RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 LRP5O75197 1615 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
TTC39A-207ENST00000411642 MSH5O43196 834 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 SSFA2P28290 1259 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 GNAI1P63096 354 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
TTC39A-207ENST00000411642 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
TTC39A-207ENST00000411642 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
TTC39A-207ENST00000411642 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-207ENST00000411642 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
TTC39A-207ENST00000411642 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
TTC39A-207ENST00000411642 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-207ENST00000411642 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
TTC39A-207ENST00000411642 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
TTC39A-207ENST00000411642 ZBTB7AO95365 584 aa13.1□□□□□ -0.31
TTC39A-207ENST00000411642 CANXP27824 592 aaKnown RBP13.1□□□□□ -0.31
TTC39A-207ENST00000411642 IL16Q14005 1332 aa13.1□□□□□ -0.31
TTC39A-207ENST00000411642 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 A1BGP04217 495 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 ADRA2BP18089 450 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
TTC39A-207ENST00000411642 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-207ENST00000411642 COL15A1P39059 1388 aa13.08□□□□□ -0.31
TTC39A-207ENST00000411642 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
TTC39A-207ENST00000411642 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
TTC39A-207ENST00000411642 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
TTC39A-207ENST00000411642 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
TTC39A-207ENST00000411642 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
TTC39A-207ENST00000411642 RFC4P35249 363 aa13.07□□□□□ -0.32
TTC39A-207ENST00000411642 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-207ENST00000411642 SPON1Q9HCB6 807 aa13.07□□□□□ -0.32
TTC39A-207ENST00000411642 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-207ENST00000411642 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-207ENST00000411642 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
TTC39A-207ENST00000411642 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
TTC39A-207ENST00000411642 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
TTC39A-207ENST00000411642 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
TTC39A-207ENST00000411642 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
TTC39A-207ENST00000411642 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
TTC39A-207ENST00000411642 NUP98P52948 1817 aa13.06□□□□□ -0.32
TTC39A-207ENST00000411642 HOXB7P09629 217 aa13.05□□□□□ -0.32
TTC39A-207ENST00000411642 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
TTC39A-207ENST00000411642 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
TTC39A-207ENST00000411642 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TTC39A-207ENST00000411642 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
TTC39A-207ENST00000411642 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
TTC39A-207ENST00000411642 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
TTC39A-207ENST00000411642 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
TTC39A-207ENST00000411642 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
TTC39A-207ENST00000411642 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
TTC39A-207ENST00000411642 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
TTC39A-207ENST00000411642 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
TTC39A-207ENST00000411642 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
TTC39A-207ENST00000411642 A0A087WZG4 1122 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 ZPR1O75312 459 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 GYS1P13807 737 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 MYL6BP14649 208 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 PTGER2P43116 358 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
TTC39A-207ENST00000411642 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
TTC39A-207ENST00000411642 POLD1P28340 1107 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 ARXQ96QS3 562 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.33
TTC39A-207ENST00000411642 ANXA1P04083 346 aa13.01□□□□□ -0.33
TTC39A-207ENST00000411642 PDIA6Q15084 440 aa13.01□□□□□ -0.33
TTC39A-207ENST00000411642 DZIP3Q86Y13 1208 aaKnown RBP13.01□□□□□ -0.33
TTC39A-207ENST00000411642 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
TTC39A-207ENST00000411642 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-207ENST00000411642 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
TTC39A-207ENST00000411642 E9PSI1 815 aa13□□□□□ -0.33
TTC39A-207ENST00000411642 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
TTC39A-207ENST00000411642 FKBP8Q14318 412 aa13□□□□□ -0.33
TTC39A-207ENST00000411642 PROSER3Q2NL68 480 aa13□□□□□ -0.33
TTC39A-207ENST00000411642 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
TTC39A-207ENST00000411642 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
TTC39A-207ENST00000411642 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
TTC39A-207ENST00000411642 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 MMP10P09238 476 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
TTC39A-207ENST00000411642 DBF4Q9UBU7 674 aaPredicted RBP12.99□□□□□ -0.33
TTC39A-207ENST00000411642 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms