RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 GIGYF1O75420 1035 aaPredicted RBP24.16■■□□□ 1.46
HDAC6-205ENST00000423941 STARD3NLO95772 234 aa24.16■■□□□ 1.46
HDAC6-205ENST00000423941 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
HDAC6-205ENST00000423941 TSPYL4Q9UJ04 414 aa24.16■■□□□ 1.46
HDAC6-205ENST00000423941 RTCBQ9Y3I0 505 aaKnown RBP24.16■■□□□ 1.46
HDAC6-205ENST00000423941 USP16Q9Y5T5 823 aa24.16■■□□□ 1.46
HDAC6-205ENST00000423941 PRAMEF22A3QJZ6 481 aa24.15■■□□□ 1.46
HDAC6-205ENST00000423941 ADRA2BP18089 450 aa24.15■■□□□ 1.46
HDAC6-205ENST00000423941 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
HDAC6-205ENST00000423941 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
HDAC6-205ENST00000423941 LAMB4A4D0S4 1761 aa24.14■■□□□ 1.46
HDAC6-205ENST00000423941 SGIP1Q9BQI5 828 aa24.14■■□□□ 1.45
HDAC6-205ENST00000423941 IFT57Q9NWB7 429 aa24.13■■□□□ 1.45
HDAC6-205ENST00000423941 SRCAPQ6ZRS2 3230 aa24.13■■□□□ 1.45
HDAC6-205ENST00000423941 C4AP0C0L4 1744 aa24.13■■□□□ 1.45
HDAC6-205ENST00000423941 SOS1Q07889 1333 aaPredicted RBP24.12■■□□□ 1.45
HDAC6-205ENST00000423941 ARHGEF1Q92888 912 aaKnown RBP24.12■■□□□ 1.45
HDAC6-205ENST00000423941 SPON1Q9HCB6 807 aa24.12■■□□□ 1.45
HDAC6-205ENST00000423941 ZBTB1Q9Y2K1 713 aa24.12■■□□□ 1.45
HDAC6-205ENST00000423941 ZBTB7AO95365 584 aa24.11■■□□□ 1.45
HDAC6-205ENST00000423941 PTGER2P43116 358 aa24.11■■□□□ 1.45
HDAC6-205ENST00000423941 EIF5P55010 431 aaKnown RBP24.11■■□□□ 1.45
HDAC6-205ENST00000423941 GNAI1P63096 354 aa24.11■■□□□ 1.45
HDAC6-205ENST00000423941 TRAPPC3LQ5T215 181 aa24.11■■□□□ 1.45
HDAC6-205ENST00000423941 IL16Q14005 1332 aa24.1■■□□□ 1.45
HDAC6-205ENST00000423941 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
HDAC6-205ENST00000423941 PHF14O94880 888 aa24.09■■□□□ 1.45
HDAC6-205ENST00000423941 A1BGP04217 495 aa24.09■■□□□ 1.45
HDAC6-205ENST00000423941 MBIPQ9NS73 344 aa24.09■■□□□ 1.45
HDAC6-205ENST00000423941 ZNF521Q96K83 1311 aa24.09■■□□□ 1.45
HDAC6-205ENST00000423941 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
HDAC6-205ENST00000423941 ATF5Q9Y2D1 282 aaPredicted RBP24.08■■□□□ 1.45
HDAC6-205ENST00000423941 IL6STP40189 918 aaPredicted RBP24.07■■□□□ 1.44
HDAC6-205ENST00000423941 LAS1LQ9Y4W2 734 aaKnown RBP24.07■■□□□ 1.44
HDAC6-205ENST00000423941 NBPF26B4DH59 902 aa24.05■■□□□ 1.44
HDAC6-205ENST00000423941 CANXP27824 592 aaKnown RBP24.05■■□□□ 1.44
HDAC6-205ENST00000423941 NBPF10Q6P3W6 841 aaKnown RBP24.05■■□□□ 1.44
HDAC6-205ENST00000423941 NBPF15Q8N660 670 aa24.05■■□□□ 1.44
HDAC6-205ENST00000423941 COL15A1P39059 1388 aa24.04■■□□□ 1.44
HDAC6-205ENST00000423941 MSH5O43196 834 aa24.04■■□□□ 1.44
HDAC6-205ENST00000423941 HOXB7P09629 217 aa24.04■■□□□ 1.44
HDAC6-205ENST00000423941 RFC4P35249 363 aa24.04■■□□□ 1.44
HDAC6-205ENST00000423941 KRT24Q2M2I5 525 aa24.04■■□□□ 1.44
HDAC6-205ENST00000423941 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
HDAC6-205ENST00000423941 GYS1P13807 737 aa24.03■■□□□ 1.44
HDAC6-205ENST00000423941 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
HDAC6-205ENST00000423941 NARFQ9UHQ1 456 aa24.02■■□□□ 1.44
HDAC6-205ENST00000423941 ERBB4Q15303 1308 aa24.02■■□□□ 1.44
HDAC6-205ENST00000423941 A0A087WZG4 1122 aa24■■□□□ 1.43
HDAC6-205ENST00000423941 PDIA6Q15084 440 aa24■■□□□ 1.43
HDAC6-205ENST00000423941 LRP10Q7Z4F1 713 aa24■■□□□ 1.43
HDAC6-205ENST00000423941 NLGN1Q8N2Q7 840 aa24■■□□□ 1.43
HDAC6-205ENST00000423941 SRP68Q9UHB9 627 aaKnown RBP24■■□□□ 1.43
HDAC6-205ENST00000423941 BCL2L12Q9HB09 334 aa23.99■■□□□ 1.43
HDAC6-205ENST00000423941 SPINK5Q9NQ38 1064 aaPredicted RBP23.99■■□□□ 1.43
HDAC6-205ENST00000423941 PIP4K2AP48426 406 aaPredicted RBP23.98■■□□□ 1.43
HDAC6-205ENST00000423941 DUSP27Q5VZP5 1158 aa23.98■■□□□ 1.43
HDAC6-205ENST00000423941 MSL1Q68DK7 614 aa23.98■■□□□ 1.43
HDAC6-205ENST00000423941 C8orf58Q8NAV2 365 aa23.98■■□□□ 1.43
HDAC6-205ENST00000423941 SCN7AQ01118 1682 aa23.97■■□□□ 1.43
HDAC6-205ENST00000423941 TSR2Q969E8 191 aaKnown RBP23.97■■□□□ 1.43
HDAC6-205ENST00000423941 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
HDAC6-205ENST00000423941 RGL2O15211 777 aa23.96■■□□□ 1.43
HDAC6-205ENST00000423941 ZPR1O75312 459 aa23.96■■□□□ 1.43
HDAC6-205ENST00000423941 TM4SF1P30408 202 aa23.96■■□□□ 1.43
HDAC6-205ENST00000423941 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
HDAC6-205ENST00000423941 POLD1P28340 1107 aa23.95■■□□□ 1.42
HDAC6-205ENST00000423941 FKBP8Q14318 412 aa23.95■■□□□ 1.42
HDAC6-205ENST00000423941 ARXQ96QS3 562 aa23.95■■□□□ 1.42
HDAC6-205ENST00000423941 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
HDAC6-205ENST00000423941 CAMTA2O94983 1202 aa23.94■■□□□ 1.42
HDAC6-205ENST00000423941 EIF2S2P20042 333 aaKnown RBP23.94■■□□□ 1.42
HDAC6-205ENST00000423941 TSPYL6Q8N831 410 aa23.94■■□□□ 1.42
HDAC6-205ENST00000423941 TBC1D2BQ9UPU7 963 aa23.94■■□□□ 1.42
HDAC6-205ENST00000423941 DZIP3Q86Y13 1208 aaKnown RBP23.93■■□□□ 1.42
HDAC6-205ENST00000423941 DDX21Q9NR30 783 aaKnown RBP eCLIP23.93■■□□□ 1.42
HDAC6-205ENST00000423941 MMP10P09238 476 aa23.91■■□□□ 1.42
HDAC6-205ENST00000423941 GOLGA2Q08379 1002 aa23.91■■□□□ 1.42
HDAC6-205ENST00000423941 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
HDAC6-205ENST00000423941 HDGFL1Q5TGJ6 251 aa23.91■■□□□ 1.42
HDAC6-205ENST00000423941 CLEC4GQ6UXB4 293 aa23.91■■□□□ 1.42
HDAC6-205ENST00000423941 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
HDAC6-205ENST00000423941 MYH16Q9H6N6 1097 aa23.9■■□□□ 1.42
HDAC6-205ENST00000423941 ZNF330Q9Y3S2 320 aaPredicted RBP23.9■■□□□ 1.42
HDAC6-205ENST00000423941 ERVV-1B6SEH8 477 aa23.89■■□□□ 1.41
HDAC6-205ENST00000423941 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-205ENST00000423941 MYL6BP14649 208 aa23.89■■□□□ 1.41
HDAC6-205ENST00000423941 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
HDAC6-205ENST00000423941 DBF4Q9UBU7 674 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-205ENST00000423941 PPP1R1BQ9UD71 204 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-205ENST00000423941 NRXN2Q9P2S2 1712 aa23.89■■□□□ 1.41
HDAC6-205ENST00000423941 NUP98P52948 1817 aa23.89■■□□□ 1.41
HDAC6-205ENST00000423941 KIF13BQ9NQT8 1826 aa23.89■■□□□ 1.41
HDAC6-205ENST00000423941 SLFN5Q08AF3 891 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 NFIXQ14938 502 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 TTLL7Q6ZT98 887 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
HDAC6-205ENST00000423941 ANXA1P04083 346 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms