RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 MSL1Q68DK7 614 aa30.91■■■□□ 2.54
R3HCC1-202ENST00000411463 RFC4P35249 363 aa30.89■■■□□ 2.54
R3HCC1-202ENST00000411463 ARXQ96QS3 562 aa30.89■■■□□ 2.54
R3HCC1-202ENST00000411463 MYH14Q7Z406 1995 aaKnown RBP30.89■■■□□ 2.54
R3HCC1-202ENST00000411463 SNRPA1P09661 255 aaKnown RBP30.89■■■□□ 2.53
R3HCC1-202ENST00000411463 ZBTB1Q9Y2K1 713 aa30.89■■■□□ 2.53
R3HCC1-202ENST00000411463 SOS1Q07889 1333 aaPredicted RBP30.86■■■□□ 2.53
R3HCC1-202ENST00000411463 TSPYL4Q9UJ04 414 aa30.86■■■□□ 2.53
R3HCC1-202ENST00000411463 CANXP27824 592 aaKnown RBP30.85■■■□□ 2.53
R3HCC1-202ENST00000411463 BABAM1Q9NWV8 329 aa30.85■■■□□ 2.53
R3HCC1-202ENST00000411463 USP16Q9Y5T5 823 aa30.85■■■□□ 2.53
R3HCC1-202ENST00000411463 PRAMEF22A3QJZ6 481 aa30.84■■■□□ 2.53
R3HCC1-202ENST00000411463 EIF4A1P60842 406 aaKnown RBP30.84■■■□□ 2.53
R3HCC1-202ENST00000411463 COL24A1Q17RW2 1714 aa30.82■■■□□ 2.52
R3HCC1-202ENST00000411463 A1BGP04217 495 aa30.81■■■□□ 2.52
R3HCC1-202ENST00000411463 NLGN1Q8N2Q7 840 aa30.81■■■□□ 2.52
R3HCC1-202ENST00000411463 FHDC1Q9C0D6 1143 aaPredicted RBP30.81■■■□□ 2.52
R3HCC1-202ENST00000411463 KDM3BQ7LBC6 1761 aa30.8■■■□□ 2.52
R3HCC1-202ENST00000411463 COL15A1P39059 1388 aa30.8■■■□□ 2.52
R3HCC1-202ENST00000411463 GYS1P13807 737 aa30.8■■■□□ 2.52
R3HCC1-202ENST00000411463 FAM9BQ8IZU0 186 aa30.8■■■□□ 2.52
R3HCC1-202ENST00000411463 USP42Q9H9J4 1324 aaKnown RBP30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 CHL1O00533 1208 aa30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 GIGYF1O75420 1035 aaPredicted RBP30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 EIF5P55010 431 aaKnown RBP30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 SRP68Q9UHB9 627 aaKnown RBP30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 LAS1LQ9Y4W2 734 aaKnown RBP30.79■■■□□ 2.52
R3HCC1-202ENST00000411463 ZPR1O75312 459 aa30.77■■■□□ 2.52
R3HCC1-202ENST00000411463 IL6STP40189 918 aaPredicted RBP30.77■■■□□ 2.52
R3HCC1-202ENST00000411463 SYT17Q9BSW7 474 aa30.76■■■□□ 2.52
R3HCC1-202ENST00000411463 A0A087WZG4 1122 aa30.76■■■□□ 2.51
R3HCC1-202ENST00000411463 CALD1Q05682 793 aaKnown RBP30.76■■■□□ 2.51
R3HCC1-202ENST00000411463 NARFQ9UHQ1 456 aa30.76■■■□□ 2.51
R3HCC1-202ENST00000411463 ZNF330Q9Y3S2 320 aaPredicted RBP30.76■■■□□ 2.51
R3HCC1-202ENST00000411463 SENP3-EIF4A1A0A087X0R7 540 aa30.75■■■□□ 2.51
R3HCC1-202ENST00000411463 MMP10P09238 476 aa30.75■■■□□ 2.51
R3HCC1-202ENST00000411463 NPM2Q86SE8 214 aaKnown RBP30.75■■■□□ 2.51
R3HCC1-202ENST00000411463 CFAP44Q96MT7 982 aa30.75■■■□□ 2.51
R3HCC1-202ENST00000411463 C4AP0C0L4 1744 aa30.74■■■□□ 2.51
R3HCC1-202ENST00000411463 USPL1Q5W0Q7 1092 aa30.74■■■□□ 2.51
R3HCC1-202ENST00000411463 KLHL34Q8N239 644 aa30.74■■■□□ 2.51
R3HCC1-202ENST00000411463 PIP4K2AP48426 406 aaPredicted RBP30.73■■■□□ 2.51
R3HCC1-202ENST00000411463 FKBP8Q14318 412 aa30.72■■■□□ 2.51
R3HCC1-202ENST00000411463 CCDC27Q2M243 656 aa30.72■■■□□ 2.51
R3HCC1-202ENST00000411463 DIEXFQ68CQ4 756 aaKnown RBP30.71■■■□□ 2.51
R3HCC1-202ENST00000411463 NBPF26B4DH59 902 aa30.7■■■□□ 2.51
R3HCC1-202ENST00000411463 NCBP3Q53F19 620 aaKnown RBP30.7■■■□□ 2.51
R3HCC1-202ENST00000411463 NBPF10Q6P3W6 841 aaKnown RBP30.7■■■□□ 2.51
R3HCC1-202ENST00000411463 NBPF15Q8N660 670 aa30.7■■■□□ 2.51
R3HCC1-202ENST00000411463 IFT57Q9NWB7 429 aa30.7■■■□□ 2.5
R3HCC1-202ENST00000411463 CCER2I3L3R5 266 aa30.69■■■□□ 2.5
R3HCC1-202ENST00000411463 ZNF853P0CG23 659 aa30.69■■■□□ 2.5
R3HCC1-202ENST00000411463 GNAI1P63096 354 aa30.69■■■□□ 2.5
R3HCC1-202ENST00000411463 TBC1D2BQ9UPU7 963 aa30.69■■■□□ 2.5
R3HCC1-202ENST00000411463 WWC1Q8IX03 1113 aa30.68■■■□□ 2.5
R3HCC1-202ENST00000411463 MBIPQ9NS73 344 aa30.68■■■□□ 2.5
R3HCC1-202ENST00000411463 BCL2L12Q9HB09 334 aa30.66■■■□□ 2.5
R3HCC1-202ENST00000411463 PARP3Q9Y6F1 533 aa30.66■■■□□ 2.5
R3HCC1-202ENST00000411463 DZIP3Q86Y13 1208 aaKnown RBP30.65■■■□□ 2.5
R3HCC1-202ENST00000411463 CD2APQ9Y5K6 639 aa30.65■■■□□ 2.5
R3HCC1-202ENST00000411463 KRT24Q2M2I5 525 aa30.64■■■□□ 2.5
R3HCC1-202ENST00000411463 LAMB4A4D0S4 1761 aa30.64■■■□□ 2.49
R3HCC1-202ENST00000411463 EIF2S2P20042 333 aaKnown RBP30.63■■■□□ 2.49
R3HCC1-202ENST00000411463 TM4SF1P30408 202 aa30.63■■■□□ 2.49
R3HCC1-202ENST00000411463 SALL2Q9Y467 1007 aaPredicted RBP30.63■■■□□ 2.49
R3HCC1-202ENST00000411463 ERBB4Q15303 1308 aa30.62■■■□□ 2.49
R3HCC1-202ENST00000411463 DDR1Q08345 913 aa30.62■■■□□ 2.49
R3HCC1-202ENST00000411463 NLGN2Q8NFZ4 835 aa30.62■■■□□ 2.49
R3HCC1-202ENST00000411463 CAMTA2O94983 1202 aa30.61■■■□□ 2.49
R3HCC1-202ENST00000411463 NFIXQ14938 502 aa30.61■■■□□ 2.49
R3HCC1-202ENST00000411463 MYL6BP14649 208 aa30.6■■■□□ 2.49
R3HCC1-202ENST00000411463 NGEFQ8N5V2 710 aa30.59■■■□□ 2.49
R3HCC1-202ENST00000411463 POLRMTO00411 1230 aaKnown RBP30.58■■■□□ 2.49
R3HCC1-202ENST00000411463 HOXB7P09629 217 aa30.58■■■□□ 2.49
R3HCC1-202ENST00000411463 DCAF8L1A6NGE4 600 aa30.57■■■□□ 2.48
R3HCC1-202ENST00000411463 IL16Q14005 1332 aa30.57■■■□□ 2.48
R3HCC1-202ENST00000411463 DUSP27Q5VZP5 1158 aa30.57■■■□□ 2.48
R3HCC1-202ENST00000411463 BICDL1Q6ZP65 573 aa30.57■■■□□ 2.48
R3HCC1-202ENST00000411463 NECTIN2Q92692 538 aa30.57■■■□□ 2.48
R3HCC1-202ENST00000411463 PDIA6Q15084 440 aa30.56■■■□□ 2.48
R3HCC1-202ENST00000411463 TBC1D9BQ66K14 1250 aa30.56■■■□□ 2.48
R3HCC1-202ENST00000411463 WDR63Q8IWG1 891 aa30.56■■■□□ 2.48
R3HCC1-202ENST00000411463 MIER1Q8N108 512 aa30.56■■■□□ 2.48
R3HCC1-202ENST00000411463 CLEC4GQ6UXB4 293 aa30.55■■■□□ 2.48
R3HCC1-202ENST00000411463 HDGFL1Q5TGJ6 251 aa30.54■■■□□ 2.48
R3HCC1-202ENST00000411463 ZNF652Q9Y2D9 606 aa30.54■■■□□ 2.48
R3HCC1-202ENST00000411463 SCN7AQ01118 1682 aa30.54■■■□□ 2.48
R3HCC1-202ENST00000411463 RGL2O15211 777 aa30.53■■■□□ 2.48
R3HCC1-202ENST00000411463 TSR2Q969E8 191 aaKnown RBP30.53■■■□□ 2.48
R3HCC1-202ENST00000411463 C10orf71Q711Q0 1435 aa30.53■■■□□ 2.48
R3HCC1-202ENST00000411463 SERPINB2P05120 415 aa30.52■■■□□ 2.48
R3HCC1-202ENST00000411463 ELL2O00472 640 aaPredicted RBP30.51■■■□□ 2.48
R3HCC1-202ENST00000411463 PROSER3Q2NL68 480 aa30.51■■■□□ 2.48
R3HCC1-202ENST00000411463 KIF6Q6ZMV9 814 aa30.51■■■□□ 2.48
R3HCC1-202ENST00000411463 LRP10Q7Z4F1 713 aa30.51■■■□□ 2.48
R3HCC1-202ENST00000411463 ANXA1P04083 346 aa30.5■■■□□ 2.47
R3HCC1-202ENST00000411463 TTLL7Q6ZT98 887 aa30.5■■■□□ 2.47
R3HCC1-202ENST00000411463 C8orf58Q8NAV2 365 aa30.5■■■□□ 2.47
R3HCC1-202ENST00000411463 SETDB2Q96T68 719 aa30.5■■■□□ 2.47
R3HCC1-202ENST00000411463 DDX21Q9NR30 783 aaKnown RBP eCLIP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms