RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 COL23A1Q86Y22 540 aaPredicted RBP22.84■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 CASZ1Q86V15 1759 aa22.84■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 UBR3Q6ZT12 1888 aa22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 MYH14Q7Z406 1995 aaKnown RBP22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 AMIGO3Q86WK7 504 aa22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 PDGFDQ9GZP0 370 aaPredicted RBP22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 MBIPQ9NS73 344 aa22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 ZNF521Q96K83 1311 aa22.82■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 TRAPPC3LQ5T215 181 aa22.82■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 TUBGCP6Q96RT7 1819 aa22.82■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 PRAMEF22A3QJZ6 481 aa22.81■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 HOXB7P09629 217 aa22.8■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 MTFR1LQ9H019 292 aa22.8■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 IL6STP40189 918 aaPredicted RBP22.79■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 EIF5P55010 431 aaKnown RBP22.79■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 ARHGEF1Q92888 912 aaKnown RBP22.79■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 PHF14O94880 888 aa22.77■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 A1BGP04217 495 aa22.77■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 SPON1Q9HCB6 807 aa22.77■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
COMMD3-BMI1-201ENST00000417470 A0A087WZG4 1122 aa22.75■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 RFC4P35249 363 aa22.75■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 SMIM5Q71RC9 77 aa22.75■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 MSH5O43196 834 aa22.74■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 ZBTB7AO95365 584 aa22.74■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 LAMB4A4D0S4 1761 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 SGIP1Q9BQI5 828 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 CHMP4AQ9BY43 222 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 COL15A1P39059 1388 aa22.73■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 COL24A1Q17RW2 1714 aa22.72■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 DUSP27Q5VZP5 1158 aa22.72■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 PTGER2P43116 358 aa22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 MYH16Q9H6N6 1097 aa22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
COMMD3-BMI1-201ENST00000417470 NLGN1Q8N2Q7 840 aa22.7■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 LRP5O75197 1615 aa22.7■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 RGL2O15211 777 aa22.69■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 GYS1P13807 737 aa22.69■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 PDIA6Q15084 440 aa22.69■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 E9PSI1 815 aa22.68■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 ZPR1O75312 459 aa22.68■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 POLD1P28340 1107 aa22.67■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 HDGFL1Q5TGJ6 251 aa22.67■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 LRP10Q7Z4F1 713 aa22.67■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 DDX21Q9NR30 783 aaKnown RBP eCLIP22.67■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 C4AP0C0L4 1744 aa22.67■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 SRP68Q9UHB9 627 aaKnown RBP22.66■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 PIP4K2AP48426 406 aaPredicted RBP22.65■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 USPL1Q5W0Q7 1092 aa22.65■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 TRMT2AQ8IZ69 625 aaKnown RBP22.65■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 TSPYL6Q8N831 410 aa22.65■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 DBF4Q9UBU7 674 aaPredicted RBP22.65■■□□□ 1.22
COMMD3-BMI1-201ENST00000417470 CAMTA2O94983 1202 aa22.64■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 TWISTNBQ3B726 338 aaPredicted RBP22.64■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 CLEC4GQ6UXB4 293 aa22.64■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 DZIP3Q86Y13 1208 aaKnown RBP22.64■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 BCL2L12Q9HB09 334 aa22.64■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 TBC1D2BQ9UPU7 963 aa22.63■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ZNF330Q9Y3S2 320 aaPredicted RBP22.63■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ERVV-1B6SEH8 477 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 MYL6BP14649 208 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 TM4SF1P30408 202 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 HNRNPUQ00839 825 aaKnown RBP eCLIP22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 FKBP8Q14318 412 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 CCDC30Q5VVM6 783 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ARXQ96QS3 562 aa22.62■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 VAMP4O75379 141 aa22.61■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 PROSER3Q2NL68 480 aa22.61■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 HYPKQ9NX55 129 aa22.61■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 CHPF2Q9P2E5 772 aa22.61■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 NECTIN2Q92692 538 aa22.6■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 MMP10P09238 476 aa22.59■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 CDCA7LQ96GN5 454 aa22.59■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 MAP3K15Q6ZN16 1313 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms