RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
CPNE1-206ENST00000412056 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
CPNE1-206ENST00000412056 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
CPNE1-206ENST00000412056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
CPNE1-206ENST00000412056 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
CPNE1-206ENST00000412056 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
CPNE1-206ENST00000412056 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
CPNE1-206ENST00000412056 LRP5O75197 1615 aa18.2■□□□□ 0.5
CPNE1-206ENST00000412056 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
CPNE1-206ENST00000412056 SSFA2P28290 1259 aa18.19■□□□□ 0.5
CPNE1-206ENST00000412056 GNAI1P63096 354 aa18.19■□□□□ 0.5
CPNE1-206ENST00000412056 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-206ENST00000412056 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
CPNE1-206ENST00000412056 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-206ENST00000412056 STARD3NLO95772 234 aa18.18■□□□□ 0.5
CPNE1-206ENST00000412056 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
CPNE1-206ENST00000412056 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
CPNE1-206ENST00000412056 MSH5O43196 834 aa18.17■□□□□ 0.5
CPNE1-206ENST00000412056 ZBTB7AO95365 584 aa18.17■□□□□ 0.5
CPNE1-206ENST00000412056 FLAD1Q8NFF5 587 aa18.17■□□□□ 0.5
CPNE1-206ENST00000412056 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-206ENST00000412056 A1BGP04217 495 aa18.16■□□□□ 0.5
CPNE1-206ENST00000412056 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
CPNE1-206ENST00000412056 IL16Q14005 1332 aa18.16■□□□□ 0.5
CPNE1-206ENST00000412056 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
CPNE1-206ENST00000412056 COL15A1P39059 1388 aa18.16■□□□□ 0.5
CPNE1-206ENST00000412056 BCORQ6W2J9 1755 aa18.15■□□□□ 0.5
CPNE1-206ENST00000412056 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-206ENST00000412056 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
CPNE1-206ENST00000412056 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
CPNE1-206ENST00000412056 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
CPNE1-206ENST00000412056 ADRA2BP18089 450 aa18.14■□□□□ 0.49
CPNE1-206ENST00000412056 TRAPPC3LQ5T215 181 aa18.14■□□□□ 0.49
CPNE1-206ENST00000412056 ARHGEF1Q92888 912 aaKnown RBP18.14■□□□□ 0.49
CPNE1-206ENST00000412056 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-206ENST00000412056 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
CPNE1-206ENST00000412056 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
CPNE1-206ENST00000412056 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-206ENST00000412056 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
CPNE1-206ENST00000412056 MSL1Q68DK7 614 aa18.12■□□□□ 0.49
CPNE1-206ENST00000412056 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
CPNE1-206ENST00000412056 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
CPNE1-206ENST00000412056 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-206ENST00000412056 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
CPNE1-206ENST00000412056 RFC4P35249 363 aa18.11■□□□□ 0.49
CPNE1-206ENST00000412056 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
CPNE1-206ENST00000412056 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
CPNE1-206ENST00000412056 SPON1Q9HCB6 807 aa18.11■□□□□ 0.49
CPNE1-206ENST00000412056 SRP68Q9UHB9 627 aaKnown RBP18.11■□□□□ 0.49
CPNE1-206ENST00000412056 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
CPNE1-206ENST00000412056 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
CPNE1-206ENST00000412056 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-206ENST00000412056 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
CPNE1-206ENST00000412056 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-206ENST00000412056 PTGER2P43116 358 aa18.09■□□□□ 0.49
CPNE1-206ENST00000412056 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
CPNE1-206ENST00000412056 C8orf58Q8NAV2 365 aa18.09■□□□□ 0.49
CPNE1-206ENST00000412056 NUP98P52948 1817 aa18.08■□□□□ 0.48
CPNE1-206ENST00000412056 HOXB7P09629 217 aa18.08■□□□□ 0.48
CPNE1-206ENST00000412056 SGIP1Q9BQI5 828 aa18.08■□□□□ 0.48
CPNE1-206ENST00000412056 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 GYS1P13807 737 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 MYL6BP14649 208 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPNE1-206ENST00000412056 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 NARFQ9UHQ1 456 aa18.07■□□□□ 0.48
CPNE1-206ENST00000412056 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 A0A087WZG4 1122 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 ZPR1O75312 459 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 ANXA1P04083 346 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 PDIA6Q15084 440 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 TBC1D2BQ9UPU7 963 aa18.06■□□□□ 0.48
CPNE1-206ENST00000412056 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
CPNE1-206ENST00000412056 NPM2Q86SE8 214 aaKnown RBP18.05■□□□□ 0.48
CPNE1-206ENST00000412056 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
CPNE1-206ENST00000412056 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
CPNE1-206ENST00000412056 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
CPNE1-206ENST00000412056 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
CPNE1-206ENST00000412056 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
CPNE1-206ENST00000412056 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
CPNE1-206ENST00000412056 ARXQ96QS3 562 aa18.04■□□□□ 0.48
CPNE1-206ENST00000412056 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
CPNE1-206ENST00000412056 POLD1P28340 1107 aa18.03■□□□□ 0.48
CPNE1-206ENST00000412056 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
CPNE1-206ENST00000412056 FKBP8Q14318 412 aa18.03■□□□□ 0.48
CPNE1-206ENST00000412056 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-206ENST00000412056 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.48
CPNE1-206ENST00000412056 E9PSI1 815 aa18.02■□□□□ 0.48
CPNE1-206ENST00000412056 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
CPNE1-206ENST00000412056 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
CPNE1-206ENST00000412056 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.47
CPNE1-206ENST00000412056 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
CPNE1-206ENST00000412056 MMP10P09238 476 aa18.01■□□□□ 0.47
CPNE1-206ENST00000412056 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
CPNE1-206ENST00000412056 PPP1R1BQ9UD71 204 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-206ENST00000412056 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms