RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
LINC00398-201ENST00000414407 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
LINC00398-201ENST00000414407 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
LINC00398-201ENST00000414407 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.02
LINC00398-201ENST00000414407 USP16Q9Y5T5 823 aa21.45■■□□□ 1.02
LINC00398-201ENST00000414407 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
LINC00398-201ENST00000414407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.44■■□□□ 1.02
LINC00398-201ENST00000414407 COL23A1Q86Y22 540 aaPredicted RBP21.44■■□□□ 1.02
LINC00398-201ENST00000414407 CASZ1Q86V15 1759 aa21.43■■□□□ 1.02
LINC00398-201ENST00000414407 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
LINC00398-201ENST00000414407 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
LINC00398-201ENST00000414407 ZNF521Q96K83 1311 aa21.43■■□□□ 1.02
LINC00398-201ENST00000414407 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
LINC00398-201ENST00000414407 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
LINC00398-201ENST00000414407 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
LINC00398-201ENST00000414407 PDGFDQ9GZP0 370 aaPredicted RBP21.42■■□□□ 1.02
LINC00398-201ENST00000414407 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
LINC00398-201ENST00000414407 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
LINC00398-201ENST00000414407 HOXB7P09629 217 aa21.41■■□□□ 1.02
LINC00398-201ENST00000414407 PHF14O94880 888 aa21.4■■□□□ 1.02
LINC00398-201ENST00000414407 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
LINC00398-201ENST00000414407 MTFR1LQ9H019 292 aa21.4■■□□□ 1.02
LINC00398-201ENST00000414407 A1BGP04217 495 aa21.39■■□□□ 1.01
LINC00398-201ENST00000414407 IL6STP40189 918 aaPredicted RBP21.39■■□□□ 1.01
LINC00398-201ENST00000414407 EIF5P55010 431 aaKnown RBP21.39■■□□□ 1.01
LINC00398-201ENST00000414407 ERBB4Q15303 1308 aa21.38■■□□□ 1.01
LINC00398-201ENST00000414407 MSH5O43196 834 aa21.38■■□□□ 1.01
LINC00398-201ENST00000414407 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
LINC00398-201ENST00000414407 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
LINC00398-201ENST00000414407 A0A087WZG4 1122 aa21.37■■□□□ 1.01
LINC00398-201ENST00000414407 RFC4P35249 363 aa21.37■■□□□ 1.01
LINC00398-201ENST00000414407 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
LINC00398-201ENST00000414407 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
LINC00398-201ENST00000414407 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
LINC00398-201ENST00000414407 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
LINC00398-201ENST00000414407 COL15A1P39059 1388 aa21.36■■□□□ 1.01
LINC00398-201ENST00000414407 ZBTB7AO95365 584 aa21.35■■□□□ 1.01
LINC00398-201ENST00000414407 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
LINC00398-201ENST00000414407 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
LINC00398-201ENST00000414407 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
LINC00398-201ENST00000414407 TSR2Q969E8 191 aaKnown RBP21.35■■□□□ 1.01
LINC00398-201ENST00000414407 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
LINC00398-201ENST00000414407 NBPF26B4DH59 902 aa21.34■■□□□ 1.01
LINC00398-201ENST00000414407 NBPF10Q6P3W6 841 aaKnown RBP21.34■■□□□ 1.01
LINC00398-201ENST00000414407 NPM2Q86SE8 214 aaKnown RBP21.34■■□□□ 1.01
LINC00398-201ENST00000414407 NBPF15Q8N660 670 aa21.34■■□□□ 1.01
LINC00398-201ENST00000414407 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
LINC00398-201ENST00000414407 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
LINC00398-201ENST00000414407 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
LINC00398-201ENST00000414407 E9PSI1 815 aa21.32■■□□□ 1
LINC00398-201ENST00000414407 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
LINC00398-201ENST00000414407 C8orf58Q8NAV2 365 aa21.32■■□□□ 1
LINC00398-201ENST00000414407 ATF5Q9Y2D1 282 aaPredicted RBP21.32■■□□□ 1
LINC00398-201ENST00000414407 LRP5O75197 1615 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 ZPR1O75312 459 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 COL24A1Q17RW2 1714 aa21.31■■□□□ 1
LINC00398-201ENST00000414407 C4AP0C0L4 1744 aa21.3■■□□□ 1
LINC00398-201ENST00000414407 GYS1P13807 737 aa21.3■■□□□ 1
LINC00398-201ENST00000414407 PTGER2P43116 358 aa21.3■■□□□ 1
LINC00398-201ENST00000414407 PDIA6Q15084 440 aa21.3■■□□□ 1
LINC00398-201ENST00000414407 RGL2O15211 777 aa21.29■■□□□ 1
LINC00398-201ENST00000414407 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
LINC00398-201ENST00000414407 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
LINC00398-201ENST00000414407 SLFN5Q08AF3 891 aa21.29■■□□□ 1
LINC00398-201ENST00000414407 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
LINC00398-201ENST00000414407 DBF4Q9UBU7 674 aaPredicted RBP21.29■■□□□ 1
LINC00398-201ENST00000414407 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
LINC00398-201ENST00000414407 ELL2O00472 640 aaPredicted RBP21.28■■□□□ 1
LINC00398-201ENST00000414407 POLD1P28340 1107 aa21.28■■□□□ 1
LINC00398-201ENST00000414407 TWISTNBQ3B726 338 aaPredicted RBP21.28■■□□□ 1
LINC00398-201ENST00000414407 USPL1Q5W0Q7 1092 aa21.28■■□□□ 1
LINC00398-201ENST00000414407 TSPYL6Q8N831 410 aa21.28■■□□□ 1
LINC00398-201ENST00000414407 SRP68Q9UHB9 627 aaKnown RBP21.28■■□□□ 1
LINC00398-201ENST00000414407 LRP10Q7Z4F1 713 aa21.27■■□□□ 1
LINC00398-201ENST00000414407 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
LINC00398-201ENST00000414407 MYL6BP14649 208 aa21.26■□□□□ 0.99
LINC00398-201ENST00000414407 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
LINC00398-201ENST00000414407 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
LINC00398-201ENST00000414407 MSL1Q68DK7 614 aa21.26■□□□□ 0.99
LINC00398-201ENST00000414407 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
LINC00398-201ENST00000414407 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
LINC00398-201ENST00000414407 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
LINC00398-201ENST00000414407 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
LINC00398-201ENST00000414407 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
LINC00398-201ENST00000414407 CHPF2Q9P2E5 772 aa21.25■□□□□ 0.99
LINC00398-201ENST00000414407 VAMP4O75379 141 aa21.24■□□□□ 0.99
LINC00398-201ENST00000414407 FKBP8Q14318 412 aa21.24■□□□□ 0.99
LINC00398-201ENST00000414407 PROSER3Q2NL68 480 aa21.24■□□□□ 0.99
LINC00398-201ENST00000414407 BCL2L12Q9HB09 334 aa21.24■□□□□ 0.99
LINC00398-201ENST00000414407 HYPKQ9NX55 129 aa21.24■□□□□ 0.99
LINC00398-201ENST00000414407 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
LINC00398-201ENST00000414407 CDCA7LQ96GN5 454 aa21.23■□□□□ 0.99
LINC00398-201ENST00000414407 ARXQ96QS3 562 aa21.23■□□□□ 0.99
LINC00398-201ENST00000414407 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
LINC00398-201ENST00000414407 MMP10P09238 476 aa21.22■□□□□ 0.99
LINC00398-201ENST00000414407 TM4SF1P30408 202 aa21.22■□□□□ 0.99
LINC00398-201ENST00000414407 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms