RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 ZNF853P0CG23 659 aa18.9■□□□□ 0.62
PTPN18-204ENST00000420717 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
PTPN18-204ENST00000420717 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
PTPN18-204ENST00000420717 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
PTPN18-204ENST00000420717 STARD3NLO95772 234 aa18.89■□□□□ 0.61
PTPN18-204ENST00000420717 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
PTPN18-204ENST00000420717 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
PTPN18-204ENST00000420717 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
PTPN18-204ENST00000420717 PTGER2P43116 358 aa18.88■□□□□ 0.61
PTPN18-204ENST00000420717 SPON1Q9HCB6 807 aa18.88■□□□□ 0.61
PTPN18-204ENST00000420717 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
PTPN18-204ENST00000420717 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
PTPN18-204ENST00000420717 IL16Q14005 1332 aa18.87■□□□□ 0.61
PTPN18-204ENST00000420717 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
PTPN18-204ENST00000420717 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
PTPN18-204ENST00000420717 ZBTB1Q9Y2K1 713 aa18.87■□□□□ 0.61
PTPN18-204ENST00000420717 COL15A1P39059 1388 aa18.86■□□□□ 0.61
PTPN18-204ENST00000420717 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
PTPN18-204ENST00000420717 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
PTPN18-204ENST00000420717 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
PTPN18-204ENST00000420717 ERBB4Q15303 1308 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 ZNF521Q96K83 1311 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 HOXB7P09629 217 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
PTPN18-204ENST00000420717 EIF5P55010 431 aaKnown RBP18.84■□□□□ 0.61
PTPN18-204ENST00000420717 GNAI1P63096 354 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 MIER1Q8N108 512 aa18.84■□□□□ 0.61
PTPN18-204ENST00000420717 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
PTPN18-204ENST00000420717 PRAMEF22A3QJZ6 481 aa18.83■□□□□ 0.6
PTPN18-204ENST00000420717 PHF14O94880 888 aa18.83■□□□□ 0.6
PTPN18-204ENST00000420717 ARHGEF1Q92888 912 aaKnown RBP18.83■□□□□ 0.6
PTPN18-204ENST00000420717 USP16Q9Y5T5 823 aa18.83■□□□□ 0.6
PTPN18-204ENST00000420717 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
PTPN18-204ENST00000420717 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
PTPN18-204ENST00000420717 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
PTPN18-204ENST00000420717 KIF13BQ9NQT8 1826 aa18.8■□□□□ 0.6
PTPN18-204ENST00000420717 RGL2O15211 777 aa18.8■□□□□ 0.6
PTPN18-204ENST00000420717 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
PTPN18-204ENST00000420717 A0A087WZG4 1122 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 A1BGP04217 495 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 GYS1P13807 737 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
PTPN18-204ENST00000420717 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
PTPN18-204ENST00000420717 RFC4P35249 363 aa18.78■□□□□ 0.6
PTPN18-204ENST00000420717 ATF5Q9Y2D1 282 aaPredicted RBP18.78■□□□□ 0.6
PTPN18-204ENST00000420717 MSH5O43196 834 aa18.77■□□□□ 0.6
PTPN18-204ENST00000420717 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
PTPN18-204ENST00000420717 POLD1P28340 1107 aa18.77■□□□□ 0.6
PTPN18-204ENST00000420717 NLGN1Q8N2Q7 840 aa18.77■□□□□ 0.6
PTPN18-204ENST00000420717 LRP10Q7Z4F1 713 aa18.76■□□□□ 0.59
PTPN18-204ENST00000420717 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
PTPN18-204ENST00000420717 PDIA6Q15084 440 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 KRT24Q2M2I5 525 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 ARXQ96QS3 562 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
PTPN18-204ENST00000420717 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
PTPN18-204ENST00000420717 ZPR1O75312 459 aa18.73■□□□□ 0.59
PTPN18-204ENST00000420717 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
PTPN18-204ENST00000420717 C10orf71Q711Q0 1435 aa18.73■□□□□ 0.59
PTPN18-204ENST00000420717 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
PTPN18-204ENST00000420717 FKBP8Q14318 412 aa18.72■□□□□ 0.59
PTPN18-204ENST00000420717 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
PTPN18-204ENST00000420717 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
PTPN18-204ENST00000420717 NUP98P52948 1817 aa18.72■□□□□ 0.59
PTPN18-204ENST00000420717 TM4SF1P30408 202 aa18.71■□□□□ 0.59
PTPN18-204ENST00000420717 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
PTPN18-204ENST00000420717 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTPN18-204ENST00000420717 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 CACNA1FO60840 1977 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 MMP10P09238 476 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
PTPN18-204ENST00000420717 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 CLEC4GQ6UXB4 293 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
PTPN18-204ENST00000420717 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
PTPN18-204ENST00000420717 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
PTPN18-204ENST00000420717 PPP1R1BQ9UD71 204 aaPredicted RBP18.7■□□□□ 0.58
PTPN18-204ENST00000420717 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
PTPN18-204ENST00000420717 NPM2Q86SE8 214 aaKnown RBP18.69■□□□□ 0.58
PTPN18-204ENST00000420717 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
PTPN18-204ENST00000420717 ERVV-1B6SEH8 477 aa18.68■□□□□ 0.58
PTPN18-204ENST00000420717 DDR1Q08345 913 aa18.68■□□□□ 0.58
PTPN18-204ENST00000420717 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
PTPN18-204ENST00000420717 TBC1D2BQ9UPU7 963 aa18.68■□□□□ 0.58
PTPN18-204ENST00000420717 CD2APQ9Y5K6 639 aa18.68■□□□□ 0.58
PTPN18-204ENST00000420717 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
PTPN18-204ENST00000420717 EIF2S2P20042 333 aaKnown RBP18.67■□□□□ 0.58
PTPN18-204ENST00000420717 NFIXQ14938 502 aa18.67■□□□□ 0.58
PTPN18-204ENST00000420717 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
PTPN18-204ENST00000420717 FHDC1Q9C0D6 1143 aaPredicted RBP18.67■□□□□ 0.58
PTPN18-204ENST00000420717 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
PTPN18-204ENST00000420717 MAP3K15Q6ZN16 1313 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms