RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC9-209ENST00000425071 ZDHHC3Q9NYG2 299 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 USTQ9Y2C2 406 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 SERTM1A2A2V5 107 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 H7C1W4 665 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 FOXO3O43524 673 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 WEE1P30291 646 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 NOS2P35228 1153 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 FAM69CQ0P6D2 419 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 TMEM164Q5U3C3 297 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
HDAC9-209ENST00000425071 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-209ENST00000425071 GPC6Q9Y625 555 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-209ENST00000425071 NISCHQ9Y2I1 1504 aa7.41□□□□□ -1.22
HDAC9-209ENST00000425071 TERTO14746 1132 aaKnown RBP7.4□□□□□ -1.22
HDAC9-209ENST00000425071 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-209ENST00000425071 PPFIA3O75145 1194 aa7.4□□□□□ -1.22
HDAC9-209ENST00000425071 TATP17735 454 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-209ENST00000425071 SCG3Q8WXD2 468 aaKnown RBP7.4□□□□□ -1.22
HDAC9-209ENST00000425071 NANOS1Q8WY41 292 aaKnown RBP7.4□□□□□ -1.22
HDAC9-209ENST00000425071 L3MBTL2Q969R5 705 aa7.4□□□□□ -1.22
HDAC9-209ENST00000425071 C21orf2O43822 256 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 ITGA6P23229 1130 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 PHKA2P46019 1235 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 C2orf49Q9BVC5 232 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-209ENST00000425071 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 USP3Q9Y6I4 520 aa7.39□□□□□ -1.23
HDAC9-209ENST00000425071 H3BM21 787 aa7.38□□□□□ -1.23
HDAC9-209ENST00000425071 TRIM22Q8IYM9 498 aa7.38□□□□□ -1.23
HDAC9-209ENST00000425071 PGBD3Q8N328 593 aa7.38□□□□□ -1.23
HDAC9-209ENST00000425071 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
HDAC9-209ENST00000425071 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
HDAC9-209ENST00000425071 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 EML1O00423 815 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 MSX1P28360 303 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 HIF1AQ16665 826 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 COL26A1Q96A83 441 aa7.37□□□□□ -1.23
HDAC9-209ENST00000425071 GAS2L1Q99501 681 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-209ENST00000425071 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 OCLNQ16625 522 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 FOXR1Q6PIV2 292 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 NLRP8Q86W28 1048 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 IRF7Q92985 503 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
HDAC9-209ENST00000425071 TBCELQ5QJ74 424 aa7.35□□□□□ -1.23
HDAC9-209ENST00000425071 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
HDAC9-209ENST00000425071 RIPOR1Q6ZS17 1223 aa7.35□□□□□ -1.23
HDAC9-209ENST00000425071 SV2AQ7L0J3 742 aa7.35□□□□□ -1.23
HDAC9-209ENST00000425071 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-209ENST00000425071 CXXC1Q9P0U4 656 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-209ENST00000425071 PTCD1O75127 700 aaKnown RBP7.34□□□□□ -1.23
HDAC9-209ENST00000425071 ATP4AP20648 1035 aa7.34□□□□□ -1.23
HDAC9-209ENST00000425071 ANKIB1Q9P2G1 1089 aa7.34□□□□□ -1.23
HDAC9-209ENST00000425071 PARP3Q9Y6F1 533 aa7.34□□□□□ -1.23
HDAC9-209ENST00000425071 PRMT3O60678 531 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 WFS1O76024 890 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 ATP2B4P23634 1241 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 NFX1Q12986 1120 aaKnown RBP7.33□□□□□ -1.24
HDAC9-209ENST00000425071 ARSJQ5FYB0 599 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-209ENST00000425071 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 NUCKS1Q9H1E3 243 aaKnown RBP7.33□□□□□ -1.24
HDAC9-209ENST00000425071 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
HDAC9-209ENST00000425071 A0A1W2PNR3 127 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 TXLNAP40222 546 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 DBN1Q16643 649 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 RTN1Q16799 776 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 C7orf43Q8WVR3 580 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-209ENST00000425071 MYO19Q96H55 970 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 TRERF1Q96PN7 1200 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 ZIC5Q96T25 663 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 NEUROD4Q9HD90 331 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 PHF24Q9UPV7 400 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 GJA3Q9Y6H8 435 aa7.32□□□□□ -1.24
HDAC9-209ENST00000425071 CDC14CA4D256 554 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 SSFA2P28290 1259 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-209ENST00000425071 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 VWA5B2Q8N398 1253 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 RHPN1Q8TCX5 695 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 CFHR5Q9BXR6 569 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
HDAC9-209ENST00000425071 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-209ENST00000425071 SH3PXD2AQ5TCZ1 1133 aa7.3□□□□□ -1.24
HDAC9-209ENST00000425071 CUEDC1Q9NWM3 386 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-209ENST00000425071 LGR5O75473 907 aa7.29□□□□□ -1.24
HDAC9-209ENST00000425071 VEGFBP49765 207 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms