RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
HLA-F-220ENST00000434407 PHF14O94880 888 aa24.12■■□□□ 1.45
HLA-F-220ENST00000434407 C4AP0C0L4 1744 aa24.11■■□□□ 1.45
HLA-F-220ENST00000434407 STARD3NLO95772 234 aa24.11■■□□□ 1.45
HLA-F-220ENST00000434407 NCBP3Q53F19 620 aaKnown RBP24.1■■□□□ 1.45
HLA-F-220ENST00000434407 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
HLA-F-220ENST00000434407 SNRPA1P09661 255 aaKnown RBP24.09■■□□□ 1.45
HLA-F-220ENST00000434407 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
HLA-F-220ENST00000434407 ARHGEF1Q92888 912 aaKnown RBP24.09■■□□□ 1.45
HLA-F-220ENST00000434407 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
HLA-F-220ENST00000434407 ZBTB1Q9Y2K1 713 aa24.08■■□□□ 1.45
HLA-F-220ENST00000434407 CHL1O00533 1208 aa24.07■■□□□ 1.44
HLA-F-220ENST00000434407 TSPYL4Q9UJ04 414 aa24.07■■□□□ 1.44
HLA-F-220ENST00000434407 USP16Q9Y5T5 823 aa24.07■■□□□ 1.44
HLA-F-220ENST00000434407 LAMB4A4D0S4 1761 aa24.06■■□□□ 1.44
HLA-F-220ENST00000434407 PRAMEF22A3QJZ6 481 aa24.06■■□□□ 1.44
HLA-F-220ENST00000434407 CCER2I3L3R5 266 aa24.06■■□□□ 1.44
HLA-F-220ENST00000434407 CCDC27Q2M243 656 aa24.06■■□□□ 1.44
HLA-F-220ENST00000434407 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
HLA-F-220ENST00000434407 DIEXFQ68CQ4 756 aaKnown RBP24.05■■□□□ 1.44
HLA-F-220ENST00000434407 ZNF853P0CG23 659 aa24.04■■□□□ 1.44
HLA-F-220ENST00000434407 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
HLA-F-220ENST00000434407 RFC4P35249 363 aa24.03■■□□□ 1.44
HLA-F-220ENST00000434407 FAM9BQ8IZU0 186 aa24.03■■□□□ 1.44
HLA-F-220ENST00000434407 CFAP44Q96MT7 982 aa24.03■■□□□ 1.44
HLA-F-220ENST00000434407 COL15A1P39059 1388 aa24.03■■□□□ 1.44
HLA-F-220ENST00000434407 A1BGP04217 495 aa24.02■■□□□ 1.44
HLA-F-220ENST00000434407 POLD1P28340 1107 aa24.02■■□□□ 1.44
HLA-F-220ENST00000434407 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
HLA-F-220ENST00000434407 GYS1P13807 737 aa24.01■■□□□ 1.43
HLA-F-220ENST00000434407 CANXP27824 592 aaKnown RBP24.01■■□□□ 1.43
HLA-F-220ENST00000434407 IL6STP40189 918 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-220ENST00000434407 CALD1Q05682 793 aaKnown RBP24.01■■□□□ 1.43
HLA-F-220ENST00000434407 ARXQ96QS3 562 aa24.01■■□□□ 1.43
HLA-F-220ENST00000434407 PPP1R1BQ9UD71 204 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-220ENST00000434407 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
HLA-F-220ENST00000434407 IFT57Q9NWB7 429 aa24■■□□□ 1.43
HLA-F-220ENST00000434407 WWC1Q8IX03 1113 aa23.99■■□□□ 1.43
HLA-F-220ENST00000434407 NLGN1Q8N2Q7 840 aa23.98■■□□□ 1.43
HLA-F-220ENST00000434407 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
HLA-F-220ENST00000434407 NARFQ9UHQ1 456 aa23.98■■□□□ 1.43
HLA-F-220ENST00000434407 NBPF26B4DH59 902 aa23.97■■□□□ 1.43
HLA-F-220ENST00000434407 GNAI1P63096 354 aa23.97■■□□□ 1.43
HLA-F-220ENST00000434407 NBPF10Q6P3W6 841 aaKnown RBP23.97■■□□□ 1.43
HLA-F-220ENST00000434407 NGEFQ8N5V2 710 aa23.97■■□□□ 1.43
HLA-F-220ENST00000434407 NBPF15Q8N660 670 aa23.97■■□□□ 1.43
HLA-F-220ENST00000434407 LAS1LQ9Y4W2 734 aaKnown RBP23.97■■□□□ 1.43
HLA-F-220ENST00000434407 A0A087WZG4 1122 aa23.96■■□□□ 1.43
HLA-F-220ENST00000434407 MBIPQ9NS73 344 aa23.96■■□□□ 1.43
HLA-F-220ENST00000434407 ZPR1O75312 459 aa23.95■■□□□ 1.42
HLA-F-220ENST00000434407 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
HLA-F-220ENST00000434407 USPL1Q5W0Q7 1092 aa23.94■■□□□ 1.42
HLA-F-220ENST00000434407 FHDC1Q9C0D6 1143 aaPredicted RBP23.94■■□□□ 1.42
HLA-F-220ENST00000434407 SCN7AQ01118 1682 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 IL16Q14005 1332 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 ERBB4Q15303 1308 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 PIP4K2AP48426 406 aaPredicted RBP23.93■■□□□ 1.42
HLA-F-220ENST00000434407 FKBP8Q14318 412 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 MIER1Q8N108 512 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 BCL2L12Q9HB09 334 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
HLA-F-220ENST00000434407 MMP10P09238 476 aa23.92■■□□□ 1.42
HLA-F-220ENST00000434407 HOXB7P09629 217 aa23.92■■□□□ 1.42
HLA-F-220ENST00000434407 KRT24Q2M2I5 525 aa23.92■■□□□ 1.42
HLA-F-220ENST00000434407 SYT17Q9BSW7 474 aa23.92■■□□□ 1.42
HLA-F-220ENST00000434407 TM4SF1P30408 202 aa23.91■■□□□ 1.42
HLA-F-220ENST00000434407 WDR63Q8IWG1 891 aa23.91■■□□□ 1.42
HLA-F-220ENST00000434407 KIF13BQ9NQT8 1826 aa23.89■■□□□ 1.42
HLA-F-220ENST00000434407 CAMTA2O94983 1202 aa23.89■■□□□ 1.41
HLA-F-220ENST00000434407 PDIA6Q15084 440 aa23.89■■□□□ 1.41
HLA-F-220ENST00000434407 TBC1D2BQ9UPU7 963 aa23.89■■□□□ 1.41
HLA-F-220ENST00000434407 RGL2O15211 777 aa23.88■■□□□ 1.41
HLA-F-220ENST00000434407 LRP10Q7Z4F1 713 aa23.88■■□□□ 1.41
HLA-F-220ENST00000434407 NPM2Q86SE8 214 aaKnown RBP23.88■■□□□ 1.41
HLA-F-220ENST00000434407 DZIP3Q86Y13 1208 aaKnown RBP23.88■■□□□ 1.41
HLA-F-220ENST00000434407 ZNF330Q9Y3S2 320 aaPredicted RBP23.88■■□□□ 1.41
HLA-F-220ENST00000434407 ZNF521Q96K83 1311 aa23.87■■□□□ 1.41
HLA-F-220ENST00000434407 DUSP27Q5VZP5 1158 aa23.87■■□□□ 1.41
HLA-F-220ENST00000434407 CD2APQ9Y5K6 639 aa23.87■■□□□ 1.41
HLA-F-220ENST00000434407 AFDNP55196 1824 aaKnown RBP23.87■■□□□ 1.41
HLA-F-220ENST00000434407 EIF2S2P20042 333 aaKnown RBP23.86■■□□□ 1.41
HLA-F-220ENST00000434407 DDR1Q08345 913 aa23.86■■□□□ 1.41
HLA-F-220ENST00000434407 SALL2Q9Y467 1007 aaPredicted RBP23.86■■□□□ 1.41
HLA-F-220ENST00000434407 NRXN2Q9P2S2 1712 aa23.86■■□□□ 1.41
HLA-F-220ENST00000434407 POLRMTO00411 1230 aaKnown RBP23.85■■□□□ 1.41
HLA-F-220ENST00000434407 NFIXQ14938 502 aa23.85■■□□□ 1.41
HLA-F-220ENST00000434407 CLEC4GQ6UXB4 293 aa23.85■■□□□ 1.41
HLA-F-220ENST00000434407 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
HLA-F-220ENST00000434407 NUP98P52948 1817 aa23.84■■□□□ 1.41
HLA-F-220ENST00000434407 C8orf58Q8NAV2 365 aa23.83■■□□□ 1.41
HLA-F-220ENST00000434407 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
HLA-F-220ENST00000434407 C10orf71Q711Q0 1435 aa23.83■■□□□ 1.4
HLA-F-220ENST00000434407 GOLGB1Q14789 3259 aaKnown RBP23.83■■□□□ 1.4
HLA-F-220ENST00000434407 MYL6BP14649 208 aa23.82■■□□□ 1.4
HLA-F-220ENST00000434407 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
HLA-F-220ENST00000434407 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
HLA-F-220ENST00000434407 TBC1D9BQ66K14 1250 aa23.82■■□□□ 1.4
HLA-F-220ENST00000434407 DDX21Q9NR30 783 aaKnown RBP eCLIP23.82■■□□□ 1.4
HLA-F-220ENST00000434407 ERVV-1B6SEH8 477 aa23.81■■□□□ 1.4
HLA-F-220ENST00000434407 NLGN2Q8NFZ4 835 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms