RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-206ENST00000414317 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
SNCAIP-206ENST00000414317 ADRA2BP18089 450 aa17.62■□□□□ 0.41
SNCAIP-206ENST00000414317 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-206ENST00000414317 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-206ENST00000414317 LAS1LQ9Y4W2 734 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-206ENST00000414317 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
SNCAIP-206ENST00000414317 ZBTB1Q9Y2K1 713 aa17.6■□□□□ 0.41
SNCAIP-206ENST00000414317 COL24A1Q17RW2 1714 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 CHL1O00533 1208 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 MIER1Q8N108 512 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 USP16Q9Y5T5 823 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
SNCAIP-206ENST00000414317 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.41
SNCAIP-206ENST00000414317 RFC4P35249 363 aa17.58■□□□□ 0.41
SNCAIP-206ENST00000414317 PTGER2P43116 358 aa17.58■□□□□ 0.41
SNCAIP-206ENST00000414317 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.41
SNCAIP-206ENST00000414317 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 A1BGP04217 495 aa17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
SNCAIP-206ENST00000414317 POLD1P28340 1107 aa17.56■□□□□ 0.4
SNCAIP-206ENST00000414317 GNAI1P63096 354 aa17.56■□□□□ 0.4
SNCAIP-206ENST00000414317 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
SNCAIP-206ENST00000414317 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-206ENST00000414317 COL15A1P39059 1388 aa17.56■□□□□ 0.4
SNCAIP-206ENST00000414317 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
SNCAIP-206ENST00000414317 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
SNCAIP-206ENST00000414317 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-206ENST00000414317 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-206ENST00000414317 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
SNCAIP-206ENST00000414317 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 A0A087WZG4 1122 aa17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 ZPR1O75312 459 aa17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 ARXQ96QS3 562 aa17.53■□□□□ 0.4
SNCAIP-206ENST00000414317 GYS1P13807 737 aa17.52■□□□□ 0.39
SNCAIP-206ENST00000414317 PIP4K2AP48426 406 aaPredicted RBP17.52■□□□□ 0.39
SNCAIP-206ENST00000414317 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.39
SNCAIP-206ENST00000414317 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.39
SNCAIP-206ENST00000414317 NARFQ9UHQ1 456 aa17.52■□□□□ 0.39
SNCAIP-206ENST00000414317 IL16Q14005 1332 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
SNCAIP-206ENST00000414317 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-206ENST00000414317 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
SNCAIP-206ENST00000414317 HOXB7P09629 217 aa17.49■□□□□ 0.39
SNCAIP-206ENST00000414317 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
SNCAIP-206ENST00000414317 FKBP8Q14318 412 aa17.48■□□□□ 0.39
SNCAIP-206ENST00000414317 MMP10P09238 476 aa17.47■□□□□ 0.39
SNCAIP-206ENST00000414317 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
SNCAIP-206ENST00000414317 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-206ENST00000414317 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-206ENST00000414317 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
SNCAIP-206ENST00000414317 MYL6BP14649 208 aa17.46■□□□□ 0.39
SNCAIP-206ENST00000414317 FHDC1Q9C0D6 1143 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-206ENST00000414317 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
SNCAIP-206ENST00000414317 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
SNCAIP-206ENST00000414317 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
SNCAIP-206ENST00000414317 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
SNCAIP-206ENST00000414317 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
SNCAIP-206ENST00000414317 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
SNCAIP-206ENST00000414317 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
SNCAIP-206ENST00000414317 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
SNCAIP-206ENST00000414317 PDIA6Q15084 440 aa17.44■□□□□ 0.38
SNCAIP-206ENST00000414317 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
SNCAIP-206ENST00000414317 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
SNCAIP-206ENST00000414317 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
SNCAIP-206ENST00000414317 TM4SF1P30408 202 aa17.43■□□□□ 0.38
SNCAIP-206ENST00000414317 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
SNCAIP-206ENST00000414317 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
SNCAIP-206ENST00000414317 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNCAIP-206ENST00000414317 ANXA1P04083 346 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 DDR1Q08345 913 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 NFIXQ14938 502 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
SNCAIP-206ENST00000414317 RGL2O15211 777 aa17.4■□□□□ 0.38
SNCAIP-206ENST00000414317 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
SNCAIP-206ENST00000414317 TTLL7Q6ZT98 887 aa17.4■□□□□ 0.38
SNCAIP-206ENST00000414317 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms