1.09
TARDBP-203ENST00000439080 AFDNP55196 1824 aaKnown RBP21.84■■□□□ 1.09
TARDBP-203ENST00000439080 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
TARDBP-203ENST00000439080 DZIP3Q86Y13 1208 aaKnown RBP21.84■■□□□ 1.09
TARDBP-203ENST00000439080 ARXQ96QS3 562 aa21.84■■□□□ 1.09
TARDBP-203ENST00000439080 TBC1D2BQ9UPU7 963 aa21.84■■□□□ 1.09
TARDBP-203ENST00000439080 POLD1P28340 1107 aa21.83■■□□□ 1.08
TARDBP-203ENST00000439080 LRP10Q7Z4F1 713 aa21.83■■□□□ 1.08
TARDBP-203ENST00000439080 ZBED9Q6R2W3 1325 aa21.83■■□□□ 1.08
TARDBP-203ENST00000439080 FKBP8Q14318 412 aa21.82■■□□□ 1.08
TARDBP-203ENST00000439080 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
TARDBP-203ENST00000439080 CAMTA2O94983 1202 aa21.81■■□□□ 1.08
TARDBP-203ENST00000439080 BCL2L12Q9HB09 334 aa21.81■■□□□ 1.08
TARDBP-203ENST00000439080 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
TARDBP-203ENST00000439080 NRXN2Q9P2S2 1712 aa21.81■■□□□ 1.08
TARDBP-203ENST00000439080 KIF6Q6ZMV9 814 aa21.8■■□□□ 1.08
TARDBP-203ENST00000439080 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms