RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 STARD3NLO95772 234 aa19.63■□□□□ 0.73
CDRT15-202ENST00000431716 COL23A1Q86Y22 540 aaPredicted RBP19.63■□□□□ 0.73
CDRT15-202ENST00000431716 LINC00116Q8NCU8 138 aa19.63■□□□□ 0.73
CDRT15-202ENST00000431716 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
CDRT15-202ENST00000431716 POLD1P28340 1107 aa19.62■□□□□ 0.73
CDRT15-202ENST00000431716 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
CDRT15-202ENST00000431716 PHF14O94880 888 aa19.61■□□□□ 0.73
CDRT15-202ENST00000431716 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
CDRT15-202ENST00000431716 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
CDRT15-202ENST00000431716 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
CDRT15-202ENST00000431716 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
CDRT15-202ENST00000431716 CICQ96RK0 1608 aaPredicted RBP19.61■□□□□ 0.73
CDRT15-202ENST00000431716 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 GNPATO15228 680 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 HOXB7P09629 217 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
CDRT15-202ENST00000431716 ARXQ96QS3 562 aa19.6■□□□□ 0.73
CDRT15-202ENST00000431716 C5P01031 1676 aa19.59■□□□□ 0.73
CDRT15-202ENST00000431716 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
CDRT15-202ENST00000431716 CNTNAP4Q9C0A0 1308 aa19.59■□□□□ 0.73
CDRT15-202ENST00000431716 CHMP4AQ9BY43 222 aa19.59■□□□□ 0.73
CDRT15-202ENST00000431716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.58■□□□□ 0.72
CDRT15-202ENST00000431716 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
CDRT15-202ENST00000431716 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
CDRT15-202ENST00000431716 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
CDRT15-202ENST00000431716 TJP1Q07157 1748 aa19.58■□□□□ 0.72
CDRT15-202ENST00000431716 SSFA2P28290 1259 aa19.57■□□□□ 0.72
CDRT15-202ENST00000431716 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
CDRT15-202ENST00000431716 TRMT2AQ8IZ69 625 aaKnown RBP19.57■□□□□ 0.72
CDRT15-202ENST00000431716 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
CDRT15-202ENST00000431716 SGIP1Q9BQI5 828 aa19.57■□□□□ 0.72
CDRT15-202ENST00000431716 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
CDRT15-202ENST00000431716 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
CDRT15-202ENST00000431716 PRAMEF22A3QJZ6 481 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 KRT24Q2M2I5 525 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 SMIM5Q71RC9 77 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 C8orf58Q8NAV2 365 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
CDRT15-202ENST00000431716 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
CDRT15-202ENST00000431716 TRAPPC3LQ5T215 181 aa19.55■□□□□ 0.72
CDRT15-202ENST00000431716 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
CDRT15-202ENST00000431716 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
CDRT15-202ENST00000431716 FHDC1Q9C0D6 1143 aaPredicted RBP19.55■□□□□ 0.72
CDRT15-202ENST00000431716 ELL2O00472 640 aaPredicted RBP19.54■□□□□ 0.72
CDRT15-202ENST00000431716 RPS6KA4O75676 772 aa19.54■□□□□ 0.72
CDRT15-202ENST00000431716 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
CDRT15-202ENST00000431716 AMIGO3Q86WK7 504 aa19.54■□□□□ 0.72
CDRT15-202ENST00000431716 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
CDRT15-202ENST00000431716 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
CDRT15-202ENST00000431716 A1BGP04217 495 aa19.53■□□□□ 0.72
CDRT15-202ENST00000431716 EIF2S2P20042 333 aaKnown RBP19.53■□□□□ 0.72
CDRT15-202ENST00000431716 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
CDRT15-202ENST00000431716 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.72
CDRT15-202ENST00000431716 TSPYL6Q8N831 410 aa19.52■□□□□ 0.72
CDRT15-202ENST00000431716 SYT17Q9BSW7 474 aa19.52■□□□□ 0.72
CDRT15-202ENST00000431716 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.71
CDRT15-202ENST00000431716 ADRA2BP18089 450 aa19.51■□□□□ 0.71
CDRT15-202ENST00000431716 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
CDRT15-202ENST00000431716 IL6STP40189 918 aaPredicted RBP19.51■□□□□ 0.71
CDRT15-202ENST00000431716 YTHDC1Q96MU7 727 aaKnown RBP19.51■□□□□ 0.71
CDRT15-202ENST00000431716 ZBTB1Q9Y2K1 713 aa19.51■□□□□ 0.71
CDRT15-202ENST00000431716 VAMP4O75379 141 aa19.5■□□□□ 0.71
CDRT15-202ENST00000431716 RFC4P35249 363 aa19.5■□□□□ 0.71
CDRT15-202ENST00000431716 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
CDRT15-202ENST00000431716 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
CDRT15-202ENST00000431716 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
CDRT15-202ENST00000431716 EIF5P55010 431 aaKnown RBP19.49■□□□□ 0.71
CDRT15-202ENST00000431716 DBF4Q9UBU7 674 aaPredicted RBP19.49■□□□□ 0.71
CDRT15-202ENST00000431716 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 A0A087WZG4 1122 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
CDRT15-202ENST00000431716 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 NECTIN2Q92692 538 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 ARHGEF1Q92888 912 aaKnown RBP19.48■□□□□ 0.71
CDRT15-202ENST00000431716 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
CDRT15-202ENST00000431716 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
CDRT15-202ENST00000431716 ZNF428Q96B54 188 aa19.47■□□□□ 0.71
CDRT15-202ENST00000431716 PDIA6Q15084 440 aa19.46■□□□□ 0.71
CDRT15-202ENST00000431716 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
CDRT15-202ENST00000431716 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
CDRT15-202ENST00000431716 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
CDRT15-202ENST00000431716 PIP4K2AP48426 406 aaPredicted RBP19.45■□□□□ 0.7
CDRT15-202ENST00000431716 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
CDRT15-202ENST00000431716 ZNF330Q9Y3S2 320 aaPredicted RBP19.45■□□□□ 0.7
CDRT15-202ENST00000431716 COL15A1P39059 1388 aa19.44■□□□□ 0.7
CDRT15-202ENST00000431716 MYL6BP14649 208 aa19.44■□□□□ 0.7
CDRT15-202ENST00000431716 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
CDRT15-202ENST00000431716 CACNA1FO60840 1977 aa19.43■□□□□ 0.7
CDRT15-202ENST00000431716 ZPR1O75312 459 aa19.42■□□□□ 0.7
CDRT15-202ENST00000431716 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
CDRT15-202ENST00000431716 NARFQ9UHQ1 456 aa19.42■□□□□ 0.7
CDRT15-202ENST00000431716 ANXA1P04083 346 aa19.41■□□□□ 0.7
CDRT15-202ENST00000431716 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
CDRT15-202ENST00000431716 MMP10P09238 476 aa19.41■□□□□ 0.7
CDRT15-202ENST00000431716 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
CDRT15-202ENST00000431716 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms