RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 UBR3Q6ZT12 1888 aa32.77■■■□□ 2.84
CPNE1-212ENST00000430570 COL23A1Q86Y22 540 aaPredicted RBP32.77■■■□□ 2.84
CPNE1-212ENST00000430570 PHF14O94880 888 aa32.76■■■□□ 2.83
CPNE1-212ENST00000430570 STARD3NLO95772 234 aa32.76■■■□□ 2.83
CPNE1-212ENST00000430570 KRT24Q2M2I5 525 aa32.76■■■□□ 2.83
CPNE1-212ENST00000430570 WDR63Q8IWG1 891 aa32.76■■■□□ 2.83
CPNE1-212ENST00000430570 CCDC87Q9NVE4 849 aa32.76■■■□□ 2.83
CPNE1-212ENST00000430570 QSER1Q2KHR3 1735 aa32.75■■■□□ 2.83
CPNE1-212ENST00000430570 RPS6KA4O75676 772 aa32.75■■■□□ 2.83
CPNE1-212ENST00000430570 ZBTB1Q9Y2K1 713 aa32.75■■■□□ 2.83
CPNE1-212ENST00000430570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.74■■■□□ 2.83
CPNE1-212ENST00000430570 RTCBQ9Y3I0 505 aaKnown RBP32.74■■■□□ 2.83
CPNE1-212ENST00000430570 CASZ1Q86V15 1759 aa32.74■■■□□ 2.83
CPNE1-212ENST00000430570 IL16Q14005 1332 aa32.73■■■□□ 2.83
CPNE1-212ENST00000430570 ZNF521Q96K83 1311 aa32.73■■■□□ 2.83
CPNE1-212ENST00000430570 A1BGP04217 495 aa32.73■■■□□ 2.83
CPNE1-212ENST00000430570 SPINK5Q9NQ38 1064 aaPredicted RBP32.72■■■□□ 2.83
CPNE1-212ENST00000430570 SSFA2P28290 1259 aa32.71■■■□□ 2.83
CPNE1-212ENST00000430570 TSR2Q969E8 191 aaKnown RBP32.71■■■□□ 2.83
CPNE1-212ENST00000430570 CANXP27824 592 aaKnown RBP32.7■■■□□ 2.82
CPNE1-212ENST00000430570 MSH5O43196 834 aa32.69■■■□□ 2.82
CPNE1-212ENST00000430570 FLAD1Q8NFF5 587 aa32.69■■■□□ 2.82
CPNE1-212ENST00000430570 PIP4K2AP48426 406 aaPredicted RBP32.68■■■□□ 2.82
CPNE1-212ENST00000430570 TRAPPC3LQ5T215 181 aa32.68■■■□□ 2.82
CPNE1-212ENST00000430570 SOS1Q07889 1333 aaPredicted RBP32.68■■■□□ 2.82
CPNE1-212ENST00000430570 ZBTB7AO95365 584 aa32.67■■■□□ 2.82
CPNE1-212ENST00000430570 ARHGEF1Q92888 912 aaKnown RBP32.67■■■□□ 2.82
CPNE1-212ENST00000430570 LAMB4A4D0S4 1761 aa32.65■■■□□ 2.82
CPNE1-212ENST00000430570 NBPF26B4DH59 902 aa32.64■■■□□ 2.82
CPNE1-212ENST00000430570 NBPF10Q6P3W6 841 aaKnown RBP32.64■■■□□ 2.82
CPNE1-212ENST00000430570 NBPF15Q8N660 670 aa32.64■■■□□ 2.82
CPNE1-212ENST00000430570 C8orf58Q8NAV2 365 aa32.64■■■□□ 2.82
CPNE1-212ENST00000430570 EIF2S2P20042 333 aaKnown RBP32.63■■■□□ 2.81
CPNE1-212ENST00000430570 EIF5P55010 431 aaKnown RBP32.63■■■□□ 2.81
CPNE1-212ENST00000430570 DUSP27Q5VZP5 1158 aa32.63■■■□□ 2.81
CPNE1-212ENST00000430570 FANCIQ9NVI1 1328 aa32.62■■■□□ 2.81
CPNE1-212ENST00000430570 ELL2O00472 640 aaPredicted RBP32.62■■■□□ 2.81
CPNE1-212ENST00000430570 ADRA2BP18089 450 aa32.62■■■□□ 2.81
CPNE1-212ENST00000430570 ATF5Q9Y2D1 282 aaPredicted RBP32.62■■■□□ 2.81
CPNE1-212ENST00000430570 SLC16A10Q8TF71 515 aa32.61■■■□□ 2.81
CPNE1-212ENST00000430570 IL6STP40189 918 aaPredicted RBP32.6■■■□□ 2.81
CPNE1-212ENST00000430570 TSPYL6Q8N831 410 aa32.6■■■□□ 2.81
CPNE1-212ENST00000430570 NECTIN2Q92692 538 aa32.6■■■□□ 2.81
CPNE1-212ENST00000430570 COL15A1P39059 1388 aa32.6■■■□□ 2.81
CPNE1-212ENST00000430570 RFC4P35249 363 aa32.59■■■□□ 2.81
CPNE1-212ENST00000430570 HNRNPUQ00839 825 aaKnown RBP eCLIP32.59■■■□□ 2.81
CPNE1-212ENST00000430570 GOLGA2Q08379 1002 aa32.59■■■□□ 2.81
CPNE1-212ENST00000430570 MTFR1LQ9H019 292 aa32.59■■■□□ 2.81
CPNE1-212ENST00000430570 ZNF330Q9Y3S2 320 aaPredicted RBP32.59■■■□□ 2.81
CPNE1-212ENST00000430570 SRP68Q9UHB9 627 aaKnown RBP32.58■■■□□ 2.81
CPNE1-212ENST00000430570 C4AP0C0L4 1744 aa32.57■■■□□ 2.81
CPNE1-212ENST00000430570 CDCA7LQ96GN5 454 aa32.57■■■□□ 2.8
CPNE1-212ENST00000430570 HOXB7P09629 217 aa32.56■■■□□ 2.8
CPNE1-212ENST00000430570 MSL1Q68DK7 614 aa32.56■■■□□ 2.8
CPNE1-212ENST00000430570 PDIA6Q15084 440 aa32.55■■■□□ 2.8
CPNE1-212ENST00000430570 SPON1Q9HCB6 807 aa32.55■■■□□ 2.8
CPNE1-212ENST00000430570 MYH16Q9H6N6 1097 aa32.54■■■□□ 2.8
CPNE1-212ENST00000430570 ANXA1P04083 346 aa32.53■■■□□ 2.8
CPNE1-212ENST00000430570 MYL6BP14649 208 aa32.53■■■□□ 2.8
CPNE1-212ENST00000430570 EXOSC9Q06265 439 aaKnown RBP32.53■■■□□ 2.8
CPNE1-212ENST00000430570 SLFN5Q08AF3 891 aa32.53■■■□□ 2.8
CPNE1-212ENST00000430570 TBC1D2BQ9UPU7 963 aa32.53■■■□□ 2.8
CPNE1-212ENST00000430570 USP42Q9H9J4 1324 aaKnown RBP32.53■■■□□ 2.8
CPNE1-212ENST00000430570 PTGER2P43116 358 aa32.52■■■□□ 2.8
CPNE1-212ENST00000430570 PROSER3Q2NL68 480 aa32.52■■■□□ 2.8
CPNE1-212ENST00000430570 HDGFL1Q5TGJ6 251 aa32.52■■■□□ 2.8
CPNE1-212ENST00000430570 NARFQ9UHQ1 456 aa32.52■■■□□ 2.8
CPNE1-212ENST00000430570 ERBB4Q15303 1308 aa32.52■■■□□ 2.8
CPNE1-212ENST00000430570 A0A087WZG4 1122 aa32.51■■■□□ 2.8
CPNE1-212ENST00000430570 GYS1P13807 737 aa32.51■■■□□ 2.8
CPNE1-212ENST00000430570 USPL1Q5W0Q7 1092 aa32.51■■■□□ 2.8
CPNE1-212ENST00000430570 E9PSI1 815 aa32.51■■■□□ 2.79
CPNE1-212ENST00000430570 LRP10Q7Z4F1 713 aa32.51■■■□□ 2.79
CPNE1-212ENST00000430570 ARXQ96QS3 562 aa32.51■■■□□ 2.79
CPNE1-212ENST00000430570 SGIP1Q9BQI5 828 aa32.51■■■□□ 2.79
CPNE1-212ENST00000430570 TWISTNBQ3B726 338 aaPredicted RBP32.5■■■□□ 2.79
CPNE1-212ENST00000430570 BCL2L12Q9HB09 334 aa32.5■■■□□ 2.79
CPNE1-212ENST00000430570 CHPF2Q9P2E5 772 aa32.5■■■□□ 2.79
CPNE1-212ENST00000430570 ZPR1O75312 459 aa32.49■■■□□ 2.79
CPNE1-212ENST00000430570 COL24A1Q17RW2 1714 aa32.48■■■□□ 2.79
CPNE1-212ENST00000430570 NPM2Q86SE8 214 aaKnown RBP32.48■■■□□ 2.79
CPNE1-212ENST00000430570 DZIP3Q86Y13 1208 aaKnown RBP32.48■■■□□ 2.79
CPNE1-212ENST00000430570 FKBP8Q14318 412 aa32.47■■■□□ 2.79
CPNE1-212ENST00000430570 TRMT2AQ8IZ69 625 aaKnown RBP32.47■■■□□ 2.79
CPNE1-212ENST00000430570 DDX21Q9NR30 783 aaKnown RBP eCLIP32.47■■■□□ 2.79
CPNE1-212ENST00000430570 VAMP4O75379 141 aa32.46■■■□□ 2.79
CPNE1-212ENST00000430570 CAMTA2O94983 1202 aa32.46■■■□□ 2.79
CPNE1-212ENST00000430570 TTLL7Q6ZT98 887 aa32.45■■■□□ 2.78
CPNE1-212ENST00000430570 NLGN1Q8N2Q7 840 aa32.44■■■□□ 2.78
CPNE1-212ENST00000430570 LRP5O75197 1615 aa32.44■■■□□ 2.78
CPNE1-212ENST00000430570 TCERG1O14776 1098 aaKnown RBP32.43■■■□□ 2.78
CPNE1-212ENST00000430570 DBF4Q9UBU7 674 aaPredicted RBP32.43■■■□□ 2.78
CPNE1-212ENST00000430570 CCDC30Q5VVM6 783 aa32.42■■■□□ 2.78
CPNE1-212ENST00000430570 POLD1P28340 1107 aa32.41■■■□□ 2.78
CPNE1-212ENST00000430570 COPS6Q7L5N1 327 aa32.4■■■□□ 2.78
CPNE1-212ENST00000430570 XAGE3Q8WTP9 111 aa32.4■■■□□ 2.78
CPNE1-212ENST00000430570 AIMP1Q12904 312 aaKnown RBP32.39■■■□□ 2.78
CPNE1-212ENST00000430570 ZBED9Q6R2W3 1325 aa32.39■■■□□ 2.78
CPNE1-212ENST00000430570 SCN7AQ01118 1682 aa32.38■■■□□ 2.77
CPNE1-212ENST00000430570 MMP10P09238 476 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms