RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 TUBGCP6Q96RT7 1819 aa26.18■■□□□ 1.78
CSNK1E-207ENST00000430335 CASZ1Q86V15 1759 aa26.18■■□□□ 1.78
CSNK1E-207ENST00000430335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 GIGYF1O75420 1035 aaPredicted RBP26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 COL23A1Q86Y22 540 aaPredicted RBP26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 WDR63Q8IWG1 891 aa26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 SALL2Q9Y467 1007 aaPredicted RBP26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 UBR3Q6ZT12 1888 aa26.17■■□□□ 1.78
CSNK1E-207ENST00000430335 ADRA2BP18089 450 aa26.16■■□□□ 1.78
CSNK1E-207ENST00000430335 SLC16A10Q8TF71 515 aa26.16■■□□□ 1.78
CSNK1E-207ENST00000430335 USP16Q9Y5T5 823 aa26.16■■□□□ 1.78
CSNK1E-207ENST00000430335 MYH14Q7Z406 1995 aaKnown RBP26.16■■□□□ 1.78
CSNK1E-207ENST00000430335 PRAMEF22A3QJZ6 481 aa26.15■■□□□ 1.78
CSNK1E-207ENST00000430335 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
CSNK1E-207ENST00000430335 PHF14O94880 888 aa26.14■■□□□ 1.78
CSNK1E-207ENST00000430335 ZBTB1Q9Y2K1 713 aa26.14■■□□□ 1.78
CSNK1E-207ENST00000430335 TRAPPC3LQ5T215 181 aa26.13■■□□□ 1.77
CSNK1E-207ENST00000430335 SOS1Q07889 1333 aaPredicted RBP26.13■■□□□ 1.77
CSNK1E-207ENST00000430335 SMIM5Q71RC9 77 aa26.12■■□□□ 1.77
CSNK1E-207ENST00000430335 MTFR1LQ9H019 292 aa26.12■■□□□ 1.77
CSNK1E-207ENST00000430335 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
CSNK1E-207ENST00000430335 MSH5O43196 834 aa26.1■■□□□ 1.77
CSNK1E-207ENST00000430335 A1BGP04217 495 aa26.1■■□□□ 1.77
CSNK1E-207ENST00000430335 ARHGEF1Q92888 912 aaKnown RBP26.1■■□□□ 1.77
CSNK1E-207ENST00000430335 ZBTB7AO95365 584 aa26.09■■□□□ 1.77
CSNK1E-207ENST00000430335 CANXP27824 592 aaKnown RBP26.09■■□□□ 1.77
CSNK1E-207ENST00000430335 HOXB7P09629 217 aa26.08■■□□□ 1.77
CSNK1E-207ENST00000430335 IL6STP40189 918 aaPredicted RBP26.08■■□□□ 1.77
CSNK1E-207ENST00000430335 EIF5P55010 431 aaKnown RBP26.08■■□□□ 1.77
CSNK1E-207ENST00000430335 SPON1Q9HCB6 807 aa26.08■■□□□ 1.77
CSNK1E-207ENST00000430335 LAMB4A4D0S4 1761 aa26.07■■□□□ 1.76
CSNK1E-207ENST00000430335 RFC4P35249 363 aa26.06■■□□□ 1.76
CSNK1E-207ENST00000430335 KRT24Q2M2I5 525 aa26.06■■□□□ 1.76
CSNK1E-207ENST00000430335 ERBB4Q15303 1308 aa26.06■■□□□ 1.76
CSNK1E-207ENST00000430335 COL15A1P39059 1388 aa26.06■■□□□ 1.76
CSNK1E-207ENST00000430335 A0A087WZG4 1122 aa26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 NBPF26B4DH59 902 aa26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 NBPF10Q6P3W6 841 aaKnown RBP26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 NBPF15Q8N660 670 aa26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 TSR2Q969E8 191 aaKnown RBP26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 ATF5Q9Y2D1 282 aaPredicted RBP26.04■■□□□ 1.76
CSNK1E-207ENST00000430335 DUSP27Q5VZP5 1158 aa26.03■■□□□ 1.76
CSNK1E-207ENST00000430335 USP42Q9H9J4 1324 aaKnown RBP26.03■■□□□ 1.76
CSNK1E-207ENST00000430335 PTGER2P43116 358 aa26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 SGIP1Q9BQI5 828 aa26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 MYH16Q9H6N6 1097 aa26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 SPINK5Q9NQ38 1064 aaPredicted RBP26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 FANCIQ9NVI1 1328 aa26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 LRP5O75197 1615 aa26.02■■□□□ 1.76
CSNK1E-207ENST00000430335 EIF2S2P20042 333 aaKnown RBP26.01■■□□□ 1.75
CSNK1E-207ENST00000430335 PIP4K2AP48426 406 aaPredicted RBP26.01■■□□□ 1.75
CSNK1E-207ENST00000430335 NPM2Q86SE8 214 aaKnown RBP26.01■■□□□ 1.75
CSNK1E-207ENST00000430335 NARFQ9UHQ1 456 aa26.01■■□□□ 1.75
CSNK1E-207ENST00000430335 GYS1P13807 737 aa26■■□□□ 1.75
CSNK1E-207ENST00000430335 GOLGA2Q08379 1002 aa26■■□□□ 1.75
CSNK1E-207ENST00000430335 C8orf58Q8NAV2 365 aa26■■□□□ 1.75
CSNK1E-207ENST00000430335 C4AP0C0L4 1744 aa26■■□□□ 1.75
CSNK1E-207ENST00000430335 COL24A1Q17RW2 1714 aa26■■□□□ 1.75
CSNK1E-207ENST00000430335 ZPR1O75312 459 aa25.99■■□□□ 1.75
CSNK1E-207ENST00000430335 NLGN1Q8N2Q7 840 aa25.99■■□□□ 1.75
CSNK1E-207ENST00000430335 SRP68Q9UHB9 627 aaKnown RBP25.99■■□□□ 1.75
CSNK1E-207ENST00000430335 ZNF330Q9Y3S2 320 aaPredicted RBP25.99■■□□□ 1.75
CSNK1E-207ENST00000430335 PDIA6Q15084 440 aa25.98■■□□□ 1.75
CSNK1E-207ENST00000430335 HDGFL1Q5TGJ6 251 aa25.98■■□□□ 1.75
CSNK1E-207ENST00000430335 MSL1Q68DK7 614 aa25.98■■□□□ 1.75
CSNK1E-207ENST00000430335 CHMP4AQ9BY43 222 aa25.98■■□□□ 1.75
CSNK1E-207ENST00000430335 E9PSI1 815 aa25.97■■□□□ 1.75
CSNK1E-207ENST00000430335 POLD1P28340 1107 aa25.97■■□□□ 1.75
CSNK1E-207ENST00000430335 ELL2O00472 640 aaPredicted RBP25.96■■□□□ 1.75
CSNK1E-207ENST00000430335 USPL1Q5W0Q7 1092 aa25.96■■□□□ 1.75
CSNK1E-207ENST00000430335 SRCAPQ6ZRS2 3230 aa25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 LRP10Q7Z4F1 713 aa25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 DZIP3Q86Y13 1208 aaKnown RBP25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 TSPYL6Q8N831 410 aa25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 DDX21Q9NR30 783 aaKnown RBP eCLIP25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 TBC1D2BQ9UPU7 963 aa25.95■■□□□ 1.74
CSNK1E-207ENST00000430335 MYL6BP14649 208 aa25.94■■□□□ 1.74
CSNK1E-207ENST00000430335 HNRNPUQ00839 825 aaKnown RBP eCLIP25.94■■□□□ 1.74
CSNK1E-207ENST00000430335 SLFN5Q08AF3 891 aa25.94■■□□□ 1.74
CSNK1E-207ENST00000430335 TWISTNBQ3B726 338 aaPredicted RBP25.94■■□□□ 1.74
CSNK1E-207ENST00000430335 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
CSNK1E-207ENST00000430335 RGL2O15211 777 aa25.93■■□□□ 1.74
CSNK1E-207ENST00000430335 CAMTA2O94983 1202 aa25.93■■□□□ 1.74
CSNK1E-207ENST00000430335 FKBP8Q14318 412 aa25.93■■□□□ 1.74
CSNK1E-207ENST00000430335 BCL2L12Q9HB09 334 aa25.93■■□□□ 1.74
CSNK1E-207ENST00000430335 DBF4Q9UBU7 674 aaPredicted RBP25.93■■□□□ 1.74
CSNK1E-207ENST00000430335 EXOSC9Q06265 439 aaKnown RBP25.92■■□□□ 1.74
CSNK1E-207ENST00000430335 PROSER3Q2NL68 480 aa25.92■■□□□ 1.74
CSNK1E-207ENST00000430335 CHPF2Q9P2E5 772 aa25.92■■□□□ 1.74
CSNK1E-207ENST00000430335 CCDC30Q5VVM6 783 aa25.91■■□□□ 1.74
CSNK1E-207ENST00000430335 ARXQ96QS3 562 aa25.91■■□□□ 1.74
CSNK1E-207ENST00000430335 CLEC4GQ6UXB4 293 aa25.9■■□□□ 1.74
CSNK1E-207ENST00000430335 TRMT2AQ8IZ69 625 aaKnown RBP25.9■■□□□ 1.74
CSNK1E-207ENST00000430335 PPP1R1BQ9UD71 204 aaPredicted RBP25.9■■□□□ 1.74
CSNK1E-207ENST00000430335 ANXA1P04083 346 aa25.89■■□□□ 1.74
CSNK1E-207ENST00000430335 MMP10P09238 476 aa25.89■■□□□ 1.74
CSNK1E-207ENST00000430335 TM4SF1P30408 202 aa25.89■■□□□ 1.74
CSNK1E-207ENST00000430335 CDCA7LQ96GN5 454 aa25.89■■□□□ 1.74
CSNK1E-207ENST00000430335 SCN7AQ01118 1682 aa25.88■■□□□ 1.73
CSNK1E-207ENST00000430335 ERVV-1B6SEH8 477 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms