RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CCDC87Q9NVE4 849 aa21.07■□□□□ 0.96
SNRPB-202ENST00000438552 GNAI1P63096 354 aa21.06■□□□□ 0.96
SNRPB-202ENST00000438552 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
SNRPB-202ENST00000438552 ZBTB1Q9Y2K1 713 aa21.06■□□□□ 0.96
SNRPB-202ENST00000438552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
SNRPB-202ENST00000438552 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
SNRPB-202ENST00000438552 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
SNRPB-202ENST00000438552 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
SNRPB-202ENST00000438552 LRP5O75197 1615 aa21.04■□□□□ 0.96
SNRPB-202ENST00000438552 GIGYF1O75420 1035 aaPredicted RBP21.04■□□□□ 0.96
SNRPB-202ENST00000438552 STARD3NLO95772 234 aa21.04■□□□□ 0.96
SNRPB-202ENST00000438552 SSFA2P28290 1259 aa21.04■□□□□ 0.96
SNRPB-202ENST00000438552 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
SNRPB-202ENST00000438552 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
SNRPB-202ENST00000438552 RTCBQ9Y3I0 505 aaKnown RBP21.04■□□□□ 0.96
SNRPB-202ENST00000438552 COL24A1Q17RW2 1714 aa21.04■□□□□ 0.96
SNRPB-202ENST00000438552 MSH5O43196 834 aa21.03■□□□□ 0.96
SNRPB-202ENST00000438552 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
SNRPB-202ENST00000438552 TSR2Q969E8 191 aaKnown RBP21.03■□□□□ 0.96
SNRPB-202ENST00000438552 IL16Q14005 1332 aa21.03■□□□□ 0.96
SNRPB-202ENST00000438552 ZNF521Q96K83 1311 aa21.03■□□□□ 0.96
SNRPB-202ENST00000438552 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
SNRPB-202ENST00000438552 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
SNRPB-202ENST00000438552 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.95
SNRPB-202ENST00000438552 COL15A1P39059 1388 aa21.01■□□□□ 0.95
SNRPB-202ENST00000438552 BCORQ6W2J9 1755 aa21.01■□□□□ 0.95
SNRPB-202ENST00000438552 ZBTB7AO95365 584 aa21.01■□□□□ 0.95
SNRPB-202ENST00000438552 A1BGP04217 495 aa21.01■□□□□ 0.95
SNRPB-202ENST00000438552 CANXP27824 592 aaKnown RBP21.01■□□□□ 0.95
SNRPB-202ENST00000438552 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
SNRPB-202ENST00000438552 FLAD1Q8NFF5 587 aa21.01■□□□□ 0.95
SNRPB-202ENST00000438552 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
SNRPB-202ENST00000438552 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
SNRPB-202ENST00000438552 ADRA2BP18089 450 aa20.98■□□□□ 0.95
SNRPB-202ENST00000438552 ARHGEF1Q92888 912 aaKnown RBP20.98■□□□□ 0.95
SNRPB-202ENST00000438552 ZNF330Q9Y3S2 320 aaPredicted RBP20.98■□□□□ 0.95
SNRPB-202ENST00000438552 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
SNRPB-202ENST00000438552 SRCAPQ6ZRS2 3230 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 NBPF26B4DH59 902 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 EIF2S2P20042 333 aaKnown RBP20.96■□□□□ 0.95
SNRPB-202ENST00000438552 MSL1Q68DK7 614 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 NBPF10Q6P3W6 841 aaKnown RBP20.96■□□□□ 0.95
SNRPB-202ENST00000438552 NBPF15Q8N660 670 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 NECTIN2Q92692 538 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 MTFR1LQ9H019 292 aa20.96■□□□□ 0.95
SNRPB-202ENST00000438552 ATF5Q9Y2D1 282 aaPredicted RBP20.96■□□□□ 0.95
SNRPB-202ENST00000438552 RFC4P35249 363 aa20.95■□□□□ 0.94
SNRPB-202ENST00000438552 EIF5P55010 431 aaKnown RBP20.95■□□□□ 0.94
SNRPB-202ENST00000438552 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNRPB-202ENST00000438552 DUSP27Q5VZP5 1158 aa20.95■□□□□ 0.94
SNRPB-202ENST00000438552 C8orf58Q8NAV2 365 aa20.95■□□□□ 0.94
SNRPB-202ENST00000438552 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
SNRPB-202ENST00000438552 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
SNRPB-202ENST00000438552 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-202ENST00000438552 IL6STP40189 918 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-202ENST00000438552 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
SNRPB-202ENST00000438552 HOXB7P09629 217 aa20.93■□□□□ 0.94
SNRPB-202ENST00000438552 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
SNRPB-202ENST00000438552 SPON1Q9HCB6 807 aa20.93■□□□□ 0.94
SNRPB-202ENST00000438552 MYL6BP14649 208 aa20.92■□□□□ 0.94
SNRPB-202ENST00000438552 GOLGA2Q08379 1002 aa20.92■□□□□ 0.94
SNRPB-202ENST00000438552 HDGFL1Q5TGJ6 251 aa20.92■□□□□ 0.94
SNRPB-202ENST00000438552 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
SNRPB-202ENST00000438552 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
SNRPB-202ENST00000438552 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
SNRPB-202ENST00000438552 ANXA1P04083 346 aa20.9■□□□□ 0.94
SNRPB-202ENST00000438552 GYS1P13807 737 aa20.9■□□□□ 0.94
SNRPB-202ENST00000438552 PTGER2P43116 358 aa20.9■□□□□ 0.94
SNRPB-202ENST00000438552 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
SNRPB-202ENST00000438552 A0A087WZG4 1122 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 ZPR1O75312 459 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 EXOSC9Q06265 439 aaKnown RBP20.89■□□□□ 0.93
SNRPB-202ENST00000438552 PDIA6Q15084 440 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 NPM2Q86SE8 214 aaKnown RBP20.89■□□□□ 0.93
SNRPB-202ENST00000438552 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 ARXQ96QS3 562 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 SGIP1Q9BQI5 828 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 CHPF2Q9P2E5 772 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 NARFQ9UHQ1 456 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
SNRPB-202ENST00000438552 NUP98P52948 1817 aa20.88■□□□□ 0.93
SNRPB-202ENST00000438552 E9PSI1 815 aa20.88■□□□□ 0.93
SNRPB-202ENST00000438552 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
SNRPB-202ENST00000438552 DZIP3Q86Y13 1208 aaKnown RBP20.88■□□□□ 0.93
SNRPB-202ENST00000438552 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
SNRPB-202ENST00000438552 CAMTA2O94983 1202 aa20.86■□□□□ 0.93
SNRPB-202ENST00000438552 FKBP8Q14318 412 aa20.86■□□□□ 0.93
SNRPB-202ENST00000438552 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
SNRPB-202ENST00000438552 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
SNRPB-202ENST00000438552 DDX21Q9NR30 783 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNRPB-202ENST00000438552 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
SNRPB-202ENST00000438552 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
SNRPB-202ENST00000438552 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
SNRPB-202ENST00000438552 POLD1P28340 1107 aa20.85■□□□□ 0.93
SNRPB-202ENST00000438552 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
SNRPB-202ENST00000438552 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
SNRPB-202ENST00000438552 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
SNRPB-202ENST00000438552 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
SNRPB-202ENST00000438552 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.93
SNRPB-202ENST00000438552 MMP10P09238 476 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms