RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PHF14O94880 888 aa23.09■■□□□ 1.29
EPCAM-203ENST00000419334 SNRPA1P09661 255 aaKnown RBP23.09■■□□□ 1.29
EPCAM-203ENST00000419334 ADRA2BP18089 450 aa23.09■■□□□ 1.29
EPCAM-203ENST00000419334 EIF4A1P60842 406 aaKnown RBP23.09■■□□□ 1.29
EPCAM-203ENST00000419334 CHL1O00533 1208 aa23.08■■□□□ 1.29
EPCAM-203ENST00000419334 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.29
EPCAM-203ENST00000419334 MIER1Q8N108 512 aa23.08■■□□□ 1.29
EPCAM-203ENST00000419334 MSH5O43196 834 aa23.07■■□□□ 1.28
EPCAM-203ENST00000419334 TRAPPC3LQ5T215 181 aa23.07■■□□□ 1.28
EPCAM-203ENST00000419334 SMIM5Q71RC9 77 aa23.07■■□□□ 1.28
EPCAM-203ENST00000419334 CFAP44Q96MT7 982 aa23.07■■□□□ 1.28
EPCAM-203ENST00000419334 SRCAPQ6ZRS2 3230 aa23.06■■□□□ 1.28
EPCAM-203ENST00000419334 ZBTB1Q9Y2K1 713 aa23.06■■□□□ 1.28
EPCAM-203ENST00000419334 PRAMEF22A3QJZ6 481 aa23.05■■□□□ 1.28
EPCAM-203ENST00000419334 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-203ENST00000419334 ATF5Q9Y2D1 282 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-203ENST00000419334 USP16Q9Y5T5 823 aa23.05■■□□□ 1.28
EPCAM-203ENST00000419334 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-203ENST00000419334 ZNF853P0CG23 659 aa23.04■■□□□ 1.28
EPCAM-203ENST00000419334 WWC1Q8IX03 1113 aa23.04■■□□□ 1.28
EPCAM-203ENST00000419334 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
EPCAM-203ENST00000419334 IFT57Q9NWB7 429 aa23.04■■□□□ 1.28
EPCAM-203ENST00000419334 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
EPCAM-203ENST00000419334 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
EPCAM-203ENST00000419334 PTGER2P43116 358 aa23.03■■□□□ 1.28
EPCAM-203ENST00000419334 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
EPCAM-203ENST00000419334 SGIP1Q9BQI5 828 aa23.03■■□□□ 1.28
EPCAM-203ENST00000419334 GNAI1P63096 354 aa23.02■■□□□ 1.28
EPCAM-203ENST00000419334 COL15A1P39059 1388 aa23.01■■□□□ 1.27
EPCAM-203ENST00000419334 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
EPCAM-203ENST00000419334 RFC4P35249 363 aa23.01■■□□□ 1.27
EPCAM-203ENST00000419334 A1BGP04217 495 aa23■■□□□ 1.27
EPCAM-203ENST00000419334 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
EPCAM-203ENST00000419334 EIF5P55010 431 aaKnown RBP23■■□□□ 1.27
EPCAM-203ENST00000419334 MBIPQ9NS73 344 aa23■■□□□ 1.27
EPCAM-203ENST00000419334 IL16Q14005 1332 aa22.99■■□□□ 1.27
EPCAM-203ENST00000419334 POLD1P28340 1107 aa22.98■■□□□ 1.27
EPCAM-203ENST00000419334 USP42Q9H9J4 1324 aaKnown RBP22.98■■□□□ 1.27
EPCAM-203ENST00000419334 MSL1Q68DK7 614 aa22.97■■□□□ 1.27
EPCAM-203ENST00000419334 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
EPCAM-203ENST00000419334 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
EPCAM-203ENST00000419334 A0A087WZG4 1122 aa22.95■■□□□ 1.26
EPCAM-203ENST00000419334 HOXB7P09629 217 aa22.95■■□□□ 1.26
EPCAM-203ENST00000419334 GYS1P13807 737 aa22.95■■□□□ 1.26
EPCAM-203ENST00000419334 SCN7AQ01118 1682 aa22.95■■□□□ 1.26
EPCAM-203ENST00000419334 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
EPCAM-203ENST00000419334 NARFQ9UHQ1 456 aa22.95■■□□□ 1.26
EPCAM-203ENST00000419334 ERBB4Q15303 1308 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 NBPF26B4DH59 902 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 KRT24Q2M2I5 525 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 NBPF10Q6P3W6 841 aaKnown RBP22.94■■□□□ 1.26
EPCAM-203ENST00000419334 NLGN1Q8N2Q7 840 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 NBPF15Q8N660 670 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 SRP68Q9UHB9 627 aaKnown RBP22.94■■□□□ 1.26
EPCAM-203ENST00000419334 BCORQ6W2J9 1755 aa22.94■■□□□ 1.26
EPCAM-203ENST00000419334 ZPR1O75312 459 aa22.93■■□□□ 1.26
EPCAM-203ENST00000419334 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
EPCAM-203ENST00000419334 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
EPCAM-203ENST00000419334 ARXQ96QS3 562 aa22.93■■□□□ 1.26
EPCAM-203ENST00000419334 ZNF521Q96K83 1311 aa22.92■■□□□ 1.26
EPCAM-203ENST00000419334 ZNF330Q9Y3S2 320 aaPredicted RBP22.92■■□□□ 1.26
EPCAM-203ENST00000419334 USPL1Q5W0Q7 1092 aa22.91■■□□□ 1.26
EPCAM-203ENST00000419334 EIF2S2P20042 333 aaKnown RBP22.9■■□□□ 1.26
EPCAM-203ENST00000419334 DUSP27Q5VZP5 1158 aa22.9■■□□□ 1.26
EPCAM-203ENST00000419334 TSR2Q969E8 191 aaKnown RBP22.9■■□□□ 1.26
EPCAM-203ENST00000419334 FKBP8Q14318 412 aa22.89■■□□□ 1.25
EPCAM-203ENST00000419334 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.25
EPCAM-203ENST00000419334 DZIP3Q86Y13 1208 aaKnown RBP22.88■■□□□ 1.25
EPCAM-203ENST00000419334 TBC1D2BQ9UPU7 963 aa22.88■■□□□ 1.25
EPCAM-203ENST00000419334 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
EPCAM-203ENST00000419334 MMP10P09238 476 aa22.87■■□□□ 1.25
EPCAM-203ENST00000419334 PDIA6Q15084 440 aa22.87■■□□□ 1.25
EPCAM-203ENST00000419334 HDGFL1Q5TGJ6 251 aa22.87■■□□□ 1.25
EPCAM-203ENST00000419334 CAMTA2O94983 1202 aa22.86■■□□□ 1.25
EPCAM-203ENST00000419334 C8orf58Q8NAV2 365 aa22.86■■□□□ 1.25
EPCAM-203ENST00000419334 RGL2O15211 777 aa22.85■■□□□ 1.25
EPCAM-203ENST00000419334 MYL6BP14649 208 aa22.85■■□□□ 1.25
EPCAM-203ENST00000419334 LRP10Q7Z4F1 713 aa22.85■■□□□ 1.25
EPCAM-203ENST00000419334 FHDC1Q9C0D6 1143 aaPredicted RBP22.85■■□□□ 1.25
EPCAM-203ENST00000419334 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
EPCAM-203ENST00000419334 TM4SF1P30408 202 aa22.84■■□□□ 1.25
EPCAM-203ENST00000419334 NECTIN2Q92692 538 aa22.84■■□□□ 1.25
EPCAM-203ENST00000419334 MYH16Q9H6N6 1097 aa22.84■■□□□ 1.25
EPCAM-203ENST00000419334 DDX21Q9NR30 783 aaKnown RBP eCLIP22.84■■□□□ 1.25
EPCAM-203ENST00000419334 KIF13BQ9NQT8 1826 aa22.83■■□□□ 1.25
EPCAM-203ENST00000419334 ELL2O00472 640 aaPredicted RBP22.83■■□□□ 1.25
EPCAM-203ENST00000419334 PROSER3Q2NL68 480 aa22.83■■□□□ 1.25
EPCAM-203ENST00000419334 TSPYL6Q8N831 410 aa22.83■■□□□ 1.25
EPCAM-203ENST00000419334 PARP3Q9Y6F1 533 aa22.83■■□□□ 1.25
EPCAM-203ENST00000419334 NRXN2Q9P2S2 1712 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 NUP98P52948 1817 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 AFDNP55196 1824 aaKnown RBP22.82■■□□□ 1.24
EPCAM-203ENST00000419334 DDR1Q08345 913 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 NFIXQ14938 502 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 CLEC4GQ6UXB4 293 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 SYT17Q9BSW7 474 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 CHMP4AQ9BY43 222 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 CHPF2Q9P2E5 772 aa22.82■■□□□ 1.24
EPCAM-203ENST00000419334 DBF4Q9UBU7 674 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms